HHsearch alignment for GI: 254780655 and conserved domain: PRK06276

Probab=99.05  E-value=6.8e-10  Score=90.67  Aligned_cols=123  Identities=15%  Similarity=0.146  Sum_probs=57.9

Q ss_pred             CCCCCCHHHCCCC-CCCHHH-HHHHHHHHHHCCCCCCEECCC--HHHHHHHHHHHHHHHHHHCCCEEEC-CCCCCCC---
Q ss_conf             4543200100325-762002-356787998728876220010--0355530012454111100001302-4543333---
Q gi|254780655|r  405 ISKSDFSGRYLHY-GVREHA-MAAAMNGIALHKGLAPYSGTF--MVFSDYSRPAIRLASLMGIRVIHVL-THDSIGL---  476 (673)
Q Consensus       405 ~~~~~~p~r~i~~-GIaE~~-~~~~aaGla~~~g~~p~~~tf--~~F~~~~~~~ir~~al~~~~v~~v~-th~gi~~---  476 (673)
T Consensus       403 ~~~~~~p~~~~~~~g~GsmG~glpaAiGA~lA~pdr~Vv~i~GDGsf~m-~~qEL~Tavr~~lpv~ivV~NN~~yg~i~~  481 (586)
T PRK06276        403 YFQTSAPRSFISSGGLGTMGFGFPAAIGAKVARPDANVIAVTGDGGFLM-NSQELATIAEYDIPVIVVIFDNRTLGMVYQ  481 (586)
T ss_pred             HHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHH-HHHHHHHHHHHCCCCEEEEEECCCCHHHHH
T ss_conf             4115899838606887775454799999998589996899988568755-099999999978894899997872059999


Q ss_pred             CC----C---CCHHHH-CCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             33----3---310100-02221011101221121120124577776520256783499952
Q gi|254780655|r  477 GE----D---GPTHQP-VEHLAALRAIPDLLVLRPADSIETLECWQVALKEKNRPSVLSLS  529 (673)
Q Consensus       477 G~----D---GpTHq~-iedia~lr~iPnl~v~~P~d~~E~~~~~~~al~~~~gP~~ir~~  529 (673)
T Consensus       482 ~q~~~~~~~~~~~~~~~~pDf~~lA~a~G~~g~rV~~~~el~~Al~~A~~~-~gP~lIeV~  541 (586)
T PRK06276        482 WQNLYYGKRQSAVHLGETPDFVKLAESYGVDALRIEKPGEINEALKTAINS-GEPYLLDII  541 (586)
T ss_pred             HHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCCEEEEEE
T ss_conf             999862886665667999999999997799799979999999999999808-997899999