HHsearch alignment for GI: 254780655 and conserved domain: TIGR03182
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc.
Probab=99.87 E-value=1.6e-19 Score=160.37 Aligned_cols=131 Identities=24% Similarity=0.312 Sum_probs=113.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 73068886314799999999999985342688767845999843621143445578876522022330699962763223
Q gi|254780655|r 124 GIEATTGPLGQGIANAVGMAIAERKLREEFGDVLIDHYTYVLVGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISID 203 (673)
Q Consensus 124 ~v~~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~v~~iiGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~ 203 (673)
T Consensus 104 ~~~~~~~ivg~~~p~A~G~A~a~k~~~~-------~~v~v~~~GDGa~~~G~f~EalN~A~~~~l-Pvifv~eNN~yais 175 (315)
T TIGR03182 104 NFYGGHGIVGAQVPLATGLAFANKYRGN-------DNVTACFFGDGAANQGQFYESFNMAALWKL-PVIFVIENNLYAMG 175 (315)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCC-------CCEEEEEECCCCCCCCHHHHHHHHHHCCCC-CEEEEEEECCCCCC
T ss_conf 7778873040374387769999986089-------987999957886653439999988741489-88999952874155
Q ss_pred CCCCCCCCC-CHHHHHHHCCCCCCCCCCCCHHHHHHHHH----HHHHCCCCHHHHHCCCCCCCC
Q ss_conf 223556782-17998864144444444440678888888----751102210222013345557
Q gi|254780655|r 204 GPISLADST-DQYARFRASGWNTLSVNGHDHHAITSTLR----KAQLSDKPTMIACETVIGFGS 262 (673)
Q Consensus 204 ~~~~~~~~~-~~~~~~~a~Gw~~~~vdG~d~~~i~~a~~----~ak~~~kP~~I~~~T~kG~G~ 262 (673)
T Consensus 176 t~~~~~~~~~~i~~ra~~~gi~~~~vDGnD~~av~~~~~~Ai~~~R~g~gP~lie~~tyR~~gH 239 (315)
T TIGR03182 176 TSVERSSSVTDLYKRGESFGIPGERVDGMDVLAVREAAKEAVERARSGKGPILLEMKTYRFRGH 239 (315)
T ss_pred CCHHHHCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
T ss_conf 7677753663366655436998589835778999999999999975599988999874268888