HHsearch alignment for GI: 254780658 and conserved domain: PRK10333

>PRK10333 putative ligase; Provisional.
Probab=100.00  E-value=2.6e-41  Score=240.48  Aligned_cols=103  Identities=29%  Similarity=0.501  Sum_probs=92.5

Q ss_pred             CEEEEECCCCCCEECCCCCCCCCCCCC----CCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf             934653488852464888708899986----1146677401422111001112486037899988874499837999832
Q gi|254780658|r    1 MIFRQYENPTDLVKSAVGTLSPPSYAK----EMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAF   76 (113)
Q Consensus         1 l~F~~~~~~~~l~~~~~gI~EP~~~~~----~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~   76 (113)
T Consensus        92 l~f~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~iDlilVP~laFD~~G~RLGyGgGyYDR~L~~~~~~--~~~~Igla~  169 (198)
T PRK10333         92 LLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHY--KTQPVGYAH  169 (198)
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCEEECCCCCHHHHHHHCCCC--CCCEEEEEE
T ss_conf             799980899845528889999998755544644488499440466588816366874251575644203--871899971


Q ss_pred             HHHEECCCCCCCCCCCCCEEECCCCEEEE
Q ss_conf             23242478998447511589989855970
Q gi|254780658|r   77 DMQETSCIQAEATDIRLHAILTESRFSQF  105 (113)
Q Consensus        77 ~~q~~~~ip~e~hD~~ld~iiTe~~~~~f  105 (113)
T Consensus       170 ~~Q~~~~iP~e~hD~~lD~iiTe~~iy~f  198 (198)
T PRK10333        170 DCQLVEKLPVEEWDIPLPAVVTPSKVWEW  198 (198)
T ss_pred             CCEEECCCCCCCCCCCCCEEECCCCEEEC
T ss_conf             22760657997325547999888811519