HHsearch alignment of GI: 254780658 and MMDB domain: 1ydm_A_
>1ydm_A (A:) Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.6e-38 Score=223.43 Aligned_cols=102 Identities=27% Similarity=0.499 Sum_probs=93.4
Q ss_pred CEEEEECCCCCCEECCCCCCCCCCCC----CCCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 93465348885246488870889998----61146677401422111001112486037899988874499837999832
Q gi|254780658|r 1 MIFRQYENPTDLVKSAVGTLSPPSYA----KEMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAF 76 (113)
Q Consensus 1 l~F~~~~~~~~l~~~~~gI~EP~~~~----~~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~ 76 (113)
|.|+.|++.++|..++|||+||..+. ....+|++|||+||||.+|+|||||||||||+|++ .++.+||+||
T Consensus 82 ~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~dliiVP~lafd~~G~RLG~G~GyYDr~l~~-----~~~~~vgv~~ 156 (187)
T 1ydm_A 82 XQFRTYQTDDQLETVYAGLLEPVIEKTKEVNPSQIDLXIVPGVCFDVNGFRVGFGGGYYDRYLSE-----YEGKTVSLLL 156 (187)
T ss_dssp CCEEECCCCTTHHHHHTTSCCCC--CCCCCCGGGCCEEECCCSEEETTSCEECCSCCSTTTGGGT-----CCSEEEEECC
T ss_pred EEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCEEECCCCCHHHHHHH-----CCCCEEEEEE
T ss_conf 47897478764133102333345442221234455446611300210171420479727899865-----6897899998
Q ss_pred HHHEECCCCCCCCCCCCCEEECCCCEEEECH
Q ss_conf 2324247899844751158998985597003
Q gi|254780658|r 77 DMQETSCIQAEATDIRLHAILTESRFSQFST 107 (113)
Q Consensus 77 ~~q~~~~ip~e~hD~~ld~iiTe~~~~~f~~ 107 (113)
++|+++++|.|+||++||.||||++++++++
T Consensus 157 ~~q~~~~ip~e~hD~~ld~iiTe~~i~~~~s 187 (187)
T 1ydm_A 157 ECQLFAHVPRLPHDIPVHKLITEDRIISCFS 187 (187)
T ss_dssp GGGEESCCCCCTTCCCCSEEECSSCEEECC-
T ss_pred EEEEECCCCCCCHHCCCCEEEECCCCEECCC
T ss_conf 8377367899605139899996893287479