HHsearch alignment for GI: 254780655 and conserved domain: COG3959

>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism].
Probab=100.00  E-value=0  Score=504.29  Aligned_cols=237  Identities=38%  Similarity=0.622  Sum_probs=226.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             88889999999999999999997388976431368999999843325445778988788779985652018999999970
Q gi|254780655|r   14 KYDDDYKKMADAIRFLSMDAIENVNSGHPGLPMGMADVVTALFTQCMVFDPQCPYWPNRDRFVLSAGHGSMLYYALLYLL   93 (673)
Q Consensus        14 ~~~~~l~~~a~~iR~~~~~~v~~a~~GH~g~~l~~~el~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~s~~~Y~~~~l~   93 (673)
T Consensus         5 ~~~~~L~~~A~~iRr~~v~m~~~~~~GH~G~SLS~~eILa~LYf~~m~~~p~~p~~~~RDrfiLSKGHaa~AlYa~Lae~   84 (243)
T COG3959           5 LSVDELERIAREIRRNIVRMLANAGSGHVGGSLSVVEILAVLYFKIMNIDPDDPKWPGRDRFILSKGHAAPALYATLAEK   84 (243)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHC
T ss_conf             22799999999999999998632678875762109999999999872668788877777769983664138999999981


Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
Q ss_conf             76889988986400038879889888899873068886314799999999999985342688767845999843621143
Q gi|254780655|r   94 GYQDVTIEDIKNFRTIGSKTAGHPEYGSCAGIEATTGPLGQGIANAVGMAIAERKLREEFGDVLIDHYTYVLVGDGCLME  173 (673)
Q Consensus        94 G~~~~~~e~l~~~r~~~s~~~Ghpe~~~~~~v~~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~v~~iiGDG~l~e  173 (673)
T Consensus        85 G~--~p~eeL~~~~~~~srL~~Hp~~~~~pgve~stGSLGqGLsvavGmAlg~kl~~~-------~~~VyvilGDGEl~E  155 (243)
T COG3959          85 GY--FPEEELETFRRIGSRLPGHPERNKTPGVEVSTGSLGQGLSVAVGMALGAKLKGS-------PYRVYVILGDGELDE  155 (243)
T ss_pred             CC--CCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCC-------CCEEEEEECCCCCCC
T ss_conf             89--888999975168985889976578986562687655661078888888765289-------844999955754366


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC-CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCHH
Q ss_conf             44557887652202233069996276322322355678-217998864144444444440678888888751102-2102
Q gi|254780655|r  174 GISQEAISFAGHLGLSKLIVLWDNNGISIDGPISLADS-TDQYARFRASGWNTLSVNGHDHHAITSTLRKAQLSD-KPTM  251 (673)
Q Consensus       174 G~~~EAl~~A~~~~l~nli~i~d~N~~si~~~~~~~~~-~~~~~~~~a~Gw~~~~vdG~d~~~i~~a~~~ak~~~-kP~~  251 (673)
T Consensus       156 G~~WEAam~Aah~~L~NLiaivD~N~~QldG~t~~i~~~~pL~~k~eAFGw~V~evdG~d~~~i~~a~~~~~~~~~rP~~  235 (243)
T COG3959         156 GQVWEAAMTAAHYKLDNLIAIVDRNKLQLDGETEEIMPKEPLADKWEAFGWEVIEVDGHDIEEIVEALEKAKGSKGRPTV  235 (243)
T ss_pred             CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEE
T ss_conf             52799999998705376799994587424776543268520078888438068997584799999999841135899869


Q ss_pred             HHHCCCCC
Q ss_conf             22013345
Q gi|254780655|r  252 IACETVIG  259 (673)
Q Consensus       252 I~~~T~kG  259 (673)
T Consensus       236 IIa~Tvkg  243 (243)
T COG3959         236 IIAKTVKG  243 (243)
T ss_pred             EEEECCCC
T ss_conf             99735659