HHsearch alignment for GI: 254780658 and conserved domain: PRK10333
>PRK10333 putative ligase; Provisional.
Probab=100.00 E-value=2.6e-41 Score=240.48 Aligned_cols=103 Identities=29% Similarity=0.501 Sum_probs=92.5
Q ss_pred CEEEEECCCCCCEECCCCCCCCCCCCC----CCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 934653488852464888708899986----1146677401422111001112486037899988874499837999832
Q gi|254780658|r 1 MIFRQYENPTDLVKSAVGTLSPPSYAK----EMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAF 76 (113)
Q Consensus 1 l~F~~~~~~~~l~~~~~gI~EP~~~~~----~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~ 76 (113)
T Consensus 92 l~f~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~iDlilVP~laFD~~G~RLGyGgGyYDR~L~~~~~~--~~~~Igla~ 169 (198)
T PRK10333 92 LLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHY--KTQPVGYAH 169 (198)
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCEEECCCCCHHHHHHHCCCC--CCCEEEEEE
T ss_conf 799980899845528889999998755544644488499440466588816366874251575644203--871899971
Q ss_pred HHHEECCCCCCCCCCCCCEEECCCCEEEE
Q ss_conf 23242478998447511589989855970
Q gi|254780658|r 77 DMQETSCIQAEATDIRLHAILTESRFSQF 105 (113)
Q Consensus 77 ~~q~~~~ip~e~hD~~ld~iiTe~~~~~f 105 (113)
T Consensus 170 ~~Q~~~~iP~e~hD~~lD~iiTe~~iy~f 198 (198)
T PRK10333 170 DCQLVEKLPVEEWDIPLPAVVTPSKVWEW 198 (198)
T ss_pred CCEEECCCCCCCCCCCCCEEECCCCEEEC
T ss_conf 22760657997325547999888811519