HHsearch alignment for GI: 254780655 and conserved domain: PRK06154
>PRK06154 hypothetical protein; Provisional.
Probab=94.73 E-value=0.07 Score=32.67 Aligned_cols=120 Identities=16% Similarity=0.166 Sum_probs=51.5
Q ss_pred CCCCCCHHHCCCCCCCH--HHHHHHHHHHHHCCCCCCEECCC--HHHHHHHHHHHHHHHHHHCCCEEECCCC-CCCC---
Q ss_conf 45432001003257620--02356787998728876220010--0355530012454111100001302454-3333---
Q gi|254780655|r 405 ISKSDFSGRYLHYGVRE--HAMAAAMNGIALHKGLAPYSGTF--MVFSDYSRPAIRLASLMGIRVIHVLTHD-SIGL--- 476 (673)
Q Consensus 405 ~~~~~~p~r~i~~GIaE--~~~~~~aaGla~~~g~~p~~~tf--~~F~~~~~~~ir~~al~~~~v~~v~th~-gi~~--- 476 (673)
T Consensus 406 ~~~~~~p~~~~~~g~~g~mG~glpaAiGa~lA~p~~~Vv~i~GDGsf~m-~~qEL~Ta~r~~lpv~viV~NN~~~g~~~~ 484 (556)
T PRK06154 406 FYRARRPGSYLGWGKTTQLGYGLGLAMGAKLARPDALVANLLGDAAFGE-CGMDFETAVRNRIPTVTILLNNGCMGGYDK 484 (556)
T ss_pred HHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHH-HHHHHHHHHHHCCCCEEEEEECCHHHHHHH
T ss_conf 5303788844047987744540699999997389993899987379887-799999999949997899996806389998
Q ss_pred --CCCCCHHHHCC----CCCHHHHHCCCCEEEECCHHHHHHHHHHHHCC--CCCCEEE
Q ss_conf --33331010002----22101110122112112012457777652025--6783499
Q gi|254780655|r 477 --GEDGPTHQPVE----HLAALRAIPDLLVLRPADSIETLECWQVALKE--KNRPSVL 526 (673)
Q Consensus 477 --G~DGpTHq~ie----dia~lr~iPnl~v~~P~d~~E~~~~~~~al~~--~~gP~~i 526 (673)
T Consensus 485 ~~~~~~~-~~~~~~~~~Df~~lA~a~G~~g~~V~~~~el~~Al~~A~~~~~~g~P~lI 541 (556)
T PRK06154 485 HMPLSTT-KYRTRFLSGDYAMIARALGGYTERVEDPERLVPALRRAARKAKTGRPALL 541 (556)
T ss_pred HHHHHCC-CCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 8675067-66787589999999997799799979999999999999854889983999