HHsearch alignment for GI: 254780659 and conserved domain: TIGR03572
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=91.01 E-value=1.5 Score=24.50 Aligned_cols=94 Identities=17% Similarity=0.284 Sum_probs=70.8
Q ss_pred EEEEEECCC-HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC-CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf 699972027-688999999808988860998999917004788678-999999998379989993426530222047542
Q gi|254780659|r 3 LLFLGDIVG-KTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI-TEKIFCEMMETGIDVITTGNHVWDKREALVFSQ 80 (274)
Q Consensus 3 iLfiGDIvG-~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi-t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 80 (274)
T Consensus 46 ~lhivDld~a~~~~~~n~~~I~~i~~~~~ipi~v--------GGGIrs~e~~~~ll~~GadkViigs~a~~~p~~~~~~~ 117 (232)
T TIGR03572 46 ELIVLDIDASKRGREPLFELISNLAEECFMPLTV--------GGGIRSLEDAKKLLSLGADKVSINTAALENPDLIEEAA 117 (232)
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEE--------EECEEEHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHH
T ss_conf 9999968764348821799999999972985899--------71330389999999769968993454521935778999
Q ss_pred H-C--CCEEEECCCCCCCCCCCEEEEE
Q ss_conf 1-8--9389750079888754079998
Q gi|254780659|r 81 R-H--CKFLRPANYPPNTPGNGSGLYC 104 (274)
Q Consensus 81 ~-~--~~ilRP~N~p~~~PG~G~~i~~ 104 (274)
T Consensus 118 ~~~G~q~ivvsiD~k~~~~~~~~~v~~ 144 (232)
T TIGR03572 118 RRFGSQCVVVSIDVKKELDGSDYKVYS 144 (232)
T ss_pred HHCCCCCEEEEEEEECCCCCCCEEEEE
T ss_conf 986994589999984167787279996