RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780657|ref|YP_003065070.1| hypothetical protein
CLIBASIA_02720 [Candidatus Liberibacter asiaticus str. psy62]
         (61 letters)



>d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1
           and 3 {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 155

 Score = 23.6 bits (50), Expect = 4.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 7   KNLIRKKKMIARNLLSPAYRHMKS 30
           K L  K +     LL+P Y  M++
Sbjct: 132 KALWEKYRQYMAGLLAPPYGVMET 155


>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980
          {Cryptosporidium parvum [TaxId: 5807]}
          Length = 223

 Score = 22.9 bits (49), Expect = 8.6
 Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 19/59 (32%)

Query: 18 RNLLSPAY-----------RHMKSI--------SLADLGAKKIPLEKKKPKSQLFILCN 57
            LL+ +            + +KS         SL +   + I   K+  +  + +   
Sbjct: 19 ILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQVIEDIKRDFEESILLESE 77


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.132    0.370 

Gapped
Lambda     K      H
   0.267   0.0614    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 208,183
Number of extensions: 7167
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 5
Length of query: 61
Length of database: 2,407,596
Length adjustment: 31
Effective length of query: 30
Effective length of database: 1,981,966
Effective search space: 59458980
Effective search space used: 59458980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.1 bits)