RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780657|ref|YP_003065070.1| hypothetical protein CLIBASIA_02720 [Candidatus Liberibacter asiaticus str. psy62] (61 letters) >d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 155 Score = 23.6 bits (50), Expect = 4.6 Identities = 8/24 (33%), Positives = 12/24 (50%) Query: 7 KNLIRKKKMIARNLLSPAYRHMKS 30 K L K + LL+P Y M++ Sbjct: 132 KALWEKYRQYMAGLLAPPYGVMET 155 >d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Length = 223 Score = 22.9 bits (49), Expect = 8.6 Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 19/59 (32%) Query: 18 RNLLSPAY-----------RHMKSI--------SLADLGAKKIPLEKKKPKSQLFILCN 57 LL+ + + +KS SL + + I K+ + + + Sbjct: 19 ILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQVIEDIKRDFEESILLESE 77 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.320 0.132 0.370 Gapped Lambda K H 0.267 0.0614 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 208,183 Number of extensions: 7167 Number of successful extensions: 17 Number of sequences better than 10.0: 1 Number of HSP's gapped: 17 Number of HSP's successfully gapped: 5 Length of query: 61 Length of database: 2,407,596 Length adjustment: 31 Effective length of query: 30 Effective length of database: 1,981,966 Effective search space: 59458980 Effective search space used: 59458980 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 47 (22.1 bits)