HHsearch alignment for GI: 254780655 and conserved domain: TIGR00118

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type; InterPro: IPR012846 Two groups of proteins form acetolactate from two molecules of pyruvate. The type of acetolactate synthase described in this entry also catalyzes the formation of acetohydroxybutyrate from pyruvate and 2-oxobutyrate, an early step in the branched chain amino acid biosynthesis; it is therefore also termed acetohydroxyacid synthase. In bacteria, this catalytic chain is associated with a smaller regulatory chain in an alpha2/beta2 heterotetramer. Acetolactate synthase is a thiamine pyrophosphate enzyme. In this type, FAD and Mg++ are also found. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.; GO: 0000287 magnesium ion binding, 0003984 acetolactate synthase activity, 0030976 thiamin pyrophosphate binding, 0050660 FAD binding, 0009082 branched chain family amino acid biosynthetic process.
Probab=98.26  E-value=2e-06  Score=65.54  Aligned_cols=394  Identities=20%  Similarity=0.262  Sum_probs=183.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf             97643136899999984332544577898878877998565201899999997076889988986400038879889888
Q gi|254780655|r   40 GHPGLPMGMADVVTALFTQCMVFDPQCPYWPNRDRFVLSAGHGSMLYYALLYLLGYQDVTIEDIKNFRTIGSKTAGHPEY  119 (673)
Q Consensus        40 GH~g~~l~~~el~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~s~~~Y~~~~l~G~~~~~~e~l~~~r~~~s~~~Ghpe~  119 (673)
T Consensus        21 GYPGGA~--LpiYD~Ly~----fe~~s-----~~~HIL~RHEQg---A~H-aADGYA-----------R----AsG----   66 (593)
T TIGR00118        21 GYPGGAI--LPIYDALYR----FETDS-----GIEHILVRHEQG---AVH-AADGYA-----------R----ASG----   66 (593)
T ss_pred             CCCCCCH--HHHHHHHHC----CCCCC-----CCEEECCCHHHH---HHH-HHCCCE-----------E----CCC----
T ss_conf             4898643--567766503----01268-----832721672557---645-423440-----------0----158----


Q ss_pred             CCCCCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHCCCCCCCCEEE-EEECCCCCCCHHH---------------------
Q ss_conf             89987306888631479999-999999998534268876784599-9843621143445---------------------
Q gi|254780655|r  120 GSCAGIEATTGPLGQGIANA-VGMAIAERKLREEFGDVLIDHYTY-VLVGDGCLMEGIS---------------------  176 (673)
Q Consensus       120 ~~~~~v~~~tG~lG~gis~a-~G~A~a~k~~~~~~~~~~~d~~v~-~iiGDG~l~eG~~---------------------  176 (673)
T Consensus        67 -k-vGVv~~T--SGPGATN~VTGiAtA--y~DS~-P~Vv~tGQV~t~~IG~DAFQE~D~~GIt~PitKHsf~V~~~edlp  139 (593)
T TIGR00118        67 -K-VGVVLAT--SGPGATNLVTGIATA--YMDSV-PLVVFTGQVPTSLIGSDAFQEADILGITMPITKHSFQVKSAEDLP  139 (593)
T ss_pred             -C-EEEEEEE--CCCCCHHHHHHHHHH--HHCCC-CEEEECCCHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHH
T ss_conf             -3-0289860--798723356567775--42576-537751760001013750000011134666567530025878999


Q ss_pred             ---HHHHHHHHHHCCCCEEEEEEC--------CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHH------HHHHH
Q ss_conf             ---578876522022330699962--------7632232235567821799886414444444444067------88888
Q gi|254780655|r  177 ---QEAISFAGHLGLSKLIVLWDN--------NGISIDGPISLADSTDQYARFRASGWNTLSVNGHDHH------AITST  239 (673)
Q Consensus       177 ---~EAl~~A~~~~l~nli~i~d~--------N~~si~~~~~~~~~~~~~~~~~a~Gw~~~~vdG~d~~------~i~~a  239 (673)
T Consensus       140 ~~~~~AF~IA~TGRPGPVlv--DlPKDv~~~~~~~~~~~P~~v~--------LPgY~---P~~~Gh~~Qdefv~qsI~kA  206 (593)
T TIGR00118       140 RIIKEAFHIATTGRPGPVLV--DLPKDVTTAEIEFPYDDPEKVN--------LPGYK---PTVEGHPLQDEFVMQSIKKA  206 (593)
T ss_pred             HHHHHHHHHHCCCCCCCEEE--ECCCCCCCHHHCCCCCCCCEEE--------CCCCC---CCCCCCCCHHHHHHHHHHHH
T ss_conf             99998776432766688278--5884224333326788886000--------78878---88898831457899999999


Q ss_pred             HHHHHHCCCCH-------------------------HHHHCCCCCCCCCCCCCCCC------CCCC-----CCCHHHH--
Q ss_conf             88751102210-------------------------22201334555700047711------0334-----3722332--
Q gi|254780655|r  240 LRKAQLSDKPT-------------------------MIACETVIGFGSPNRAGTNK------VHGS-----ALGQEEI--  281 (673)
Q Consensus       240 ~~~ak~~~kP~-------------------------~I~~~T~kG~G~~~~e~~~~------~HG~-----~l~~ee~--  281 (673)
T Consensus       207 ~~li~~AkkPVilvGGGvin~a~as~~L~elae~~~~PV~tTLmGlG~-FP~~Hp~~LGMlGMHGt~~AN~Av~EcDllI  285 (593)
T TIGR00118       207 AELIEKAKKPVILVGGGVINIAGASEELKELAERLQIPVTTTLMGLGS-FPEDHPLSLGMLGMHGTKTANLAVHECDLLI  285 (593)
T ss_pred             HHHHHHHCCCEEEECCHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCC-CCCCCHHHHCCCCCHHHHHHHHHHHHCCEEE
T ss_conf             999997269779864135420554079999985407760010156788-7846835503567657888732542053214


Q ss_pred             ------------------HHHH--------HHCCCCCCCCCCC-------------HHHHHHHHHH-HHH----HHHHHH
Q ss_conf             ------------------1256--------6348777854389-------------7899999975-433----356688
Q gi|254780655|r  282 ------------------KATR--------KALNWDLDPFFIP-------------DDIMKKWRLA-GLR----SSQTRA  317 (673)
Q Consensus       282 ------------------~~~~--------k~lg~~~~~f~ip-------------~~v~~~~~~~-~~~----~~~~~~  317 (673)
T Consensus       286 AvG~RFdDRvTGnl~~FAp~AkraaaeGrGGiiHiDIDPaeIgK~v~~diPiVGDAr~VL~~ll~~~~~~~~~~~~~~~~  365 (593)
T TIGR00118       286 AVGARFDDRVTGNLAKFAPNAKRAAAEGRGGIIHIDIDPAEIGKNVRVDIPIVGDARNVLEELLKKLEKEKALKERSEEQ  365 (593)
T ss_pred             EEEEEECCCCCCCHHHHCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             53000056634877672316567541478736999853765577114640103675899999999987630356722488


Q ss_pred             HHHHHHHHHHHHHHHC-CCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HHHCCCCCCC
Q ss_conf             7642467631111100-23001110776302355542000001355431013467888998865543---3220345556
Q gi|254780655|r  318 DWQERLSSMKSSIRKE-FERRFSDALPDCFDNAFINLKKKFEHSKPMIATRKSSELVLEVVNDCLPE---LIGGSADLTG  393 (673)
Q Consensus       318 ~w~~~~~~~~~~~~~e-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vatr~a~g~~l~~i~~~~p~---iv~~sADl~~  393 (673)
T Consensus       366 ~W~~~i~~Wk~~~~l~Y~~~~~~~ki------------------K--------PQ~vi~~~~~~~~~~~~~aivTTDV-G  418 (593)
T TIGR00118       366 AWLEQINKWKKEYPLAYMDYTEEGKI------------------K--------PQQVIEEISRVTKDIGREAIVTTDV-G  418 (593)
T ss_pred             HHHHHHHHHHHHCCHHHCCCCCCCCC------------------C--------CHHHHHHHHHHCCCCCCCEEEECCC-C
T ss_conf             99999999876147312466788853------------------6--------0799999999627888536897277-7


Q ss_pred             CCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHH--HH----CCCCCCEE-----CCCHHHHHHHHHHHHHHHHHH
Q ss_conf             74000266634454320010032576200235678799--87----28876220-----010035553001245411110
Q gi|254780655|r  394 SNGTKTSQMKAISKSDFSGRYLHYGVREHAMAAAMNGI--AL----HKGLAPYS-----GTFMVFSDYSRPAIRLASLMG  462 (673)
Q Consensus       394 St~~~~~~~~~~~~~~~p~r~i~~GIaE~~~~~~aaGl--a~----~~g~~p~~-----~tf~~F~~~~~~~ir~~al~~  462 (673)
T Consensus       419 QhQ-MW--aA~fy~~~~Pr~fI~SG----GLGTMGFGlPAAiGAkvA~pe~~Vi~i~GDGsF~Mn~QE----L~t~~~y~  487 (593)
T TIGR00118       419 QHQ-MW--AAQFYPFKKPRKFITSG----GLGTMGFGLPAAIGAKVAKPEETVICITGDGSFQMNLQE----LSTIVQYD  487 (593)
T ss_pred             HHH-HH--HHHHCCCCCCCCEECCC----CCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCHHHH----HHHHHHCC
T ss_conf             347-88--98615777886413137----763110102688600004788664787538732123467----88998718


Q ss_pred             CCCEEEC-CCCCCCCC------------CCCCHHHHC--CCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCCC--CCCEE
Q ss_conf             0001302-45433333------------333101000--2221011101221121120124577776520256--78349
Q gi|254780655|r  463 IRVIHVL-THDSIGLG------------EDGPTHQPV--EHLAALRAIPDLLVLRPADSIETLECWQVALKEK--NRPSV  525 (673)
Q Consensus       463 ~~v~~v~-th~gi~~G------------~DGpTHq~i--edia~lr~iPnl~v~~P~d~~E~~~~~~~al~~~--~gP~~  525 (673)
T Consensus       488 iPV~i~iLNN~~--LGMV~QWQ~lfY~~RyS~t~~~~~~PDF~kLAEayG~~G~ri~~~~E~~~kL~Ea~~~~r~n~Pv~  565 (593)
T TIGR00118       488 IPVKIVILNNRY--LGMVRQWQELFYEERYSETHMGSELPDFVKLAEAYGIKGIRIEKPEELDEKLKEALESKRNNEPVL  565 (593)
T ss_pred             CCEEEEEECCCC--CCHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             964999845896--560488888752110235763068942899998729502554788779999999986146888469


Q ss_pred             EEE
Q ss_conf             995
Q gi|254780655|r  526 LSL  528 (673)
Q Consensus       526 ir~  528 (673)
T Consensus       566 ~Dv  568 (593)
T TIGR00118       566 LDV  568 (593)
T ss_pred             EEE
T ss_conf             999