HHsearch alignment for GI: 254780655 and conserved domain: cd02012

>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.
Probab=100.00  E-value=0  Score=561.24  Aligned_cols=253  Identities=48%  Similarity=0.791  Sum_probs=240.9

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             99999999999973889764313689999998433254457789887887799856520189999999707688998898
Q gi|254780655|r   24 DAIRFLSMDAIENVNSGHPGLPMGMADVVTALFTQCMVFDPQCPYWPNRDRFVLSAGHGSMLYYALLYLLGYQDVTIEDI  103 (673)
Q Consensus        24 ~~iR~~~~~~v~~a~~GH~g~~l~~~el~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~s~~~Y~~~~l~G~~~~~~e~l  103 (673)
T Consensus         1 ~~iR~~il~~v~~~~~GH~g~~lS~vei~~aLy~~~~~~~~~~~~~~~rDr~ilskGH~~~~~Ya~l~~~G~--~~~~~L   78 (255)
T cd02012           1 NRIRRLSIDMVQKAGSGHPGGSLSAADILAVLYFKVLKYDPADPKWPNRDRFVLSKGHASPALYAVLALAGY--LPEEDL   78 (255)
T ss_pred             CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CCHHHH
T ss_conf             958999999999729984036779999999999877424878999878885999662068999999999489--988998


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf             64000388798898888998730688863147999999999999853426887678459998436211434455788765
Q gi|254780655|r  104 KNFRTIGSKTAGHPEYGSCAGIEATTGPLGQGIANAVGMAIAERKLREEFGDVLIDHYTYVLVGDGCLMEGISQEAISFA  183 (673)
Q Consensus       104 ~~~r~~~s~~~Ghpe~~~~~~v~~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~v~~iiGDG~l~eG~~~EAl~~A  183 (673)
T Consensus        79 ~~~~~~gs~l~ghp~~~~~~gi~~stGsLG~gls~a~G~A~a~k~~~~-------~~~v~~~iGDGel~EG~~wEAl~~A  151 (255)
T cd02012          79 KTFRQLGSRLPGHPEYGLTPGVEVTTGSLGQGLSVAVGMALAEKLLGF-------DYRVYVLLGDGELQEGSVWEAASFA  151 (255)
T ss_pred             HHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCC-------CCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf             414579997899999899999651787537789999999999986288-------8717999425110331289999998


Q ss_pred             HHHCCCCEEEEEECCCCCCCCCCCCCCC-CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCHHHHHCCCCCCC
Q ss_conf             2202233069996276322322355678-21799886414444444444067888888875110-221022201334555
Q gi|254780655|r  184 GHLGLSKLIVLWDNNGISIDGPISLADS-TDQYARFRASGWNTLSVNGHDHHAITSTLRKAQLS-DKPTMIACETVIGFG  261 (673)
Q Consensus       184 ~~~~l~nli~i~d~N~~si~~~~~~~~~-~~~~~~~~a~Gw~~~~vdG~d~~~i~~a~~~ak~~-~kP~~I~~~T~kG~G  261 (673)
T Consensus       152 ~~~~L~nLi~ivD~N~~~~~g~~~~~~~~~~l~~~~~sfG~~v~~vdGhd~~~i~~a~~~a~~~~~kP~~I~~~T~KGkG  231 (255)
T cd02012         152 GHYKLDNLIAIVDSNRIQIDGPTDDILFTEDLAKKFEAFGWNVIEVDGHDVEEILAALEEAKKSKGKPTLIIAKTIKGKG  231 (255)
T ss_pred             HHCCCCCEEEEECCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
T ss_conf             55587756999868982625603025476889999996698111017999999999999998679995899999651148


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             700047711033437223321256
Q gi|254780655|r  262 SPNRAGTNKVHGSALGQEEIKATR  285 (673)
Q Consensus       262 ~~~~e~~~~~HG~~l~~ee~~~~~  285 (673)
T Consensus       232 ~~~~E~~~~~H~~~~~~~e~~~a~  255 (255)
T cd02012         232 VPFMENTAKWHGKPLGEEEVELAK  255 (255)
T ss_pred             CCHHCCCCCCCCCCCCHHHHHHHC
T ss_conf             823219972006999989999629