RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780658|ref|YP_003065071.1| 5-formyltetrahydrofolate cyclo-ligase [Candidatus Liberibacter asiaticus str. psy62] (113 letters) >d1soua_ c.124.1.6 (A:) Hypothetical protein aq_1731 {Aquifex aeolicus [TaxId: 63363]} Length = 194 Score = 71.4 bits (174), Expect = 2e-14 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 1 MIFRQYENPTDLVKSAVGTLSPPSYAKE--MSPDLILMPLIAFDLKGNRIGYGRGYYDRA 58 + + +P L A G + P + D I +P +AFDL+G R+G+G+GYYDR Sbjct: 80 ISLYRVHSPACLGVGAFGIMEPVEGERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRL 139 Query: 59 IADIRLEGKNPYLLGIAFDMQETSCIQAEATDIRLHAILTESRFSQF 105 + +G+A+ Q + +A DI + ++TE + Sbjct: 140 LKR-----VKGLKVGVAYSFQVFERLPRDAWDIPVDVLVTEKNVRRL 181 >d1wkca_ c.124.1.6 (A:) Hypothetical protein TTHA1611 {Thermus thermophilus [TaxId: 274]} Length = 175 Score = 69.5 bits (169), Expect = 7e-14 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 31 PDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQETSCIQAEATD 90 DL+++P +AFD +G R+G+G+G+YDR + ++R +G+ + + D Sbjct: 103 LDLVVVPGLAFDREGYRLGHGQGFYDRFLKEVR-----AATVGVVPQALLFPALPRDPWD 157 Query: 91 IRLHAILTESRFSQF 105 + + + TE+ Sbjct: 158 VPVDHLATEAGVEAV 172 >d1sbqa_ c.124.1.6 (A:) 5,10-methenyltetrahydrofolate synthetase homolog MPN348 {Mycoplasma pneumoniae [TaxId: 2104]} Length = 164 Score = 66.4 bits (161), Expect = 6e-13 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Query: 29 MSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQETSCIQAEA 88 D L+PL+ F+ R+G+G+GYYDR + + + +GIA+ Q+ + + Sbjct: 97 NQIDCFLIPLVGFNKDNYRLGFGKGYYDRYLMQLT---RQQPKIGIAYSFQKGDFLA-DP 152 Query: 89 TDIRLHAILTE 99 D++L I+ + Sbjct: 153 WDVQLDLIIND 163 >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 244 Score = 25.1 bits (54), Expect = 1.7 Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 5/48 (10%) Query: 48 IGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQETSCIQAEATDIRLHA 95 +G G G I K P + GI FD+ + + I Sbjct: 88 VGGGSGRNLELIIS-----KYPLIKGINFDLPQVIENAPPLSGIEHVG 130 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.321 0.138 0.396 Gapped Lambda K H 0.267 0.0681 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 418,389 Number of extensions: 17636 Number of successful extensions: 41 Number of sequences better than 10.0: 1 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 5 Length of query: 113 Length of database: 2,407,596 Length adjustment: 71 Effective length of query: 42 Effective length of database: 1,432,766 Effective search space: 60176172 Effective search space used: 60176172 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 47 (22.0 bits)