HHsearch alignment for GI: 254780659 and conserved domain: TIGR03572

>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=91.01  E-value=1.5  Score=24.50  Aligned_cols=94  Identities=17%  Similarity=0.284  Sum_probs=70.8

Q ss_pred             EEEEEECCC-HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC-CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             699972027-688999999808988860998999917004788678-999999998379989993426530222047542
Q gi|254780659|r    3 LLFLGDIVG-KTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI-TEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         3 iLfiGDIvG-~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi-t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
T Consensus        46 ~lhivDld~a~~~~~~n~~~I~~i~~~~~ipi~v--------GGGIrs~e~~~~ll~~GadkViigs~a~~~p~~~~~~~  117 (232)
T TIGR03572        46 ELIVLDIDASKRGREPLFELISNLAEECFMPLTV--------GGGIRSLEDAKKLLSLGADKVSINTAALENPDLIEEAA  117 (232)
T ss_pred             EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEE--------EECEEEHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHH
T ss_conf             9999968764348821799999999972985899--------71330389999999769968993454521935778999


Q ss_pred             H-C--CCEEEECCCCCCCCCCCEEEEE
Q ss_conf             1-8--9389750079888754079998
Q gi|254780659|r   81 R-H--CKFLRPANYPPNTPGNGSGLYC  104 (274)
Q Consensus        81 ~-~--~~ilRP~N~p~~~PG~G~~i~~  104 (274)
T Consensus       118 ~~~G~q~ivvsiD~k~~~~~~~~~v~~  144 (232)
T TIGR03572       118 RRFGSQCVVVSIDVKKELDGSDYKVYS  144 (232)
T ss_pred             HHCCCCCEEEEEEEECCCCCCCEEEEE
T ss_conf             986994589999984167787279996