Query gi|254780657|ref|YP_003065070.1| hypothetical protein CLIBASIA_02720 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 61
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Wed Jun 1 14:46:32 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780657.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2o8p_A 14-3-3 domain containi 22.9 27 0.00081 16.9 0.6 14 17-30 47-60 (113)
2 >2j01_N 50S ribosomal protein 20.3 25 0.00073 17.2 -0.0 13 34-46 15-27 (29)
3 >3efz_A 14-3-3 protein; 14-3-3 16.4 46 0.0014 15.7 0.6 13 17-29 63-75 (133)
4 >2c1n_A 14-3-3 protein zeta/de 15.8 51 0.0015 15.5 0.7 16 17-32 53-68 (120)
5 >2o02_A 14-3-3 protein zeta/de 15.4 53 0.0016 15.4 0.7 17 17-33 40-56 (107)
6 >1o9d_A 14-3-3-like protein C; 13.4 62 0.0018 15.0 0.6 14 17-30 47-60 (116)
7 >2br9_A 14-3-3E, 14-3-3 protei 13.1 64 0.0019 15.0 0.6 14 17-30 42-55 (111)
8 >1ukf_A Avirulence protein AVR 12.7 48 0.0014 15.6 -0.1 40 14-53 107-146 (188)
9 >1dxs_A P53-like transcription 12.6 68 0.002 14.8 0.6 26 18-45 28-53 (80)
10 >1rg6_A Second splice variant 12.0 74 0.0022 14.6 0.7 26 17-44 28-53 (75)
No 1
>>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, structural genomics, structural genomics consortium; HET: MSE; 1.82A {Cryptosporidium parvum} (A:1-113)
Probab=22.92 E-value=27 Score=16.94 Aligned_cols=14 Identities=36% Similarity=0.484 Sum_probs=11.1
Q ss_pred HHHHCCHHHHHHHH
Q ss_conf 87522678775431
Q gi|254780657|r 17 ARNLLSPAYRHMKS 30 (61)
Q Consensus 17 arnllspayrhmks 30 (61)
-|||||-||.+.-+
T Consensus 47 ERnLLSvAYKNvvg 60 (113)
T 2o8p_A 47 ERHLLTLCIKHKIS 60 (113)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999988764
No 2
>>2j01_N 50S ribosomal protein L13; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} (N:64-92)
Probab=20.28 E-value=25 Score=17.16 Aligned_cols=13 Identities=62% Similarity=0.654 Sum_probs=9.4
Q ss_pred HHHCCCCCCCCCC
Q ss_conf 5404222755113
Q gi|254780657|r 34 ADLGAKKIPLEKK 46 (61)
Q Consensus 34 adlgakkiplekk 46 (61)
-.-|-|+||+||-
T Consensus 15 y~gglk~ip~ekm 27 (29)
T 2j01_N 15 YPGGLKKIPLEKM 27 (29)
T ss_dssp SSSCCCCCBHHHH
T ss_pred CCCCCCCCCHHHH
T ss_conf 5676555557776
No 3
>>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genomics, structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} (A:1-133)
Probab=16.38 E-value=46 Score=15.71 Aligned_cols=13 Identities=23% Similarity=0.117 Sum_probs=10.2
Q ss_pred HHHHCCHHHHHHH
Q ss_conf 8752267877543
Q gi|254780657|r 17 ARNLLSPAYRHMK 29 (61)
Q Consensus 17 arnllspayrhmk 29 (61)
.|||||-||...-
T Consensus 63 ERNLLSVAYKNvI 75 (133)
T 3efz_A 63 LILLLAGSLRNRV 75 (133)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999986653
No 4
>>2c1n_A 14-3-3 protein zeta/delta; signaling protein/complex, phosphorylation, 14-3-3, acetylation, nucleosome, signaling protein; HET: SEP; 2.0A {Homo sapiens} (A:1-120)
Probab=15.75 E-value=51 Score=15.47 Aligned_cols=16 Identities=44% Similarity=0.632 Sum_probs=12.4
Q ss_pred HHHHCCHHHHHHHHCC
Q ss_conf 8752267877543101
Q gi|254780657|r 17 ARNLLSPAYRHMKSIS 32 (61)
Q Consensus 17 arnllspayrhmksis 32 (61)
.|||||-||.++-+..
T Consensus 53 ERnLLSvaYKn~ig~r 68 (120)
T 2c1n_A 53 ERNLLSVAYKNVVGAR 68 (120)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999746079
No 5
>>2o02_A 14-3-3 protein zeta/delta; 14-3-3, adapter protein, pathogen, protein binding/toxin complex; 1.50A {Homo sapiens} (A:1-107)
Probab=15.45 E-value=53 Score=15.40 Aligned_cols=17 Identities=41% Similarity=0.552 Sum_probs=12.5
Q ss_pred HHHHCCHHHHHHHHCCH
Q ss_conf 87522678775431015
Q gi|254780657|r 17 ARNLLSPAYRHMKSISL 33 (61)
Q Consensus 17 arnllspayrhmksisl 33 (61)
-|||||-||.++-+..-
T Consensus 40 ERnLlsvayKn~i~~~R 56 (107)
T 2o02_A 40 ERNLLSVAYKNVVGARR 56 (107)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999987551499
No 6
>>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} (A:1-116)
Probab=13.44 E-value=62 Score=15.04 Aligned_cols=14 Identities=50% Similarity=0.736 Sum_probs=10.1
Q ss_pred HHHHCCHHHHHHHH
Q ss_conf 87522678775431
Q gi|254780657|r 17 ARNLLSPAYRHMKS 30 (61)
Q Consensus 17 arnllspayrhmks 30 (61)
.|||||-||.++-+
T Consensus 47 ERnLLSvaYKn~i~ 60 (116)
T 1o9d_A 47 ERNLLSVAYKNVIG 60 (116)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999988644
No 7
>>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural genomics consortium, SGC; HET: SEP; 1.75A {Homo sapiens} PDB: 2o98_A* (A:1-111)
Probab=13.12 E-value=64 Score=14.96 Aligned_cols=14 Identities=50% Similarity=0.736 Sum_probs=10.1
Q ss_pred HHHHCCHHHHHHHH
Q ss_conf 87522678775431
Q gi|254780657|r 17 ARNLLSPAYRHMKS 30 (61)
Q Consensus 17 arnllspayrhmks 30 (61)
.|||||-||.++-+
T Consensus 42 ERnLLSvayKn~ig 55 (111)
T 2br9_A 42 ERNLLSVAYKNVIG 55 (111)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999887
No 8
>>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} (A:)
Probab=12.67 E-value=48 Score=15.62 Aligned_cols=40 Identities=18% Similarity=0.362 Sum_probs=28.8
Q ss_pred HHHHHHHCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCEEE
Q ss_conf 8888752267877543101554042227551139631388
Q gi|254780657|r 14 KMIARNLLSPAYRHMKSISLADLGAKKIPLEKKKPKSQLF 53 (61)
Q Consensus 14 kmiarnllspayrhmksisladlgakkiplekkkpksqlf 53 (61)
+-+++-++.+.+.|.++|++++-||.-|-.-...-+--+|
T Consensus 107 ~~~~~aI~~~g~~~l~~i~f~~~~aHava~~~~~~~vtfF 146 (188)
T 1ukf_A 107 QTVAHDVAQSGRKHLLSLRFANVQGHAIACSCEGSQFKLF 146 (188)
T ss_dssp HHHHHHHCSTTCEEEEEEEETTTEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCEEEEE
T ss_conf 8899987457987279999238984279998669907998
No 9
>>1dxs_A P53-like transcription factor; P73 SAM-like domain, gene regulation, P53 P63 homologue, sterIle alpha motif, tumour supressor; 2.54A {Homo sapiens} (A:)
Probab=12.62 E-value=68 Score=14.83 Aligned_cols=26 Identities=38% Similarity=0.635 Sum_probs=18.6
Q ss_pred HHHCCHHHHHHHHCCHHHHCCCCCCCCC
Q ss_conf 7522678775431015540422275511
Q gi|254780657|r 18 RNLLSPAYRHMKSISLADLGAKKIPLEK 45 (61)
Q Consensus 18 rnllspayrhmksisladlgakkiplek 45 (61)
+||.| --|...+++.||++-|||-.-
T Consensus 28 qgl~s--i~qL~~~tlEDL~~mkIp~q~ 53 (80)
T 1dxs_A 28 QGLQS--IYHLQNLTIEDLGALKIPEQY 53 (80)
T ss_dssp TTCCC--HHHHHTCCHHHHHHTTCCTTT
T ss_pred CCCHH--HHHHHHCCHHHHHCCCCCHHH
T ss_conf 25205--998851689888717773888
No 10
>>1rg6_A Second splice variant P63; P73 SAM-like domain, gene regulation; NMR {Homo sapiens} (A:)
Probab=11.97 E-value=74 Score=14.62 Aligned_cols=26 Identities=27% Similarity=0.447 Sum_probs=18.9
Q ss_pred HHHHCCHHHHHHHHCCHHHHCCCCCCCC
Q ss_conf 8752267877543101554042227551
Q gi|254780657|r 17 ARNLLSPAYRHMKSISLADLGAKKIPLE 44 (61)
Q Consensus 17 arnllspayrhmksisladlgakkiple 44 (61)
.++|.| --|...+++.||++-|||-.
T Consensus 28 ~qgl~s--i~qL~~~tlEDL~~mkIp~q 53 (75)
T 1rg6_A 28 TQGLTT--IYQIEHYSMDDLASLKIPEQ 53 (75)
T ss_dssp HHTCCS--GGGGSSCCHHHHHTTTCCTH
T ss_pred HCCCHH--HHHHHHCCHHHHHCCCCCHH
T ss_conf 825215--99885168988862777377
Done!