HHsearch results for GI: 254780658 and protein with PDBid: 1ydm_A
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-39 Score=229.71 Aligned_cols=100 Identities=29% Similarity=0.539 Sum_probs=90.3
Q ss_pred CEEEEECCCCCCEECCCCCCCCCCCC----CCCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 93465348885246488870889998----61146677401422111001112486037899988874499837999832
Q gi|254780658|r 1 MIFRQYENPTDLVKSAVGTLSPPSYA----KEMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAF 76 (113)
Q Consensus 1 l~F~~~~~~~~l~~~~~gI~EP~~~~----~~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~ 76 (113)
|.|+.|++.+.|++|+|||+||..+. ....+|++||||||||++|+|||||||||||+|++++ ..+||+||
T Consensus 82 l~f~~~~~~~~l~~~~~gI~EP~~~~~~~~~~~~iDlilVP~vafD~~G~RlG~GgGyYDR~L~~~~-----~~~igl~~ 156 (187)
T 1ydm_A 82 MQFRTYQTDDQLETVYAGLLEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYE-----GKTVSLLL 156 (187)
T ss_dssp CCEEECCCCTTHHHHHTTSCCCC--CCCCCCGGGCCEEECCCSEEETTSCEECCSCCSTTTGGGTCC-----SEEEEECC
T ss_pred EEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHCC-----CCEEEEEE
T ss_conf 6899727813421176898467754455226333551562157885779462278648888862578-----98899997
Q ss_pred HHHEECCCCCCCCCCCCCEEECCCCEEEE
Q ss_conf 23242478998447511589989855970
Q gi|254780658|r 77 DMQETSCIQAEATDIRLHAILTESRFSQF 105 (113)
Q Consensus 77 ~~q~~~~ip~e~hD~~ld~iiTe~~~~~f 105 (113)
++|+++++|.|+||++||+|+||+++++-
T Consensus 157 ~~Q~~~~ip~e~hD~~ld~iiTe~~ii~C 185 (187)
T 1ydm_A 157 ECQLFAHVPRLPHDIPVHKLITEDRIISC 185 (187)
T ss_dssp GGGEESCCCCCTTCCCCSEEECSSCEEEC
T ss_pred EEEEECCCCCCCCCCCCCEEEECCEEEEE
T ss_conf 64781679997522297999958800881