Query gi|254780659|ref|YP_003065072.1| hypothetical protein CLIBASIA_02730 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 274
No_of_seqs 135 out of 850
Neff 4.4
Searched_HMMs 33803
Date Wed Jun 1 14:53:22 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780659.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1t70_A Phosphatase; crystal, 100.0 8.9E-29 2.6E-33 207.0 27.2 250 1-261 1-252 (255)
2 >1t71_A Phosphatase, conserved 100.0 1.4E-28 4E-33 205.8 27.9 268 1-274 5-278 (281)
3 >2z06_A Putative uncharacteriz 100.0 5.3E-27 1.6E-31 195.4 27.8 250 1-262 1-250 (252)
4 >1hp1_A 5'-nucleotidase; metal 99.0 4.8E-08 1.4E-12 72.6 15.4 190 1-191 9-239 (327)
5 >3ive_A Nucleotidase; structur 99.0 1.2E-08 3.6E-13 76.4 12.3 198 1-204 7-256 (307)
6 >2z1a_A 5'-nucleotidase; metal 98.9 3.2E-07 9.5E-12 67.2 16.4 180 1-185 30-244 (327)
7 >3c9f_A 5'-nucleotidase; 2',3' 98.8 6.7E-08 2E-12 71.7 10.8 209 1-213 16-269 (326)
8 >3jyf_A 2',3'-cyclic nucleotid 98.8 5.8E-08 1.7E-12 72.0 9.7 185 1-189 9-252 (339)
9 >3gve_A YFKN protein; alpha-be 98.7 6.5E-07 1.9E-11 65.3 12.5 188 1-189 12-259 (341)
10 >2wdc_A SOXB, sulfur oxidation 98.4 1.5E-05 4.4E-10 56.4 12.2 199 2-207 75-312 (358)
11 >1ii7_A MRE11 nuclease; RAD50, 97.8 0.00028 8.4E-09 48.1 10.4 182 1-186 1-213 (333)
12 >3ib7_A ICC protein; metalloph 97.2 0.013 4E-07 37.3 11.9 226 1-263 4-258 (262)
13 >2q8u_A Exonuclease, putative; 96.9 0.0093 2.7E-07 38.3 9.0 191 1-203 19-249 (281)
14 >1xzw_A Purple acid phosphatas 96.6 0.052 1.5E-06 33.5 10.8 179 1-188 6-210 (305)
15 >1ute_A Protein (II purple aci 96.3 0.094 2.8E-06 31.8 12.5 248 1-263 7-292 (313)
16 >1uf3_A Hypothetical protein T 96.3 0.099 2.9E-06 31.7 11.5 185 1-198 6-203 (228)
17 >2qfp_A Purple acid phosphatas 95.7 0.11 3.3E-06 31.3 9.0 180 1-188 6-210 (310)
18 >3d03_A Phosphohydrolase; glyc 94.5 0.11 3.1E-06 31.5 5.8 72 1-72 1-85 (149)
19 >1s3l_A Hypothetical protein M 91.5 0.62 1.8E-05 26.5 6.1 60 1-69 26-86 (190)
20 >2nxf_A Putative dimetal phosp 91.1 0.33 9.8E-06 28.3 4.4 81 1-81 6-110 (150)
21 >1g5b_A Serine/threonine prote 89.0 0.91 2.7E-05 25.4 5.2 65 1-69 13-77 (221)
22 >1nnw_A Hypothetical protein; 87.1 1.9 5.6E-05 23.4 5.8 65 1-69 2-74 (225)
23 >2yvt_A Hypothetical protein A 84.4 3.2 9.5E-05 21.9 10.1 197 1-215 6-252 (260)
24 >1xm7_A Hypothetical protein A 83.3 2.1 6.1E-05 23.1 4.6 70 1-71 2-84 (195)
25 >2a22_A Vacuolar protein sorti 80.1 0.8 2.4E-05 25.8 1.5 142 1-204 26-170 (215)
26 >2dfj_A Diadenosinetetraphosph 79.7 3.4 0.0001 21.7 4.6 66 1-69 1-67 (280)
27 >1tqx_A D-ribulose-5-phosphate 74.8 3.8 0.00011 21.4 3.8 19 54-72 82-100 (227)
28 >1qv9_A F420-dependent methyle 70.3 8.2 0.00024 19.2 6.0 52 15-69 49-101 (127)
29 >2kkn_A Uncharacterized protei 69.3 0.95 2.8E-05 25.3 -0.4 62 1-70 23-85 (178)
30 >1h1y_A D-ribulose-5-phosphate 68.3 9.1 0.00027 18.9 4.8 17 50-66 23-39 (228)
31 >3ck2_A Conserved uncharacteri 68.0 6.5 0.00019 19.9 3.7 40 1-44 7-46 (176)
32 >1z2w_A Vacuolar protein sorti 67.7 1.7 5.1E-05 23.6 0.7 63 1-71 11-74 (192)
33 >1yad_A Regulatory protein TEN 66.9 5.5 0.00016 20.3 3.1 14 50-63 33-46 (221)
34 >3inp_A D-ribulose-phosphate 3 66.8 4.4 0.00013 21.0 2.6 74 145-222 109-189 (246)
35 >3ceu_A Thiamine phosphate pyr 62.9 4.3 0.00013 21.0 2.0 28 46-73 152-179 (210)
36 >2bdq_A Copper homeostasis pro 62.8 6.7 0.0002 19.8 2.9 53 126-185 75-132 (224)
37 >2f6u_A GGGPS, (S)-3-O-geranyl 61.5 9.2 0.00027 18.9 3.4 97 44-165 18-120 (234)
38 >3g1v_A Orotidine 5'-phosphate 59.4 11 0.00031 18.5 3.5 72 145-218 91-167 (228)
39 >1viz_A PCRB protein homolog; 59.4 6 0.00018 20.1 2.2 28 45-72 19-48 (240)
40 >1fs0_G ATP synthase gamma sub 59.3 3.4 0.0001 21.7 0.9 22 198-219 65-86 (230)
41 >1rpx_A Protein (ribulose-phos 58.6 14 0.0004 17.8 4.6 17 49-65 26-42 (230)
42 >1xi3_A Thiamine phosphate pyr 58.6 7.8 0.00023 19.4 2.7 19 49-67 29-47 (215)
43 >2jbm_A Nicotinate-nucleotide 58.0 13 0.00038 17.9 3.7 21 46-66 89-109 (113)
44 >1qap_A Quinolinic acid phosph 57.6 10 0.0003 18.6 3.1 22 46-67 118-139 (143)
45 >2v82_A 2-dehydro-3-deoxy-6-ph 56.9 6.1 0.00018 20.1 1.9 17 50-66 23-39 (212)
46 >3ldv_A Orotidine 5'-phosphate 56.6 14 0.00043 17.6 3.8 16 50-65 96-111 (255)
47 >2tps_A Protein (thiamin phosp 55.5 7 0.00021 19.7 2.0 35 47-81 32-69 (227)
48 >2fli_A Ribulose-phosphate 3-e 55.0 7.9 0.00024 19.3 2.2 70 145-214 84-156 (220)
49 >3grk_A Enoyl-(acyl-carrier-pr 51.8 9.5 0.00028 18.8 2.2 53 41-93 39-92 (293)
50 >1vhc_A Putative KHG/KDPG aldo 51.2 4 0.00012 21.2 0.2 123 48-179 31-167 (224)
51 >3f4w_A Putative hexulose 6 ph 51.1 18 0.00053 17.0 4.0 60 20-83 42-103 (211)
52 >2nli_A Lactate oxidase; flavo 50.3 13 0.00037 18.0 2.6 14 51-64 102-115 (368)
53 >1ofd_A Ferredoxin-dependent g 49.3 19 0.00056 16.8 4.1 15 51-65 103-117 (441)
54 >2jjy_A Enoyl-[acyl-carrier-pr 49.1 19 0.00056 16.9 3.4 79 41-120 14-94 (268)
55 >2b7n_A Probable nicotinate-nu 47.6 9.1 0.00027 18.9 1.6 22 45-66 120-141 (145)
56 >2czd_A Orotidine 5'-phosphate 47.6 18 0.00053 17.0 3.1 39 150-188 81-120 (208)
57 >1vcf_A Isopentenyl-diphosphat 47.5 16 0.00048 17.3 2.8 46 21-71 172-217 (332)
58 >1i4n_A Indole-3-glycerol phos 47.2 12 0.00035 18.2 2.1 32 48-79 41-72 (230)
59 >1kbi_A Cytochrome B2, L-LCR; 46.8 14 0.00043 17.6 2.5 23 46-68 257-279 (392)
60 >3l0g_A Nicotinate-nucleotide 45.9 10 0.0003 18.7 1.6 21 46-66 117-137 (142)
61 >2hld_G ATP synthase gamma cha 45.2 6.8 0.0002 19.8 0.6 11 198-208 79-89 (278)
62 >1olt_A Oxygen-independent cop 44.9 22 0.00066 16.4 5.4 69 3-72 108-176 (364)
63 >2h6r_A Triosephosphate isomer 44.9 22 0.00066 16.4 3.9 47 21-67 44-90 (219)
64 >3iwp_A Copper homeostasis pro 44.5 9.5 0.00028 18.8 1.3 21 48-68 48-68 (287)
65 >2r8r_A Sensor protein; KDPD, 43.5 18 0.00054 17.0 2.6 42 42-83 14-58 (228)
66 >1wa3_A 2-keto-3-deoxy-6-phosp 42.4 12 0.00035 18.2 1.5 35 49-83 25-62 (205)
67 >3hn7_A UDP-N-acetylmuramate-L 42.3 24 0.00072 16.2 3.8 21 44-64 26-48 (119)
68 >1hg3_A Triosephosphate isomer 42.0 25 0.00073 16.1 4.2 38 32-69 7-49 (225)
69 >1ea0_A Glutamate synthase [NA 41.7 25 0.00074 16.1 4.1 28 149-176 217-244 (412)
70 >2qr6_A IMP dehydrogenase/GMP 41.2 25 0.00075 16.0 4.4 23 46-68 182-204 (356)
71 >1a53_A IGPS, indole-3-glycero 40.6 26 0.00077 16.0 6.6 68 128-202 89-157 (223)
72 >1wbh_A KHG/KDPG aldolase; lya 40.0 7.6 0.00023 19.4 0.2 137 47-190 29-175 (214)
73 >3lab_A Putative KDPG (2-keto- 39.8 8.8 0.00026 19.0 0.5 58 23-85 7-64 (217)
74 >1x1o_A Nicotinate-nucleotide 39.7 24 0.0007 16.2 2.7 21 46-66 118-138 (143)
75 >2p91_A Enoyl-[acyl-carrier-pr 38.5 25 0.00073 16.1 2.6 56 33-90 23-79 (285)
76 >2wq7_A RE11660P; lyase-DNA co 38.2 12 0.00035 18.2 0.9 10 129-138 112-121 (163)
77 >1np7_A DNA photolyase; protei 38.0 13 0.00038 17.9 1.1 50 20-69 90-139 (146)
78 >3lls_A 3-ketoacyl-(acyl-carri 37.8 18 0.00054 17.0 1.9 97 43-139 16-113 (196)
79 >2bib_A CBPE, teichoic acid ph 37.6 29 0.00085 15.7 6.3 72 127-199 55-133 (135)
80 >1qpo_A Quinolinate acid phosp 37.5 16 0.00049 17.3 1.6 19 47-65 121-139 (145)
81 >3exr_A RMPD (hexulose-6-phosp 36.8 14 0.00042 17.7 1.2 86 127-220 69-160 (221)
82 >3ek2_A Enoyl-(acyl-carrier-pr 35.9 28 0.00083 15.8 2.6 43 41-83 22-64 (271)
83 >2r7a_A Bacterial heme binding 35.8 31 0.00091 15.5 5.3 37 25-67 54-90 (91)
84 >3cij_A UPF0100 protein AF_009 35.8 31 0.00091 15.5 4.5 73 13-93 14-91 (127)
85 >1p3d_A UDP-N-acetylmuramate-- 35.4 31 0.00092 15.5 6.3 74 1-96 19-92 (116)
86 >2ck3_G ATP synthase gamma cha 34.5 12 0.00036 18.1 0.5 52 167-219 43-94 (272)
87 >1owl_A Photolyase, deoxyribod 34.4 27 0.00079 15.9 2.2 54 19-72 81-134 (196)
88 >1pii_A N-(5'phosphoribosyl)an 34.3 25 0.00073 16.1 2.1 102 48-185 24-128 (212)
89 >1w0m_A TIM, triosephosphate i 34.3 32 0.00096 15.3 6.3 15 52-66 78-92 (226)
90 >3k31_A Enoyl-(acyl-carrier-pr 34.1 25 0.00073 16.1 2.0 53 41-93 38-91 (296)
91 >3jr2_A Hexulose-6-phosphate s 34.1 7.4 0.00022 19.5 -0.6 85 127-220 70-158 (218)
92 >2o2s_A Enoyl-acyl carrier red 33.9 30 0.00088 15.6 2.4 42 41-82 17-58 (315)
93 >2ew8_A (S)-1-phenylethanol de 33.8 3.9 0.00012 21.3 -2.1 97 43-139 15-112 (249)
94 >1c3p_A Protein (HDLP (histone 32.3 35 0.001 15.1 6.0 137 39-183 135-300 (375)
95 >2r79_A Periplasmic binding pr 32.1 35 0.001 15.1 5.5 36 24-65 53-88 (91)
96 >3c2e_A Nicotinate-nucleotide 31.6 15 0.00045 17.5 0.6 19 48-66 75-93 (148)
97 >1q6o_A Humps, 3-keto-L-gulona 31.5 35 0.001 15.1 2.5 19 200-218 135-153 (216)
98 >3fem_A Pyridoxine biosynthesi 31.0 22 0.00066 16.4 1.4 21 158-179 217-237 (297)
99 >1mxs_A KDPG aldolase; 2-keto- 31.0 11 0.00032 18.5 -0.2 56 21-81 18-73 (225)
100 >2qe7_G ATP synthase subunit g 30.8 12 0.00037 18.0 0.1 27 161-187 154-180 (286)
101 >3gnn_A Nicotinate-nucleotide 30.3 25 0.00073 16.1 1.5 33 49-81 15-47 (165)
102 >1tqj_A Ribulose-phosphate 3-e 30.0 38 0.0011 14.9 5.5 19 49-67 20-38 (230)
103 >1ebf_A Homoserine dehydrogena 29.8 20 0.0006 16.7 1.0 61 23-88 77-142 (166)
104 >2pd4_A Enoyl-[acyl-carrier-pr 29.7 32 0.00094 15.4 2.0 41 41-81 14-54 (275)
105 >3fy4_A 6-4 photolyase; DNA re 29.5 14 0.00042 17.7 0.2 10 129-138 91-100 (142)
106 >3hp4_A GDSL-esterase; psychro 28.7 37 0.0011 15.0 2.2 86 2-87 4-97 (185)
107 >3fz4_A Putative arsenate redu 28.0 27 0.00078 15.9 1.3 76 9-89 7-99 (120)
108 >1af7_A Chemotaxis receptor me 27.8 42 0.0012 14.7 2.6 58 20-88 62-121 (151)
109 >2ekc_A AQ_1548, tryptophan sy 27.2 43 0.0013 14.6 5.3 47 18-67 4-52 (262)
110 >3bpw_A Orotidine 5'-phosphate 27.1 38 0.0011 14.9 2.0 11 55-65 173-183 (342)
111 >3ew8_A HD8, histone deacetyla 26.1 45 0.0013 14.5 5.5 69 113-183 226-309 (388)
112 >1qop_A Tryptophan synthase al 26.1 45 0.0013 14.5 4.8 51 17-68 3-53 (268)
113 >3e7h_A DNA-directed RNA polym 25.9 45 0.0013 14.4 4.3 43 25-67 14-57 (81)
114 >1ulu_A Enoyl-acyl carrier pro 25.8 45 0.0013 14.4 2.6 51 41-91 16-67 (261)
115 >2j4d_A Cryptochrome 3, crypto 25.6 46 0.0013 14.4 2.7 41 21-61 93-133 (150)
116 >3ctl_A D-allulose-6-phosphate 25.2 29 0.00085 15.7 1.1 22 149-170 170-191 (231)
117 >1yzf_A Lipase/acylhydrolase; 25.1 41 0.0012 14.7 1.9 142 1-161 2-157 (195)
118 >1tb3_A Hydroxyacid oxidase 3; 24.8 47 0.0014 14.3 4.5 27 50-76 90-116 (352)
119 >1zgg_A Putative low molecular 24.6 48 0.0014 14.3 6.2 79 1-86 1-81 (150)
120 >1vrd_A Inosine-5'-monophospha 23.3 50 0.0015 14.1 2.9 42 20-69 268-309 (494)
121 >2q8p_A Iron-regulated surface 23.1 50 0.0015 14.1 2.0 31 26-63 56-86 (87)
122 >3cu2_A Ribulose-5-phosphate 3 23.1 51 0.0015 14.1 3.1 71 126-205 78-164 (237)
123 >2yyb_A Hypothetical protein T 22.9 40 0.0012 14.8 1.5 50 17-71 35-91 (111)
124 >2hsj_A Putative platelet acti 22.4 34 0.00099 15.3 1.0 24 129-153 119-142 (143)
125 >3lkb_A Probable branched-chai 22.0 53 0.0016 14.0 4.3 105 6-133 27-156 (172)
126 >1u3d_A Cryptochrome 1 apoprot 21.8 54 0.0016 13.9 2.5 58 18-75 89-147 (259)
127 >2c07_A 3-oxoacyl-(acyl-carrie 21.7 22 0.00066 16.4 -0.0 98 43-140 52-167 (285)
128 >3c3k_A Alanine racemase; stru 21.7 54 0.0016 13.9 6.8 95 124-218 16-112 (154)
129 >1o4u_A Type II quinolic acid 21.7 17 0.0005 17.2 -0.6 43 18-67 20-62 (113)
130 >2nq5_A 5-methyltetrahydropter 21.2 21 0.00062 16.6 -0.2 30 43-72 40-69 (327)
131 >1yv9_A Hydrolase, haloacid de 21.1 55 0.0016 13.8 2.9 55 142-202 37-91 (110)
132 >1p8a_A Protein tyrosine phosp 20.9 56 0.0017 13.8 2.8 61 1-63 5-65 (146)
133 >3epr_A Hydrolase, haloacid de 20.8 56 0.0017 13.8 2.9 55 142-202 37-91 (110)
134 >1vc4_A Indole-3-glycerol phos 20.6 57 0.0017 13.8 2.7 16 49-64 68-83 (254)
135 >3f4l_A Putative oxidoreductas 20.6 55 0.0016 13.9 1.8 15 49-63 79-93 (125)
136 >1j9j_A Stationary phase survi 20.6 57 0.0017 13.8 3.1 45 1-48 1-46 (233)
137 >1eo1_A Hypothetical protein M 20.5 57 0.0017 13.8 5.2 37 21-65 56-92 (124)
138 >1y0e_A Putative N-acetylmanno 20.1 58 0.0017 13.7 5.8 19 49-67 26-44 (207)
139 >1v5x_A PRA isomerase, phospho 20.1 40 0.0012 14.8 1.0 48 127-182 61-108 (203)
140 >1p90_A NAFY protein, hypothet 20.0 59 0.0017 13.7 5.2 37 21-65 58-94 (145)
No 1
>>1t70_A Phosphatase; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.30A {Deinococcus radiodurans R1} (A:)
Probab=99.97 E-value=8.9e-29 Score=206.95 Aligned_cols=250 Identities=40% Similarity=0.699 Sum_probs=233.0
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf 92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ 80 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 80 (274)
|+||+++|+.|+.|...+...+.++|++. |.+++|+|+.-.|.++....++.|.++|.|+.|.|||-||..++..+++
T Consensus 1 l~il~~~Dih~~~g~~~~~~~i~~~~~~~--d~l~v~~GD~~~g~~~~~~~~~~l~~~g~d~~~~GNHe~d~g~l~~~l~ 78 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGAGCLTLGNHAWHHKDIYPMLS 78 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC--SEEEEECTBTTTTSSCCHHHHHHHHHHTCSEEECCTTTTSSTTHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHC--CEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHCHHHHHHHH
T ss_conf 92999960789889999998708878609--8999998667888589999999999757867973605542423689986
Q ss_pred HCCCEEEECCC--CCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
Q ss_conf 18938975007--9888754079998489928999996000058833259899999998634136899889996257622
Q gi|254780659|r 81 RHCKFLRPANY--PPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETT 158 (274)
Q Consensus 81 ~~~~ilRP~N~--p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaT 158 (274)
+.++-...+|. ....+...|.+++ .+|.|++++.+.+..+..+ .+.+.+.+++++++ .++|.+++-+|.-..
T Consensus 79 ~~~~~~l~~n~~~~~~~~~~~~~i~~-~~g~ki~~~g~~~~~~~~~-~~~~~~~~~~~~~~----~~~D~vI~l~H~g~~ 152 (255)
T 1t70_A 79 EDTYPIVRPLNYADPGTPGVGWRTFD-VNGEKLTVVNLLGRVFMEA-VDNPFRTMDALLER----DDLGTVFVDFHAEAT 152 (255)
T ss_dssp TTCSCEECCSCCCCTTCSSCSEEEEE-CSSSEEEEEEEECCTTSCC-CSCHHHHHHHHTTC----SSCCEEEEEEECSCH
T ss_pred HCCCCCCCHHCCCCCCCCCCEEEEEE-ECCCCEEEEEECCEECCCC-CCCHHHHHHHHHHH----CCCCEEEEECCCHHH
T ss_conf 30312363210777789985089995-0656399999705442676-66879999999864----568849999034048
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEE
Q ss_conf 89999997608957799806976246545640367289840560137121035474678988851688654111578719
Q gi|254780659|r 159 SEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPAT 238 (274)
Q Consensus 159 SEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~~r~~~a~g~~~ 238 (274)
.+..++..+++..|.+|+|.|||+++..+.+.+++..|.+..|..|.+.+.++...+....+++..+.. .|........
T Consensus 153 ~~~~~~~~~~~~gvDlilggH~H~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~ 231 (255)
T 1t70_A 153 SEKEAMGWHLAGRVAAVIGTHTHVPTADTRILKGGTAYQTDAGFTGPHDSIIGSAIEGPLQRFLTERPH-RYGVAEGRAE 231 (255)
T ss_dssp HHHHHHHHHHTTSSSEEEEESSCSCBSCCEEETTTEEEESCCCCBEESSSBTTBCSHHHHHHHHHCSCC-CCCBCCSCEE
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCC-CCCCCCCCCE
T ss_conf 778888842348679998568553255326737785898248552053551376738899999718998-8756799879
Q ss_pred EEEEEEEEECCCCCEEEEEEEEE
Q ss_conf 99999998479986746789987
Q gi|254780659|r 239 LCGICAEISDVTGLAEKIAPIRI 261 (274)
Q Consensus 239 l~gv~ieid~~tG~a~~I~ri~i 261 (274)
++++.+++|+. .+..++++|.
T Consensus 232 ~~~~~i~~d~~--~~~~~~~~~~ 252 (255)
T 1t70_A 232 LNGVALHFEGG--KATAAERYRF 252 (255)
T ss_dssp EEEEEEEEETT--EEEEEEEEEE
T ss_pred EEEEEEEECCC--CEEEEEEEEE
T ss_conf 99999997799--7898899994
No 2
>>1t71_A Phosphatase, conserved; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} (A:)
Probab=99.97 E-value=1.4e-28 Score=205.76 Aligned_cols=268 Identities=33% Similarity=0.546 Sum_probs=250.5
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf 92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ 80 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 80 (274)
|||++++|+-|++|...+.+.+.++++++++|+|+.+|++..++...+...++.|...|.|+.|.|||-||..+...+++
T Consensus 5 l~i~h~sD~H~~~~~~~~~~~i~~~~~~~~~dlvv~~GD~~~~~~~~~~~~~~~l~~~~~~~~~~GNHd~~~~~~~~~~~ 84 (281)
T 1t71_A 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYITMGNHTWFQKLDLAVVI 84 (281)
T ss_dssp CEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCEEECCTTTTCCGGGHHHHT
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHCCHHHHHHH
T ss_conf 46999980688889999999819999981999999898667889498999999999717967975714654403177775
Q ss_pred HCCCEEEECCCCC----CCCCCCEEEEECCCCCEEEEEEEEHHHCCCC-CCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 1893897500798----8875407999848992899999600005883-3259899999998634136899889996257
Q gi|254780659|r 81 RHCKFLRPANYPP----NTPGNGSGLYCAKNGSNVLVANIMGRVFMNP-LLDDPFRTADKILATCPLKEQADVIVFDFHA 155 (274)
Q Consensus 81 ~~~~ilRP~N~p~----~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~-~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa 155 (274)
+.+.-.|.+|+.. ..+.+++.+++ .+|.+++++.+....+... ..++|+..+++.+++ ..+|.+++-+|.
T Consensus 85 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~ad~iI~~~H~ 159 (281)
T 1t71_A 85 NKKDLVRPLNLDTSFAFHNLGQGSLVFE-FNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK----RDCDLHIVDFHA 159 (281)
T ss_dssp TCTTEECBSCBCTTSTTTTSSBSEEEEE-CSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT----CCCSEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEE-ECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC----CCCCEEEEEECC
T ss_conf 2654322543544356899987379997-03310256644153224444453777777776403----578879998025
Q ss_pred CCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCH-HHCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 622899999976089577998069762465456403672898405601371-2103547467898885168865411157
Q gi|254780659|r 156 ETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDY-NSSIGLDKEEPINRFITQIPRNRFVIAN 234 (274)
Q Consensus 156 EaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~-~SVIG~~~~~~i~rf~t~~p~~r~~~a~ 234 (274)
-...++..++-+++..|.+|+|-|||++-..++..++|+.|.+..|++|.+ ++++.++.+....+++..++. +|.+..
T Consensus 160 g~~~~~~~~~~~~~~gvdlvl~GH~H~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 238 (281)
T 1t71_A 160 ETTSEKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSRE-HFEVSK 238 (281)
T ss_dssp SCHHHHHHHHHHHTTTSSEEEEESSSSCCTTCEECTTSCEEESCCCEEBCCTTSBTTBCHHHHHHHHTTCCCC-CCCBCC
T ss_pred CHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCC
T ss_conf 2187776776001796899983686742576410368738984575544776743034707899999718998-866789
Q ss_pred CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 8719999999984799867467899876831657875349
Q gi|254780659|r 235 GPATLCGICAEISDVTGLAEKIAPIRIGPRLSETRPDFWT 274 (274)
Q Consensus 235 g~~~l~gv~ieid~~tG~a~~I~ri~igg~L~e~~p~~~~ 274 (274)
....++++.+.++.++.+...++++++-.++...++.+|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (281)
T 1t71_A 239 CGAQLNGVFFEVDVNTKKVIKTEAIRIVEDDPRYLKQDYF 278 (281)
T ss_dssp SCEEEEEEEEECCTTTCCCCEEEEEEEEECCGGGTTCCTT
T ss_pred CCCEEEEEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHH
T ss_conf 9869999999988899974689999971677337888764
No 3
>>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus HB8} (A:)
Probab=99.97 E-value=5.3e-27 Score=195.45 Aligned_cols=250 Identities=43% Similarity=0.733 Sum_probs=235.9
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf 92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ 80 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 80 (274)
||||+++|+-|+.|...+.+.+.+++++. |.+|+|+++...|.+.....++.|.++|.|++|.|||=|+......+.+
T Consensus 1 l~il~~sDiH~~~~~~~~~~~i~~~~~~~--~~li~~~GD~~~~~~~~~~~~~~l~~~~~d~~~~GNHe~~~~~~~~~~~ 78 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY--DLVIANGENAARGKGLDRRSYRLLREAGVDLVSLGNHAWDHKEVYALLE 78 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC--SEEEEECTTTTTTSSCCHHHHHHHHHHTCCEEECCTTTTSCTTHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHC--CEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHC
T ss_conf 94999953689889999998767778528--8899963137888389999999999707978974750124445566640
Q ss_pred HCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
Q ss_conf 18938975007988875407999848992899999600005883325989999999863413689988999625762289
Q gi|254780659|r 81 RHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSE 160 (274)
Q Consensus 81 ~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE 160 (274)
... .++++|+.....+..+.+++. +|.++.++......+..+ .+.+.+.++.++++ .+++.++|-.|.--+.+
T Consensus 79 ~~~-~~~~~nv~~~~~~~~~~~~~~-~g~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~d~iIvl~H~g~~~~ 151 (252)
T 2z06_A 79 SEP-VVRPLNYPPGTPGKGFWRLEV-GGESLLFVQVMGRIFMDP-LDDPFRALDRLLEE----EKADYVLVEVHAEATSE 151 (252)
T ss_dssp HSS-EECCTTSCSSCSSCSEEEEEE-TTEEEEEEEEECCTTSCC-CCCHHHHHHHHHHH----CCCSEEEEEEECSCHHH
T ss_pred CCC-CCCHHHCCCCCCCCCEEEECC-CCCEEEEEEEECCCCCCC-CCCHHHHHHHHHHH----CCCCEEEEECCCCHHHH
T ss_conf 263-235433257887773799904-991689888403136787-78989999999861----67866999835521543
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE
Q ss_conf 99999760895779980697624654564036728984056013712103547467898885168865411157871999
Q gi|254780659|r 161 KQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPATLC 240 (274)
Q Consensus 161 K~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~~r~~~a~g~~~l~ 240 (274)
...+..+++..+.+|+|.|||+++.++++.+++..|++..|+.|.+-+.+.++.+....++.+.+|. ++..++++..+.
T Consensus 152 ~~~~~~~~~~giDlvl~GH~H~~~~~~~~~~~~~~~iv~~g~~g~~~g~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 230 (252)
T 2z06_A 152 KMALAHYLDGRASAVLGTHTHVPTLDATRLPKGTLYQTDVGMTGTYHSIIGGEVETFLARFLTGRPQ-PFRAAQGKARFH 230 (252)
T ss_dssp HHHHHHHHBTTBSEEEEESSCSCBSCCEECTTSCEEESCCCCBEESSSBTTBCHHHHHHHHHHCSCC-CCCBCCSCEEEE
T ss_pred HEEEEEECCCCEEEEEECCCCCCCCCCEEECCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCC-CCCCCCCCCEEE
T ss_conf 3212476079789997167545565446822770898058653266774077758999999718998-763579986999
Q ss_pred EEEEEEECCCCCEEEEEEEEEC
Q ss_conf 9999984799867467899876
Q gi|254780659|r 241 GICAEISDVTGLAEKIAPIRIG 262 (274)
Q Consensus 241 gv~ieid~~tG~a~~I~ri~ig 262 (274)
+++.+++. .++..++++++.
T Consensus 231 ~~~~~~~~--~~~~~~~~~~i~ 250 (252)
T 2z06_A 231 ATELVFEG--GRPVAISPYVWE 250 (252)
T ss_dssp EEEEEEET--TEEEEEEEEEEE
T ss_pred EEEEECCC--CCEEEEEEEEEC
T ss_conf 99999589--978778999727
No 4
>>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} (A:1-327)
Probab=98.99 E-value=4.8e-08 Score=72.60 Aligned_cols=190 Identities=15% Similarity=0.139 Sum_probs=129.1
Q ss_pred CEEEEEEECCCH------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC----CHHHHHHHHH-CCCCEE
Q ss_conf 926999720276------------88999999808988860998999917004788678----9999999983-799899
Q gi|254780659|r 1 MRLLFLGDIVGK------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI----TEKIFCEMME-TGIDVI 63 (274)
Q Consensus 1 MkiLfiGDIvG~------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi----t~~~~~~l~~-~GvDvi 63 (274)
||||..+|+-|. .+...++..+...+ +.++|++++.|-+.-.|... .......+++ ++.|++
T Consensus 9 i~ilht~D~H~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~d~~~~~ggd~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (327)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVA-AEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAM 87 (327)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHH-HHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTCCEE
T ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHCCCCCEE
T ss_conf 99999647544766878777779999999999999986-25999899978988887404255299899999876699899
Q ss_pred EECHHHHCCC--CHHHHHHHCCCEEEECCCCCC---CCCCCEEEEECCCCCEEEEEEEEHHHCC---------CCCCCCH
Q ss_conf 9342653022--204754218938975007988---8754079998489928999996000058---------8332598
Q gi|254780659|r 64 TTGNHVWDKR--EALVFSQRHCKFLRPANYPPN---TPGNGSGLYCAKNGSNVLVANIMGRVFM---------NPLLDDP 129 (274)
Q Consensus 64 T~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~~---~PG~G~~i~~~~~g~ki~Vinl~Gr~fM---------~~~~d~P 129 (274)
+.|||.||.. .+.++++....-.-+.|.... .|......+...+|.+++++.+..-... ......+
T Consensus 88 ~~GNHd~d~g~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~g~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~ 167 (327)
T 1hp1_A 88 AIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKP 167 (327)
T ss_dssp ECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEEECCH
T ss_pred EECHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEECCEECCCCCCCCCCCEEECCCCCCCEEEECCH
T ss_conf 86326133488999999986699889744201565466767526787678422234303553021037663111487689
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCC---------CHHHHHHHHH-HHCCCEEEEEECCCCCCCCHHHHCC
Q ss_conf 999999986341368998899962576---------2289999997-6089577998069762465456403
Q gi|254780659|r 130 FRTADKILATCPLKEQADVIVFDFHAE---------TTSEKQCFAH-FVDSRASLVVGTHTHIPTADAQILD 191 (274)
Q Consensus 130 F~~~d~~l~~~~~~~~~~~i~VDfHaE---------aTSEK~A~g~-~lDGrVsaVvGTHTHV~TaD~rILp 191 (274)
..+....+++.+.....+++++=.|.- .+.+..++.. .++..+..|+|.|+|++...+..-.
T Consensus 168 ~~~~~~~~~~~~~~~~~diviv~~H~g~~~~~~~~~~~~~~~~~~~~~~~~g~d~V~~GH~H~~~~~~~~~~ 239 (327)
T 1hp1_A 168 ADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENK 239 (327)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCCEEETTE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 999999999987524999899934136566632222365117778515678852996488875312344466
No 5
>>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* (A:1-307)
Probab=98.99 E-value=1.2e-08 Score=76.42 Aligned_cols=198 Identities=14% Similarity=0.130 Sum_probs=132.5
Q ss_pred CEEEEEEECCCH----------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC-----CCHHHHHHHHHCC
Q ss_conf 926999720276----------------8899999980898886099899991700478867-----8999999998379
Q gi|254780659|r 1 MRLLFLGDIVGK----------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG-----ITEKIFCEMMETG 59 (274)
Q Consensus 1 MkiLfiGDIvG~----------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G-----it~~~~~~l~~~G 59 (274)
.+||+.||+.|. .|...++..+.+.+.+.. ++.++.+-+.-.|.+ -.+...+-+..+|
T Consensus 7 l~il~t~D~hg~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~-n~l~~~~GD~~~~s~~~~~~~~~~~~~~~n~~~ 85 (307)
T 3ive_A 7 VTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNK-ATWFFDAGDYFTGPYISSLTKGKAIIDIXNTXP 85 (307)
T ss_dssp EEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCS-SEEEEECSCCSSSSHHHHTTTTHHHHHHHTTSC
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CEEEEECCCCCCCCHHHHHHCCHHHHHHHHCCC
T ss_conf 9999981375576365773024787664659999999999985396-989997898877768877649979999987349
Q ss_pred CCEEEECHHHHCC--CCHHHHHHHCCCEEEECCCCC---CCC--CCCEEEEECCCCCEEEEEEEEHHHC----------C
Q ss_conf 9899934265302--220475421893897500798---887--5407999848992899999600005----------8
Q gi|254780659|r 60 IDVITTGNHVWDK--REALVFSQRHCKFLRPANYPP---NTP--GNGSGLYCAKNGSNVLVANIMGRVF----------M 122 (274)
Q Consensus 60 vDviT~GNH~wd~--kei~~~i~~~~~ilRP~N~p~---~~P--G~G~~i~~~~~g~ki~Vinl~Gr~f----------M 122 (274)
.|+.|.|||.||. ..+...++..+.-.=.+|... ..| ..-|.+++ .+|.|++++-+..... .
T Consensus 86 ~d~~~~GNHefd~G~~~l~~~~~~~~~~~l~~N~~~~~~~~~~~~~~~~i~~-~~g~ki~~~g~~~~~~~~~~~~~~~~~ 164 (307)
T 3ive_A 86 FDAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIE-KDGVKIGVIGLHGVFAFNDTVSAATRV 164 (307)
T ss_dssp CSEECCCGGGGTTCHHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEE-ETTEEEEEEEEECHHHHHHHSCGGGCT
T ss_pred CCEEEECHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEE-ECCEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 9999874351465889999999748996895044333464646778769997-688689898752566777511556667
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCC-------------CHHHHHHHHHH-HCCCEEEEEECCCCCCCCHHH
Q ss_conf 8332598999999986341368998899962576-------------22899999976-089577998069762465456
Q gi|254780659|r 123 NPLLDDPFRTADKILATCPLKEQADVIVFDFHAE-------------TTSEKQCFAHF-VDSRASLVVGTHTHIPTADAQ 188 (274)
Q Consensus 123 ~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaE-------------aTSEK~A~g~~-lDGrVsaVvGTHTHV~TaD~r 188 (274)
.....+|...+.+++++. +.++|.++|=.|.- .+.+..+.... ...-+.+|+|.|+|+...-+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~--~~~~d~iIvl~H~G~e~~~~~~~~~~~~~~~~~~~~~~~~~~giDiiiggh~H~~~~~~~ 242 (307)
T 3ive_A 165 GIEARDEIKWLQRYIDEL--KGKVDLTVALIHEGVPARQSSXGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPI 242 (307)
T ss_dssp TEEECCHHHHHHHHHHHH--TTTCSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHCSSCCEEEEESSCCCCSSCE
T ss_pred CEEEECHHHHHHHHHHHH--HCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCE
T ss_conf 557703448899999864--346878999750363444455677531110115677641389987676525554553100
Q ss_pred HCCCCEEEEECCCCCC
Q ss_conf 4036728984056013
Q gi|254780659|r 189 ILDGGTGYITDLGMCG 204 (274)
Q Consensus 189 ILp~GTayiTDvGMtG 204 (274)
. .++|- +.-.|--|
T Consensus 243 ~-~~~~~-~v~ag~~g 256 (307)
T 3ive_A 243 K-VGNTL-ILSTDSGG 256 (307)
T ss_dssp E-ETTEE-EECCCSTT
T ss_pred E-ECCCE-EECCCCCC
T ss_conf 1-02210-10168885
No 6
>>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus HB8} (A:1-327)
Probab=98.89 E-value=3.2e-07 Score=67.22 Aligned_cols=180 Identities=16% Similarity=0.092 Sum_probs=128.0
Q ss_pred CEEEEEEECCCH---------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC-----CCHHHHHHHHHCCC
Q ss_conf 926999720276---------------8899999980898886099899991700478867-----89999999983799
Q gi|254780659|r 1 MRLLFLGDIVGK---------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG-----ITEKIFCEMMETGI 60 (274)
Q Consensus 1 MkiLfiGDIvG~---------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G-----it~~~~~~l~~~Gv 60 (274)
.+||+.||+-|. .|-..++..+.+.+.+..--+++-+|.+ -.|.+ -.+..++-+..+|.
T Consensus 30 i~il~~~D~hg~~~~~~~~~~~~~~~~~~~a~~~~~i~~~~~~~~n~~~~~aGD~-~~gs~~~~~~~~~~~~~~l~~~g~ 108 (327)
T 2z1a_A 30 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDV-FQGTLYFNQYRGLADRYFMHRLRY 108 (327)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCC-SSSSHHHHHHTTHHHHHHHHHTTC
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC-CCCCHHHHHHCCCHHHHHHHCCCC
T ss_conf 9999973465486464544457777647599999999999966979199977988-876699886198069999860697
Q ss_pred CEEEECHHHHCC--CCHHHHHHHCCCEEEECCCCCCC---C---CCCEEEEECCCCCEEEEEEEEHHHC-------CCCC
Q ss_conf 899934265302--22047542189389750079888---7---5407999848992899999600005-------8833
Q gi|254780659|r 61 DVITTGNHVWDK--REALVFSQRHCKFLRPANYPPNT---P---GNGSGLYCAKNGSNVLVANIMGRVF-------MNPL 125 (274)
Q Consensus 61 DviT~GNH~wd~--kei~~~i~~~~~ilRP~N~p~~~---P---G~G~~i~~~~~g~ki~Vinl~Gr~f-------M~~~ 125 (274)
|++|.|||.||. ..+...++..+.-.=.+|.-... | -.-|.+.+ .+|.||+++.+.-... =+..
T Consensus 109 d~~~~GNHefD~G~~~l~~~~~~~~~~~l~aNi~~~~~~~~~~~~~~~~i~e-~~G~kI~~iG~t~~~~~~~~~~~~~~~ 187 (327)
T 2z1a_A 109 RAMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVV-VGGERVGIIGLTTPDTREISNPGPTVA 187 (327)
T ss_dssp CEEECCGGGGTTCHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEE-ETTEEEEEEEEECTTHHHHSCCCTTCE
T ss_pred CEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEE-CCCEEEEEECCCCCCCCCCCCCCCEEE
T ss_conf 5897453001279799999997568976886013235553466645238860-487488784333676333346675058
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
Q ss_conf 259899999998634136899889996257622899999976089577998069762465
Q gi|254780659|r 126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTA 185 (274)
Q Consensus 126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~Ta 185 (274)
..+|..++.+.+++.+ .+.+|+|+|=.|.-... -..++.... .+.+++|-|.|+.-.
T Consensus 188 ~~~~~~~~~~~i~~~~-~~~~D~vIvl~H~G~~~-~~~~~~~~~-~~d~~~~gh~h~~~~ 244 (327)
T 2z1a_A 188 FLDPYESAQKAVYELL-AKGVNKIVVLSHLGYGE-DLKLARRLV-GVQVIVGGHSHTLLG 244 (327)
T ss_dssp ECCHHHHHHHHHHHHH-HTTCCCEEEEEESCHHH-HHHHHTTCS-SCCEEEECSSCCCBS
T ss_pred ECCHHHHHHHHHHHHH-CCCCCEEEEEECCCCHH-HHHHHHHCC-CCCCCCCCCCCEEEC
T ss_conf 6547899999999976-16667799960468278-999998487-865223675332312
No 7
>>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein structure initiative, PSI-2; 1.90A {Candida albicans SC5314} (A:1-326)
Probab=98.81 E-value=6.7e-08 Score=71.66 Aligned_cols=209 Identities=14% Similarity=0.080 Sum_probs=127.6
Q ss_pred CEEEEEEECCCH--------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC-------CCHHHHHHHHHCC
Q ss_conf 926999720276--------------8899999980898886099899991700478867-------8999999998379
Q gi|254780659|r 1 MRLLFLGDIVGK--------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG-------ITEKIFCEMMETG 59 (274)
Q Consensus 1 MkiLfiGDIvG~--------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G-------it~~~~~~l~~~G 59 (274)
++||++||+-|. .|...+...+.+.+++...++....+-+.-+|.+ -.+..++-|..+|
T Consensus 16 l~il~~~D~hg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~n~l~~~~GD~~~~s~~~~~~~~~~~~~~~~l~~~g 95 (326)
T 3c9f_A 16 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQD 95 (326)
T ss_dssp EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSC
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHCCC
T ss_conf 89998355677887656655556663579999999999998559988999788777886233313658889999987679
Q ss_pred CCEEEECHHHHCCCC-----HHHHHHHCCCEE-------EECCCCCCCCCCCEEEEECC-CCCEEEEEEEEHHHC----C
Q ss_conf 989993426530222-----047542189389-------75007988875407999848-992899999600005----8
Q gi|254780659|r 60 IDVITTGNHVWDKRE-----ALVFSQRHCKFL-------RPANYPPNTPGNGSGLYCAK-NGSNVLVANIMGRVF----M 122 (274)
Q Consensus 60 vDviT~GNH~wd~ke-----i~~~i~~~~~il-------RP~N~p~~~PG~G~~i~~~~-~g~ki~Vinl~Gr~f----M 122 (274)
.|++|.|||.||.-. ....+++.+.-. ...+-|...+-..+.+...+ ++.+++...+....- .
T Consensus 96 ~D~~~~GNHefD~G~~~l~~~~~~l~~~~~~~l~aNi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 175 (326)
T 3c9f_A 96 YDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSG 175 (326)
T ss_dssp CSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTT
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCC
T ss_conf 89997245467777327899999876438975630467427876556555642489974499799987621047767887
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCC------CHHHHHHHH-HHHCCCEEEEEECCCCCCCCHHHHCCCCEE
Q ss_conf 8332598999999986341368998899962576------228999999-760895779980697624654564036728
Q gi|254780659|r 123 NPLLDDPFRTADKILATCPLKEQADVIVFDFHAE------TTSEKQCFA-HFVDSRASLVVGTHTHIPTADAQILDGGTG 195 (274)
Q Consensus 123 ~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaE------aTSEK~A~g-~~lDGrVsaVvGTHTHV~TaD~rILp~GTa 195 (274)
......+........... .++++|+|+|=.|.- ..++...++ ...+.-+.+|+|.|+|++...+.. +||
T Consensus 176 ~~~~~~~~~~~~~~~~~~-~~~~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~~~g~d~iiggH~H~~~~~~~~--~~~- 251 (326)
T 3c9f_A 176 TRVTPMAETIHEPWFQEA-LKHEVDLIIIVGHTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRDFTVFD--SLS- 251 (326)
T ss_dssp EEECCHHHHTTSHHHHHH-TTSCCSEEEEECSSCCCTTTCHHHHHHHHHHHHCTTSEEEEEECSSCCEEEEEEE--TTE-
T ss_pred CEECCHHHHHHHHHHHHH-HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC--CCE-
T ss_conf 387378999978999999-8579998999968686767521567999999758998869956876665665445--882-
Q ss_pred EEECCCCCCCHHHCCCCC
Q ss_conf 984056013712103547
Q gi|254780659|r 196 YITDLGMCGDYNSSIGLD 213 (274)
Q Consensus 196 yiTDvGMtG~~~SVIG~~ 213 (274)
+++..|.-|.+=+.+-..
T Consensus 252 ~iv~~~~~g~~i~~~~l~ 269 (326)
T 3c9f_A 252 TGLQSGRYCETVGWTSVN 269 (326)
T ss_dssp EEEEECSTTSEEEEEEEC
T ss_pred EEEEECCCCCCCCEEEEE
T ss_conf 467605102202469999
No 8
>>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} (A:)
Probab=98.78 E-value=5.8e-08 Score=72.04 Aligned_cols=185 Identities=12% Similarity=0.017 Sum_probs=125.2
Q ss_pred CEEEEEEECCCH--------------HHHHHHHHHHHHHHHHCCCCEEEECCEE-CCCCCC-------------CCHHHH
Q ss_conf 926999720276--------------8899999980898886099899991700-478867-------------899999
Q gi|254780659|r 1 MRLLFLGDIVGK--------------TGRSIVYEMLPRLIRDFQLDFVIANGEN-SAGGFG-------------ITEKIF 52 (274)
Q Consensus 1 MkiLfiGDIvG~--------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgEN-aa~G~G-------------it~~~~ 52 (274)
.+|+++||+.|+ -|-..+...+.+++++. |.++.|-|- ...|-. -....+
T Consensus 9 i~i~~~~Dih~~~~~~~~~~~~~~~~gg~~~~~~~v~~~~~~~--d~~l~~~~Gd~~~g~~~~~~~~~~~~~~~~~~~~~ 86 (339)
T 3jyf_A 9 LRIXETTDLHSNXXDFDYYKDAATEKFGLVRTASLIEQARAEV--KNSVLVDNGDVIQGSPLGDYXAAKGLKEGDVHPVY 86 (339)
T ss_dssp EEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTC--SCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHHH
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHH
T ss_conf 9999970244587674666777767674999999999999778--89599986878887250876535311233158999
Q ss_pred HHHHHCCCCEEEECHHHHCCC--CHHHHHHHCCCEEEECCCCCCCCC-------------CCEEEEECCCCCEEEEEEEE
Q ss_conf 999837998999342653022--204754218938975007988875-------------40799984899289999960
Q gi|254780659|r 53 CEMMETGIDVITTGNHVWDKR--EALVFSQRHCKFLRPANYPPNTPG-------------NGSGLYCAKNGSNVLVANIM 117 (274)
Q Consensus 53 ~~l~~~GvDviT~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~~~PG-------------~G~~i~~~~~g~ki~Vinl~ 117 (274)
.-+-.+|.|+.|.|||.||.- .+...++..+.-.=.+|.-..... ..+.++ ..+|.|++++.+.
T Consensus 87 ~~~n~~~~d~~~~gNHefD~G~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~g~~i~~~g~~ 165 (339)
T 3jyf_A 87 KAXNTLNYAVGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKTGKPXFTPYLIQDTRVVDSDG-QIHTLRIGYIGFV 165 (339)
T ss_dssp HHHTTSCCSEEECCGGGGTTCHHHHHHHHHTCSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTS-CEEEEEEEEEEEC
T ss_pred HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEECCC
T ss_conf 999871983796015200203899999765323326775203366787477870899998885266-5365699986467
Q ss_pred HHHC---------CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC------CCHHHHHHHHHH-HCCCEEEEEECCCC
Q ss_conf 0005---------8833259899999998634136899889996257------622899999976-08957799806976
Q gi|254780659|r 118 GRVF---------MNPLLDDPFRTADKILATCPLKEQADVIVFDFHA------ETTSEKQCFAHF-VDSRASLVVGTHTH 181 (274)
Q Consensus 118 Gr~f---------M~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa------EaTSEK~A~g~~-lDGrVsaVvGTHTH 181 (274)
.... =.-...+|...+.+.+++.+ .+.+|+++|=.|. +.+++..+++.. .+.-+.+|+|.|+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~d~vivl~H~G~~~~~~~~~~~~~~a~~~~~~giD~IiggH~H 244 (339)
T 3jyf_A 166 PPQIXTWDKANLNGKVTVNDITETARKYIPEXR-AKGADVVVVVAHSGLSADPYQAXAENSVYYLSQVPGVDAIXFGHAH 244 (339)
T ss_dssp CTTHHHHTHHHHTTTEEECCHHHHHHHHHHHHH-HTTCSEEEEEECCCCCCSCCCTTCSCCHHHHTTSTTCCEEEECSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCC
T ss_conf 765432435555677443889999999998777-5178753200135856663322332157887258998789979988
Q ss_pred CCCCHHHH
Q ss_conf 24654564
Q gi|254780659|r 182 IPTADAQI 189 (274)
Q Consensus 182 V~TaD~rI 189 (274)
+...-+..
T Consensus 245 ~~~~~e~~ 252 (339)
T 3jyf_A 245 AVFPGKDF 252 (339)
T ss_dssp SEESSGGG
T ss_pred CEECCCCC
T ss_conf 60147754
No 9
>>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} (A:)
Probab=98.68 E-value=6.5e-07 Score=65.25 Aligned_cols=188 Identities=15% Similarity=0.084 Sum_probs=124.7
Q ss_pred CEEEEEEECCCH--------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC---------------C-CHH
Q ss_conf 926999720276--------------8899999980898886099899991700478867---------------8-999
Q gi|254780659|r 1 MRLLFLGDIVGK--------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG---------------I-TEK 50 (274)
Q Consensus 1 MkiLfiGDIvG~--------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G---------------i-t~~ 50 (274)
++||+.||+.|. .|-..+...+.+++++...-+++-+|....+..= . .+.
T Consensus 12 i~il~t~D~h~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~GD~~~~s~~~~~~~~~~~~~~~~~~~~~~ 91 (341)
T 3gve_A 12 LSILATTDIHANXXDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKTHP 91 (341)
T ss_dssp EEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSCCH
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCHH
T ss_conf 99999756656866756667887776669999999999996589979997786577870144432203443333457628
Q ss_pred HHHHHHHCCCCEEEECHHHHCCC--CHHHHHHHCCCEEEECCCCC---CCCCCCEEEE--------ECCCCCEEEEEEEE
Q ss_conf 99999837998999342653022--20475421893897500798---8875407999--------84899289999960
Q gi|254780659|r 51 IFCEMMETGIDVITTGNHVWDKR--EALVFSQRHCKFLRPANYPP---NTPGNGSGLY--------CAKNGSNVLVANIM 117 (274)
Q Consensus 51 ~~~~l~~~GvDviT~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~---~~PG~G~~i~--------~~~~g~ki~Vinl~ 117 (274)
...-+-.+|.|+.|.|||.+|.. .+.+.++..+.-.=.+|... ..+..-+.+. ..++|.+++++.+.
T Consensus 92 ~~~~~n~~~~d~~~~GNHefD~g~~~l~~~~~~~~~~~i~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~g~~ 171 (341)
T 3gve_A 92 IISVXNALKYDAGTLGNHEFNYGLDFLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVKVGYIGFV 171 (341)
T ss_dssp HHHHHHHTTCCBEECCGGGGTTCHHHHHHHHHTCSSCEECSSEECTTSCBSSCCEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred HHHHHHHCCCEEEECCCHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCC
T ss_conf 99999865860796452111478899999983378977987632367865578752341589984585203899871565
Q ss_pred HHHC---------CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCH------HHHHHHHHHH--CCCEEEEEECCC
Q ss_conf 0005---------8833259899999998634136899889996257622------8999999760--895779980697
Q gi|254780659|r 118 GRVF---------MNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETT------SEKQCFAHFV--DSRASLVVGTHT 180 (274)
Q Consensus 118 Gr~f---------M~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaT------SEK~A~g~~l--DGrVsaVvGTHT 180 (274)
.... -......|...+.+.+++.+ ..++|++++=.|.-.. .+..+++..+ +.-+.+|+|.|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~D~iI~l~H~G~~~~~~~~~~~~~~~~~a~~~~g~D~IiggH~ 250 (341)
T 3gve_A 172 PPQIXTWDKKNLEGQVQVQDIVESANETIPKXK-AEGADVIIALAHTGIEKQAQSSGAENAVFDLATKTKGIDAIISGHQ 250 (341)
T ss_dssp CTTHHHHTHHHHTTTCEECCHHHHHHHHHHHHH-HTTCSEEEEEECCCCCSSCCCTTCSSCHHHHHHHCSCCCEEEECSS
T ss_pred CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCC
T ss_conf 764332346567587188629999999988776-3698379997213755443345534078999855998359963777
Q ss_pred CCCCCHHHH
Q ss_conf 624654564
Q gi|254780659|r 181 HIPTADAQI 189 (274)
Q Consensus 181 HV~TaD~rI 189 (274)
|++-..+..
T Consensus 251 H~~~~~~~~ 259 (341)
T 3gve_A 251 HGLFPSAEY 259 (341)
T ss_dssp CCEESCGGG
T ss_pred CCCCCCCCC
T ss_conf 754567643
No 10
>>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A (A:1-358)
Probab=98.35 E-value=1.5e-05 Score=56.44 Aligned_cols=199 Identities=13% Similarity=0.052 Sum_probs=131.7
Q ss_pred EEEEEEECCCH----------------HHHHHHHHHHHHHHHHC---CCCEEEECCEECCCCCCCC-----HHHHHHHHH
Q ss_conf 26999720276----------------88999999808988860---9989999170047886789-----999999983
Q gi|254780659|r 2 RLLFLGDIVGK----------------TGRSIVYEMLPRLIRDF---QLDFVIANGENSAGGFGIT-----EKIFCEMME 57 (274)
Q Consensus 2 kiLfiGDIvG~----------------~Gr~~v~~~Lp~l~~~~---~~DfvIaNgENaa~G~Git-----~~~~~~l~~ 57 (274)
+|++.||+-|. .|-..+...+.++|++. .+++.++.+...-.|.++. +..++-|-.
T Consensus 75 ~i~~~~D~hg~~~~~~~~~~~~~~~~~gg~~~~~~~i~~~r~~~d~~~~n~l~~~~GD~~~gs~~~~~~~g~~~~~~l~~ 154 (358)
T 2wdc_A 75 GVERGTPLAYLLSYVDFVELARTFGPIGGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNL 154 (358)
T ss_dssp TCCTTSHHHHHHCSTTHHHHHHHHCCBCCHHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHH
T ss_conf 88999733322444426778875578688999999999999998714999799967977777288877488689999973
Q ss_pred CCCCEEEECHHHHCCC--CHHHHHHHCCCEEEECCCCCC---CCC-CCEEEEECCCCCEEEEEEEEHHHC---CC-----
Q ss_conf 7998999342653022--204754218938975007988---875-407999848992899999600005---88-----
Q gi|254780659|r 58 TGIDVITTGNHVWDKR--EALVFSQRHCKFLRPANYPPN---TPG-NGSGLYCAKNGSNVLVANIMGRVF---MN----- 123 (274)
Q Consensus 58 ~GvDviT~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~~---~PG-~G~~i~~~~~g~ki~Vinl~Gr~f---M~----- 123 (274)
+|+|++| |||.||.- .+...++..+.-.=-+|.... .|. .-|.+++ .+|.||+++.+..... ..
T Consensus 155 ~g~d~~a-~NHefD~G~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~-~~g~kvg~ig~~~~~~~~~~~~~~~~ 232 (358)
T 2wdc_A 155 VGVDHMV-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHR-VGPYALAVVGASYPYVKVSHPESFTE 232 (358)
T ss_dssp HTCCEEC-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEE-ETTEEEEEEEECCTTHHHHSCGGGGT
T ss_pred CCCCEEE-CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEE-ECCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 6976886-462134677889999975689855400010345773778789999-79878988513677631025655424
Q ss_pred -CCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf -3325989999999863413689988999625762289999997608957799806976246545640367289840560
Q gi|254780659|r 124 -PLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM 202 (274)
Q Consensus 124 -~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM 202 (274)
....+|...+.+.+++.+ ...+|+|+|=.|.-..-++.- +-.. -.+.+|+|-|+|+....+..- ++| +++-.|.
T Consensus 233 ~~~~~~~~~~~~~~~~~lk-~~~~D~VIvl~H~G~~~~~~~-a~~~-~~vD~IiggH~H~~~~~~~~~-~~~-~v~~~gs 307 (358)
T 2wdc_A 233 GLSFALDERRLQEAVDKAR-AEGANAVVLLSHNGMQLDAAL-AERI-RGIDLILSGHTHDLTPRPWRV-GKT-WIVAGSA 307 (358)
T ss_dssp TEECCCCHHHHHHHHHHHH-HTTCSEEEEEECSCHHHHHHH-HTTS-SSCCEEEECSSCCCCSSCEEE-TTE-EEEECCS
T ss_pred CEEECCHHHHHHHHHHHHH-HCCCCEEEEECCCCCCCCHHH-HHHC-CCCEEEEECCCCCCCCCCCEE-CCE-EEEECCC
T ss_conf 4386689999999999988-659999999546785422677-7513-673099946667644467144-225-8984576
Q ss_pred CCCHH
Q ss_conf 13712
Q gi|254780659|r 203 CGDYN 207 (274)
Q Consensus 203 tG~~~ 207 (274)
-|-+=
T Consensus 308 ~G~~i 312 (358)
T 2wdc_A 308 AGKAL 312 (358)
T ss_dssp TTCEE
T ss_pred CCCEE
T ss_conf 54148
No 11
>>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} (A:)
Probab=97.84 E-value=0.00028 Score=48.13 Aligned_cols=182 Identities=12% Similarity=-0.005 Sum_probs=105.6
Q ss_pred CEEEEEEECCCH-------HHHHHHH---HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHH------HHHHHC-CCCEE
Q ss_conf 926999720276-------8899999---980898886099899991700478867899999------999837-99899
Q gi|254780659|r 1 MRLLFLGDIVGK-------TGRSIVY---EMLPRLIRDFQLDFVIANGENSAGGFGITEKIF------CEMMET-GIDVI 63 (274)
Q Consensus 1 MkiLfiGDIvG~-------~Gr~~v~---~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~------~~l~~~-GvDvi 63 (274)
||||+++|+=.. .+..... +.+-...++.++|||+..|.-.-++..-..... .++.++ .-.++
T Consensus 1 lril~~sD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 98999924768987766136689999999999999997499999989887889979989999999877766513985798
Q ss_pred EECHHHHCC--CCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCH----HHHHHHHH
Q ss_conf 934265302--220475421893897500798887540799984899289999960000588332598----99999998
Q gi|254780659|r 64 TTGNHVWDK--REALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDP----FRTADKIL 137 (274)
Q Consensus 64 T~GNH~wd~--kei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~P----F~~~d~~l 137 (274)
+.|||=++. .....+...........++.....+.++.+... +.............-.....-. .......+
T Consensus 81 v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (333)
T 1ii7_A 81 IEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLTSERL--GNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEIL 158 (333)
T ss_dssp ECCTTTCCSSSCCHHHHHHHTTSCEECEEESSCCCSSSEEEEEC--TTSCEEEEEEETTEEEEEECCCCHHHHHSSTTHH
T ss_pred ECCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEECCCCC--CCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf 26754665664136778986597076134321122203203444--6420230356676379656451266788999987
Q ss_pred HHCCCCCCCCEEEEECCCCCHHHHHHHH--------HHHCCCEEEEEECCCCCCCCH
Q ss_conf 6341368998899962576228999999--------760895779980697624654
Q gi|254780659|r 138 ATCPLKEQADVIVFDFHAETTSEKQCFA--------HFVDSRASLVVGTHTHIPTAD 186 (274)
Q Consensus 138 ~~~~~~~~~~~i~VDfHaEaTSEK~A~g--------~~lDGrVsaVvGTHTHV~TaD 186 (274)
.. .......+++-+|....+...... ....-.|.+|+.=|||.+...
T Consensus 159 ~~--~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~ 213 (333)
T 1ii7_A 159 KR--LFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLPEGYLYYALGHIHKRYET 213 (333)
T ss_dssp HH--HCCCCSSEEEEEECCBHHHHHTTTCCCCSBCGGGSCTTCSEEEEESCSSCEEE
T ss_pred HH--HCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEEC
T ss_conf 65--20567765877311335666777755542013452137878986865662160
No 12
>>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, hydrolase; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A (A:23-284)
Probab=97.19 E-value=0.013 Score=37.29 Aligned_cols=226 Identities=11% Similarity=0.009 Sum_probs=131.3
Q ss_pred CEEEEEEECC-C---------HHHHHHHHHHHHHHHHH-CCCCEEEECCEECCCCCCCCHH-----HHHHHHHCCCCE-E
Q ss_conf 9269997202-7---------68899999980898886-0998999917004788678999-----999998379989-9
Q gi|254780659|r 1 MRLLFLGDIV-G---------KTGRSIVYEMLPRLIRD-FQLDFVIANGENSAGGFGITEK-----IFCEMMETGIDV-I 63 (274)
Q Consensus 1 MkiLfiGDIv-G---------~~Gr~~v~~~Lp~l~~~-~~~DfvIaNgENaa~G~Git~~-----~~~~l~~~GvDv-i 63 (274)
||||+++|+= | ..-++.+++.+..++++ .++||||..|-...++.--... ..+.+...++-+ .
T Consensus 4 ~ril~isD~H~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 83 (262)
T 3ib7_A 4 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVW 83 (262)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 79999777870898763136749999999999999844999989998977888999999999999865555325985899
Q ss_pred EECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 93426530222047542189389750079888754079998489928999996000058833259899999998634136
Q gi|254780659|r 64 TTGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLK 143 (274)
Q Consensus 64 T~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~ 143 (274)
+.|||=+........-. .....+.-+..+.. .. ...+.+-................+.+.......
T Consensus 84 v~GNHD~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (262)
T 3ib7_A 84 VMGNHDDRAELRKFLLD-----------EAPSMAPLDRVCMI-DG--LRIIVLDTSVPGHHHGEIRASQLGWLAEELATP 149 (262)
T ss_dssp CCCTTSCHHHHHHHHHC-----------CCCCCSCCCEEEEE-TT--EEEEECCCCCTTCCSBCCCHHHHHHHHHHTTSC
T ss_pred ECCCCCCHHHHHHHCCC-----------CCCCCCCCCEEEEE-CC--CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 79865545555431013-----------46656775125870-78--412322444568867732488889999998741
Q ss_pred CCCCEEEEECCCCCH------------HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCC
Q ss_conf 899889996257622------------89999997608957799806976246545640367289840560137121035
Q gi|254780659|r 144 EQADVIVFDFHAETT------------SEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIG 211 (274)
Q Consensus 144 ~~~~~i~VDfHaEaT------------SEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG 211 (274)
.....+++-.|.-.. -++..........|.+++.-|+|-.. ++-++|+.|++.-+.+..+..-
T Consensus 150 ~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~~---~~~~~~~~~~~~g~~~~~~~~~-- 224 (262)
T 3ib7_A 150 APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYST---NATFVGIPVSVASATCYTQDLT-- 224 (262)
T ss_dssp CTTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCE---EEEETTEEEEECCCSSCEECTT--
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCC---EEEECCEEEEEECCCCCCCCCC--
T ss_conf 15663799704875567631133333446889998743696599974348148---1799999999808770145256--
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECC
Q ss_conf 4746789888516886541115787199999999847998674678998768
Q gi|254780659|r 212 LDKEEPINRFITQIPRNRFVIANGPATLCGICAEISDVTGLAEKIAPIRIGP 263 (274)
Q Consensus 212 ~~~~~~i~rf~t~~p~~r~~~a~g~~~l~gv~ieid~~tG~a~~I~ri~igg 263 (274)
+. ..........-+-.++++++.. .+++.+++.+
T Consensus 225 --------------~~-~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~ 258 (262)
T 3ib7_A 225 --------------VA-AGGTRGRDGAQGCNLVHVYPDT---VVHSVIPLGG 258 (262)
T ss_dssp --------------SC-TTCCCEESCSCEEEEEEECSSC---EEEEEEECSC
T ss_pred --------------CC-CCCCCCCCCCCCEEEEEEECCC---EEEEEEECCC
T ss_conf --------------78-8876675689976999996997---7999986489
No 13
>>2q8u_A Exonuclease, putative; TM1635, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.20A {Thermotoga maritima MSB8} (A:1-281)
Probab=96.92 E-value=0.0093 Score=38.32 Aligned_cols=191 Identities=12% Similarity=0.061 Sum_probs=100.5
Q ss_pred CEEEEEEECC----------CHHHHHHH---HHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHH------CCCC
Q ss_conf 9269997202----------76889999---998089888609989999170047886789999999983------7998
Q gi|254780659|r 1 MRLLFLGDIV----------GKTGRSIV---YEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMME------TGID 61 (274)
Q Consensus 1 MkiLfiGDIv----------G~~Gr~~v---~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~------~GvD 61 (274)
|||++++|+= +..+.... .+.+-+..++.++|||+..|....++.--.....+.+.. .++.
T Consensus 19 ~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (281)
T 2q8u_A 19 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRXXRTAP 98 (281)
T ss_dssp EEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 68899824758985867544156899999999999999997199899989877889998889999988999998415887
Q ss_pred E-EEECHHHHCCC--CHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCC-------CCHHH
Q ss_conf 9-99342653022--20475421893897500798887540799984899289999960000588332-------59899
Q gi|254780659|r 62 V-ITTGNHVWDKR--EALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLL-------DDPFR 131 (274)
Q Consensus 62 v-iT~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~-------d~PF~ 131 (274)
+ ++.|||-+... ....+......-.. ...+.....+. .+...+.+.+...-....... .....
T Consensus 99 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (281)
T 2q8u_A 99 VVVLPGNHDWKGLKLFGNFVTSISSDITF------VXSFEPVDVEA-KRGQKVRILPFPYPDESEALRKNEGDFRFFLES 171 (281)
T ss_dssp EEECCC------CHHHHHHHHHHCSSEEE------CCSSSCEEEEC-TTSCEEEEEEECCC-------CCSSHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCEE------CCCCCCEEEEE-CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 89955887631134321100012455100------24557568861-048659999614676222223430577899999
Q ss_pred HHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH-----------HHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECC
Q ss_conf 9999986341368998899962576228999999-----------76089577998069762465456403672898405
Q gi|254780659|r 132 TADKILATCPLKEQADVIVFDFHAETTSEKQCFA-----------HFVDSRASLVVGTHTHIPTADAQILDGGTGYITDL 200 (274)
Q Consensus 132 ~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g-----------~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDv 200 (274)
.....+... ......+++-.|--..+-..... ......|.+|+.=|+|...- ...+|+.|++-.
T Consensus 172 ~~~~~~~~~--~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vl~GH~H~~~~---~~~~~~~~~~~~ 246 (281)
T 2q8u_A 172 RLNKLYEEA--LKKEDFAIFXGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFRE---IQKQPLTIYPGS 246 (281)
T ss_dssp HHHHHHHHH--HTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEE---EEETTEEEECCC
T ss_pred HHHHHHHHH--CCCCCCEEEEEECEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCE---ECCCCCEEECCC
T ss_conf 999999863--565675389730122266677853247654553777523662565066666633---068988586489
Q ss_pred CCC
Q ss_conf 601
Q gi|254780659|r 201 GMC 203 (274)
Q Consensus 201 GMt 203 (274)
.++
T Consensus 247 ~~~ 249 (281)
T 2q8u_A 247 LIR 249 (281)
T ss_dssp SSC
T ss_pred CCC
T ss_conf 616
No 14
>>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} (A:122-426)
Probab=96.58 E-value=0.052 Score=33.47 Aligned_cols=179 Identities=12% Similarity=-0.020 Sum_probs=102.0
Q ss_pred CEEEEEEEC-CCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCC--H----HHHHHHH--HCCCCE-EEECHHHH
Q ss_conf 926999720-276889999998089888609989999170047886789--9----9999998--379989-99342653
Q gi|254780659|r 1 MRLLFLGDI-VGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGIT--E----KIFCEMM--ETGIDV-ITTGNHVW 70 (274)
Q Consensus 1 MkiLfiGDI-vG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git--~----~~~~~l~--~~GvDv-iT~GNH~w 70 (274)
|||++|+|+ .|... -...+..+.++.++||||..|...-++..-. . ...+.|. ..++-+ ++.|||=+
T Consensus 6 ~ki~~isD~H~~~~~---~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~~iP~~~i~GNHD~ 82 (305)
T 1xzw_A 6 YVFGLIGDIGQTHDS---NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEI 82 (305)
T ss_dssp EEEEEECSCTTBHHH---HHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGC
T ss_pred EEEEEECCCCCCCHH---HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCC
T ss_conf 589986135646504---68999998637786389633324456886431103456788877677613855984376433
Q ss_pred CCCCHHHH---HHH-CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 02220475---421-89389750079888754079998489928999996000058833259899999998634136899
Q gi|254780659|r 71 DKREALVF---SQR-HCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQA 146 (274)
Q Consensus 71 d~kei~~~---i~~-~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~ 146 (274)
....-... ... .....-+.+. ....+..+..... +. ...+.+........ .+.-..-+++.+...+ ....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~-~~~q~~~l~~~l~~~~-~~~~ 156 (305)
T 1xzw_A 83 DYAPDIGEYQPFVPFTNRYPTPHEA-SGSGDPLWYAIKR--AS-AHIIVLSSYSGFVK-YSPQYKWFTSELEKVN-RSET 156 (305)
T ss_dssp CCBGGGTBCSTTHHHHHHSCCCCGG-GTCSSTTSEEEEE--TT-EEEEECCTTSCCST-TSHHHHHHHHHHHHCC-TTTC
T ss_pred CCCCCCCCCCCCCCHHHCCCCCCCC-CCCCCCCEEEEEE--CC-EEEEEEECCCCCCC-CCHHHHHHHHHHHHHH-CCCC
T ss_conf 4566655444465566709653345-6788886699982--64-89999742457654-3288999999998744-2489
Q ss_pred CEEEEECCCCC-----------HHH-HHHHHHHHCCCEEEEEECCCCCCCCHHH
Q ss_conf 88999625762-----------289-9999976089577998069762465456
Q gi|254780659|r 147 DVIVFDFHAET-----------TSE-KQCFAHFVDSRASLVVGTHTHIPTADAQ 188 (274)
Q Consensus 147 ~~i~VDfHaEa-----------TSE-K~A~g~~lDGrVsaVvGTHTHV~TaD~r 188 (274)
..+++-.|.-. ... ..-......-++..++--|+|.......
T Consensus 157 ~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~H~~~~~~~ 210 (305)
T 1xzw_A 157 PWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSER 210 (305)
T ss_dssp CEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECS
T ss_pred CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEC
T ss_conf 869999378864467677667778999999999970976999788466476420
No 15
>>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase, metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} (A:)
Probab=96.33 E-value=0.094 Score=31.79 Aligned_cols=248 Identities=14% Similarity=0.059 Sum_probs=120.7
Q ss_pred CEEEEEEECCCH-------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCH--HHHHHHH--------HCCCC-E
Q ss_conf 926999720276-------8899999980898886099899991700478867899--9999998--------37998-9
Q gi|254780659|r 1 MRLLFLGDIVGK-------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITE--KIFCEMM--------ETGID-V 62 (274)
Q Consensus 1 MkiLfiGDIvG~-------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~--~~~~~l~--------~~GvD-v 62 (274)
|||++++|+=.. .......+.+-+..++.++|||+..|-+..++.--.. ..+.+.+ .+++. .
T Consensus 7 ~~i~~~sD~H~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~vi~~GDi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (313)
T 1ute_A 7 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWH 86 (313)
T ss_dssp EEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEE
T ss_pred EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 89999965899987544307799999999999750799799989988775788864068999999998611001476469
Q ss_pred EEECHHHHCCCC--HHHHHHHCCCEEEECCCC-----CCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCC---CCCHHHH
Q ss_conf 993426530222--047542189389750079-----888754079998489928999996000058833---2598999
Q gi|254780659|r 63 ITTGNHVWDKRE--ALVFSQRHCKFLRPANYP-----PNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPL---LDDPFRT 132 (274)
Q Consensus 63 iT~GNH~wd~ke--i~~~i~~~~~ilRP~N~p-----~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~---~d~PF~~ 132 (274)
.+.|||-+.... ...............++. ....+..+..+.. ++..+.+++..-.....+. ...+-..
T Consensus 87 ~~~gnhd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~q 165 (313)
T 1ute_A 87 VLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFML-DTVTLCGNSDDFVSQQPERPRNLALARTQ 165 (313)
T ss_dssp ECCCHHHHHSCHHHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEEC-CHHHHHCCGGGSTTCSCCSCSCHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEEE-CCEEEEECCCCCCCCCCCCCCCCCHHHHH
T ss_conf 87405510366412103000264554899874036436788961699982-43667713576433222465451049999
Q ss_pred HHHHHHHCCCCCCCCEEEEECCC----------CCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf 99998634136899889996257----------62289999997608957799806976246545640367289840560
Q gi|254780659|r 133 ADKILATCPLKEQADVIVFDFHA----------ETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM 202 (274)
Q Consensus 133 ~d~~l~~~~~~~~~~~i~VDfHa----------EaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM 202 (274)
.+++.+.+. ....+.++|=.|. .....+......-.-+|.+++.=|+|.... ....+|.-|++.-..
T Consensus 166 ~~wl~~~l~-~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~l~~~~v~~~l~GH~H~~~~--~~~~~~~~~~~~g~~ 242 (313)
T 1ute_A 166 LAWIKKQLA-AAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQY--LQDENGLGFVLSGAG 242 (313)
T ss_dssp HHHHHHHHH-HCCCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEE--EECTTCCEEEEECBS
T ss_pred HHHHHHHHH-CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEE--EECCCCCEEEEECCC
T ss_conf 999999996-08567779982566544555556588888689999874962999667742468--725998669997988
Q ss_pred CCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECC
Q ss_conf 1371210354746789888516886541115787199999999847998674678998768
Q gi|254780659|r 203 CGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPATLCGICAEISDVTGLAEKIAPIRIGP 263 (274)
Q Consensus 203 tG~~~SVIG~~~~~~i~rf~t~~p~~r~~~a~g~~~l~gv~ieid~~tG~a~~I~ri~igg 263 (274)
+.+.-+. . ......+.+. ++........-.-.++++++.. ..++.+...+
T Consensus 243 ~~~~~~~----~---~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~~~~---~~~~~~~~~~ 292 (313)
T 1ute_A 243 NFMDPSK----K---HLRKVPNGYL-RFHFGAENSLGGFAYVEITPKE---MSVTYIEASG 292 (313)
T ss_dssp SCCCCCC----T---TGGGSCTTCE-EEEECCTTSCCEEEEEEECSSC---EEEEEEETTS
T ss_pred CCCCCCC----C---CCCCCCCCCC-EEEECCCCCCCEEEEEEEECCE---EEEEEECCCC
T ss_conf 7778875----5---5666885433-1445157887649999998999---9999990999
No 16
>>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} (A:)
Probab=96.30 E-value=0.099 Score=31.67 Aligned_cols=185 Identities=10% Similarity=-0.064 Sum_probs=93.4
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCC--HHHHHHHHHCCCCEEE-ECHHHHCCCCH-H
Q ss_conf 926999720276889999998089888609989999170047886789--9999999837998999-34265302220-4
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGIT--EKIFCEMMETGIDVIT-TGNHVWDKREA-L 76 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git--~~~~~~l~~~GvDviT-~GNH~wd~kei-~ 76 (274)
|||+++||+=|.. +.+.+.+..++ +.++|+||..|.-.-.|.... ....+.|.+.++.++. .|||=+....- .
T Consensus 6 ~~i~~isD~H~~~--~~~~~~~~~~~-~~~~d~vi~~GDl~d~~~~~~~~~~~~~~l~~~~~pv~~i~GNHD~~~~~~~~ 82 (228)
T 1uf3_A 6 RYILATSNPXGDL--EALEKFVKLAP-DTGADAIALIGNLXPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLR 82 (228)
T ss_dssp CEEEEEECCTTCH--HHHHHHHTHHH-HHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHHH
T ss_pred CEEEEEECCCCCH--HHHHHHHHHHH-HHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHH
T ss_conf 5899995687899--99999999877-70999999899889887652588875300001151699996788873211001
Q ss_pred H---HHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 7---5421893897500798887540799984899289999960000588332598999999986341368998899962
Q gi|254780659|r 77 V---FSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDF 153 (274)
Q Consensus 77 ~---~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDf 153 (274)
. .............+.. ....++.++.. ++......+.. .....+........+............+++--
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (228)
T 1uf3_A 83 EAANVELVHPEXRNVHETFT-FWRGPYLVAGV-GGEIADEGEPE----EHEALRYPAWVAEYRLKALWELKDYPKIFLFH 156 (228)
T ss_dssp HHHHHHHHCTTEEECBTSEE-EETTTEEEEEE-CSEEESSSCCB----SSSSCEEEHHHHHHHHGGGGGSCSCCEEEEES
T ss_pred CCCCCCCCCCCCCCCCEEEE-EECCCCEEECC-CCCCCCCCCCC----HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 01344333453211220456-50477047412-22345677652----12211125788999999976401667348996
Q ss_pred CCC------CHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEE
Q ss_conf 576------228999999760895779980697624654564036728984
Q gi|254780659|r 154 HAE------TTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYIT 198 (274)
Q Consensus 154 HaE------aTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiT 198 (274)
|.. ...........-.-.+..|+-=|||.+.- ..+++-|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~GH~H~~~~----~~~~~~~~~ 203 (228)
T 1uf3_A 157 TXPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKGQKHE----XLGASWVVV 203 (228)
T ss_dssp SCBCBTTTBTTSBHHHHHHHHHHCCSEEEECCSSCEEE----EETTEEEEE
T ss_pred EECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCEE----EECCEEEEE
T ss_conf 41047532232579898764225986899867666615----709849997
No 17
>>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} (A:115-424)
Probab=95.73 E-value=0.11 Score=31.29 Aligned_cols=180 Identities=11% Similarity=0.008 Sum_probs=97.3
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCC--HHHH----HHH--HHCCCCE-EEECHHHHC
Q ss_conf 926999720276889999998089888609989999170047886789--9999----999--8379989-993426530
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGIT--EKIF----CEM--METGIDV-ITTGNHVWD 71 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git--~~~~----~~l--~~~GvDv-iT~GNH~wd 71 (274)
|||++++|+=-. ...-.+.+-...++.++||||..|...-++..-. .... +.| +..++-+ ++.|||=+.
T Consensus 6 ~~i~~isD~H~~--~~~~~~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~v~GNHD~~ 83 (310)
T 2qfp_A 6 YTFGLIGDLGQS--FDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIE 83 (310)
T ss_dssp EEEEEECSCTTB--HHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHC
T ss_pred CEEEEECCCCCC--CCHHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 158997443457--640567888975556887799932150158885421056788998888887138769936765213
Q ss_pred CCCHHHHHHH----CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 2220475421----893897500798887540799984899289999960000588332598999999986341368998
Q gi|254780659|r 72 KREALVFSQR----HCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQAD 147 (274)
Q Consensus 72 ~kei~~~i~~----~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~ 147 (274)
.......... .....-+.+.. ......+..+.. .. .....+....... ..+.-..-+++.|+..+ .....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~--~~~~~~~~~~~~~-~~~~q~~wl~~~l~~~~-~~~~~ 157 (310)
T 2qfp_A 84 FAPEINETEPFKPFSYRYHVPYEAS-QSTSPFWYSIKR-AS--AHIIVLSSYSAYG-RGTPQYTWLKKELRKVK-RSETP 157 (310)
T ss_dssp CBGGGTBCSTTHHHHHHCCCCGGGG-TCSSTTSEEEEE-TT--EEEEECCTTSCCS-TTSHHHHHHHHHHHHCC-TTTCC
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCC-CCCCCCEEEEEE-CC--EEEEEECCCCCCC-CCHHHHHHHHHHHHHHH-CCCCC
T ss_conf 5766554335542233234545677-888762288744-88--8899834755777-75299999999998755-13688
Q ss_pred EEEEECCCCCHH------------HHHHHHHHHCCCEEEEEECCCCCCCCHHH
Q ss_conf 899962576228------------99999976089577998069762465456
Q gi|254780659|r 148 VIVFDFHAETTS------------EKQCFAHFVDSRASLVVGTHTHIPTADAQ 188 (274)
Q Consensus 148 ~i~VDfHaEaTS------------EK~A~g~~lDGrVsaVvGTHTHV~TaD~r 188 (274)
.+++-.|.--.+ -+.-......-++..++-=|.|....-..
T Consensus 158 ~~i~~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hgH~~~~~~~ 210 (310)
T 2qfp_A 158 WLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSER 210 (310)
T ss_dssp EEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECS
T ss_pred EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECC
T ss_conf 69995176641147778765467899999999975955999825631575103
No 18
>>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} (A:1-98,A:224-274)
Probab=94.47 E-value=0.11 Score=31.45 Aligned_cols=72 Identities=15% Similarity=0.044 Sum_probs=53.7
Q ss_pred CEEEEEEECC----------CHHHHHHHHHHHHHHHHH-CCCCEEEECCEECCCCCCCCHHHH-HHHHHCCCC-EEEECH
Q ss_conf 9269997202----------768899999980898886-099899991700478867899999-999837998-999342
Q gi|254780659|r 1 MRLLFLGDIV----------GKTGRSIVYEMLPRLIRD-FQLDFVIANGENSAGGFGITEKIF-CEMMETGID-VITTGN 67 (274)
Q Consensus 1 MkiLfiGDIv----------G~~Gr~~v~~~Lp~l~~~-~~~DfvIaNgENaa~G~Git~~~~-~~l~~~GvD-viT~GN 67 (274)
|||+++.|+= +.-.+..+++.+..+.+. .++||||..|.=.-++.--.-+.+ +.|.++++. .++.||
T Consensus 1 mkil~iSDlHlg~~~~~~~~~~~~~~~l~~ii~~i~a~~~~~D~Vvi~GDl~d~~~~~~~~~~~~~L~~l~ipv~~V~GN 80 (149)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (149)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 98999905667988632026768999999999999835899999998832570884058999999975148878999067
Q ss_pred HHHCC
Q ss_conf 65302
Q gi|254780659|r 68 HVWDK 72 (274)
Q Consensus 68 H~wd~ 72 (274)
|=+..
T Consensus 81 HD~~~ 85 (149)
T 3d03_A 81 HDDKA 85 (149)
T ss_dssp TSCHH
T ss_pred CCHHH
T ss_conf 42167
No 19
>>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} (A:)
Probab=91.46 E-value=0.62 Score=26.48 Aligned_cols=60 Identities=17% Similarity=0.221 Sum_probs=47.2
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCE-EEECHHH
Q ss_conf 92699972027688999999808988860998999917004788678999999998379989-9934265
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDV-ITTGNHV 69 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDv-iT~GNH~ 69 (274)
|||++||||-|. +.++++.|..++ +.++|.+|..|.- +.+..++.|.+.+..+ ...|||=
T Consensus 26 mri~visDiHG~--~~~l~~~l~~i~-~~~~D~ii~~GD~------vd~g~~~~l~~l~~~~~~V~GNhD 86 (190)
T 1s3l_A 26 MKIGIMSDTHDH--LPNIRKAIEIFN-DENVETVIHCGDF------VSLFVIKEFENLNANIIATYGNND 86 (190)
T ss_dssp CEEEEECCCTTC--HHHHHHHHHHHH-HSCCSEEEECSCC------CSTHHHHHGGGCSSEEEEECCTTC
T ss_pred CEEEEEECCCCC--HHHHHHHHHHHH-HCCCCEEEECCCC------CCHHHHHHHHHCCCCEEEEECCCC
T ss_conf 589999808999--699999999997-5599999987883------898999998734760899727654
No 20
>>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} (A:1-117,A:290-322)
Probab=91.12 E-value=0.33 Score=28.27 Aligned_cols=81 Identities=14% Similarity=0.117 Sum_probs=51.8
Q ss_pred CEEEEEEEC-CCHH------------HH---HHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCH-------HHHHHHHH
Q ss_conf 926999720-2768------------89---9999980898886099899991700478867899-------99999983
Q gi|254780659|r 1 MRLLFLGDI-VGKT------------GR---SIVYEMLPRLIRDFQLDFVIANGENSAGGFGITE-------KIFCEMME 57 (274)
Q Consensus 1 MkiLfiGDI-vG~~------------Gr---~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~-------~~~~~l~~ 57 (274)
|||+.+.|+ +|.+ .+ ....+.+-...+++++||||..|....+...... ...+.+.+
T Consensus 6 ~kil~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~pD~Vi~~GDl~d~~~~~~~~~~~~~~~~~~~~~~ 85 (150)
T 2nxf_A 6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVXAELDA 85 (150)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHT
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 79999835888877765344543203578889999999999742799999999987889875236899999999999987
Q ss_pred CCCCEE-EECHHHHCCCCHHHHHHH
Q ss_conf 799899-934265302220475421
Q gi|254780659|r 58 TGIDVI-TTGNHVWDKREALVFSQR 81 (274)
Q Consensus 58 ~GvDvi-T~GNH~wd~kei~~~i~~ 81 (274)
+++.++ ..|||=+-......+...
T Consensus 86 ~~i~v~~I~GNHD~~~~~~~~~~~~ 110 (150)
T 2nxf_A 86 CSVDVHHVWGNHEFYNFSRPSLLSS 110 (150)
T ss_dssp TCSEEEECCCHHHHHHCCHHHHHTS
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHH
T ss_conf 5998899862485333304554220
No 21
>>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} (A:)
Probab=89.00 E-value=0.91 Score=25.40 Aligned_cols=65 Identities=20% Similarity=0.203 Sum_probs=54.4
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHH
Q ss_conf 926999720276889999998089888609989999170047886789999999983799899934265
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHV 69 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~ 69 (274)
|++.+||||=|.- .++++.|.++......|.+|..|.-. ++|....-+-+++...-...-.|||=
T Consensus 13 ~~i~vIgDIHG~~--~~L~~lL~~~~~~~~~d~li~lGD~v--DrGp~s~ev~~~l~~~~~~~i~GNHe 77 (221)
T 1g5b_A 13 RNIWVVGDLHGCY--TNLMNKLDTIGFDNKKDLLISVGDLV--DRGAENVECLELITFPWFRAVRGNHE 77 (221)
T ss_dssp SCEEEECCCTTCH--HHHHHHHHHHTCCTTTCEEEECSCCS--SSSSCHHHHHGGGGSTTEEECCCHHH
T ss_pred CEEEEEEECCCCH--HHHHHHHHHCCCCCCCCEEEEECCCC--CCCCCCCHHHHHCCCCCEEEEECCCH
T ss_conf 7599998501599--99999998569998878899917865--89844030244302321378624625
No 22
>>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} (A:1-225)
Probab=87.11 E-value=1.9 Score=23.37 Aligned_cols=65 Identities=14% Similarity=0.056 Sum_probs=47.1
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHC----CCCEEEECCEECCCCCCCCHHHH-HH---HHHCCCCEEEECHHH
Q ss_conf 92699972027688999999808988860----99899991700478867899999-99---983799899934265
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDF----QLDFVIANGENSAGGFGITEKIF-CE---MMETGIDVITTGNHV 69 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~----~~DfvIaNgENaa~G~Git~~~~-~~---l~~~GvDviT~GNH~ 69 (274)
|||.+||||=|.. .++++.|.++..+. ..|.+|..|.=.. +|.-..-. +. |..-+--..-.|||-
T Consensus 2 Mri~vIgDIHG~~--~~L~~ll~~i~~~~~~~~~~d~li~lGDlvd--rG~~s~evi~~l~~l~~~~~~~~i~GNHe 74 (225)
T 1nnw_A 2 VYVAVLANIAGNL--PALTAALSRIEEMREEGYEIEKYYILGNIVG--LFPYPKEVIEVIKDLTKKENVKIIRGKYD 74 (225)
T ss_dssp CEEEEEECCTTCH--HHHHHHHHHHHHHHHTTCCEEEEEEESCSSS--SSSCHHHHHHHHHHHHHHSCEEEECCHHH
T ss_pred CEEEEEECCCCCH--HHHHHHHHHHHHHHCCCCCCCEEEEECCCCC--CCCCHHHHHHHHHHHHHCCCEEEECCCCH
T ss_conf 7899998320299--9999999999875315888778999377378--98887999999997653078189806710
No 23
>>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} (A:)
Probab=84.40 E-value=3.2 Score=21.87 Aligned_cols=197 Identities=13% Similarity=0.034 Sum_probs=96.2
Q ss_pred CEEEEEEECCC-HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCC----------------------------HHH
Q ss_conf 92699972027-6889999998089888609989999170047886789----------------------------999
Q gi|254780659|r 1 MRLLFLGDIVG-KTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGIT----------------------------EKI 51 (274)
Q Consensus 1 MkiLfiGDIvG-~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git----------------------------~~~ 51 (274)
|||+.++|+=+ ....+.+. +..++.++|+|+..|.-...+.--. .+.
T Consensus 6 mri~~iSDlH~~~~~~~~~~----~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (260)
T 2yvt_A 6 RKVLAIKNFKERFDLLPKLK----GVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKF 81 (260)
T ss_dssp CEEEEEECCTTCGGGHHHHH----HHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHH----HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 07999972899989999999----98766499999995666899878989999999876551023311011136778999
Q ss_pred HHHHHHCCCCE-EEECHHHHCCCC-HHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHH----HC-CCC
Q ss_conf 99998379989-993426530222-047542189389750079888754079998489928999996000----05-883
Q gi|254780659|r 52 FCEMMETGIDV-ITTGNHVWDKRE-ALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGR----VF-MNP 124 (274)
Q Consensus 52 ~~~l~~~GvDv-iT~GNH~wd~ke-i~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr----~f-M~~ 124 (274)
.+++..+++.+ ...|||-+.-.. ....+.... ...+..+ ...+.... .+. ..++..... .. ...
T Consensus 82 ~~~~~~~~~~~~~~~GNhd~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 152 (260)
T 2yvt_A 82 FREIGELGVKTFVVPGKNDAPLKIFLRAAYEAET-AYPNIRV-----LHEGFAGW-RGE--FEVIGFGGLLTEHEFEEDF 152 (260)
T ss_dssp HHHHHTTCSEEEEECCTTSCCHHHHHHHHHHTTT-TCTTEEE-----CSSEEEEE-TTT--EEEEEECSEEESSCCBSSS
T ss_pred HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHC-CCCCCCC-----CCCEEEEE-CCC--EEEEEECCCCCCCCCCCHH
T ss_conf 9888753985899947883255566777642311-3453201-----24336995-398--8999946767765444033
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH--------------HHHHHHHHHCCCEEEEEECCCCCCCCHHHHC
Q ss_conf 32598999999986341368998899962576228--------------9999997608957799806976246545640
Q gi|254780659|r 125 LLDDPFRTADKILATCPLKEQADVIVFDFHAETTS--------------EKQCFAHFVDSRASLVVGTHTHIPTADAQIL 190 (274)
Q Consensus 125 ~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTS--------------EK~A~g~~lDGrVsaVvGTHTHV~TaD~rIL 190 (274)
.....-...+++.+... .......+|=+|.--.+ .+.........+|.+++==|||.+.. .
T Consensus 153 ~~~~~~~~~~~l~~~l~-~~~~~~~iv~~hh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~i~GH~H~~~~----~ 227 (260)
T 2yvt_A 153 VLKYPRWYVEYILKFVN-ELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHE----L 227 (260)
T ss_dssp SCEEEHHHHHHHGGGGG-GSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEE----E
T ss_pred HHHHHHHHHHHHHHHHH-HCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCEE----E
T ss_conf 33345678999876431-014565389985023566544444322011205788876402981999960307778----7
Q ss_pred CCCEEEEECCCCCCCHHHCCCCCHH
Q ss_conf 3672898405601371210354746
Q gi|254780659|r 191 DGGTGYITDLGMCGDYNSSIGLDKE 215 (274)
Q Consensus 191 p~GTayiTDvGMtG~~~SVIG~~~~ 215 (274)
.+++-|+.---..+..-+.++.+++
T Consensus 228 ~~~~~~v~~Gs~~~~~~~~~~~~~~ 252 (260)
T 2yvt_A 228 VGNTIVVNPGEFEEGRYAFLDLTQH 252 (260)
T ss_dssp ETTEEEEECCBGGGTEEEEEETTTT
T ss_pred ECCEEEEECCCCCCCEEEEEEECCC
T ss_conf 1998999836053585999998199
No 24
>>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initiative, midwest center for structural genomics, PSI, MCSG; 2.40A {Aquifex aeolicus VF5} (A:)
Probab=83.27 E-value=2.1 Score=23.12 Aligned_cols=70 Identities=14% Similarity=-0.001 Sum_probs=48.1
Q ss_pred CEEEEEEECCCH-HHHH----------HHHHHHHHHHHH-CCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCE-EEECH
Q ss_conf 926999720276-8899----------999980898886-0998999917004788678999999998379989-99342
Q gi|254780659|r 1 MRLLFLGDIVGK-TGRS----------IVYEMLPRLIRD-FQLDFVIANGENSAGGFGITEKIFCEMMETGIDV-ITTGN 67 (274)
Q Consensus 1 MkiLfiGDIvG~-~Gr~----------~v~~~Lp~l~~~-~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDv-iT~GN 67 (274)
|||++++|+=+. ..-. ..+..+..+... ..+|+||.-|.=.-.|. -.....+.|.+.++.+ +..||
T Consensus 2 Mri~~iSD~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~-~~~~~~~~l~~~~~p~~~v~GN 80 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFN-DKNEYLRIWKALPGRKILVMGN 80 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSC-CTTSHHHHHHHSSSEEEEECCT
T ss_pred CEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-CHHHHHHHHHHCCCCEEEEEEC
T ss_conf 659999677789710433278899999999999999851788988999188413467-6899999999759986999626
Q ss_pred HHHC
Q ss_conf 6530
Q gi|254780659|r 68 HVWD 71 (274)
Q Consensus 68 H~wd 71 (274)
|-+.
T Consensus 81 HD~~ 84 (195)
T 1xm7_A 81 HDKD 84 (195)
T ss_dssp TCCC
T ss_pred CCCH
T ss_conf 9962
No 25
>>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} (A:)
Probab=80.06 E-value=0.8 Score=25.78 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=79.3
Q ss_pred CEEEEEEECCCHHHH-HHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCC-EEEECHHHHCCCCHHHH
Q ss_conf 926999720276889-9999980898886099899991700478867899999999837998-99934265302220475
Q gi|254780659|r 1 MRLLFLGDIVGKTGR-SIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGID-VITTGNHVWDKREALVF 78 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr-~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvD-viT~GNH~wd~kei~~~ 78 (274)
|||++|+||=|..-. ..++ .+-+..++.++|.||..|.- ......+.|.+.+.- ..-.|||-..
T Consensus 26 mrI~~iSDiHg~~~~~~~~~-~~~~~~~~~~~D~iv~~GDl------~~~~~~~~l~~l~~~~~~V~GNhd~~------- 91 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPS-NFRELLATDKINYVLCTGNV------CSQEYVEMLKNITKNVYIVSGDLDSA------- 91 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCG-GGHHHHHCTTCCEEEECSCC------CCHHHHHHHHHHCSCEEECCCTTCCS-------
T ss_pred CEEEEEECCCCCCCCCHHHH-HHHHHHCCCCCCEEEECCCC------CCHHHHHHHHHHCCCEEEEECCCCCH-------
T ss_conf 69999926788554210129-99997474788989989999------99899999996499779993797821-------
Q ss_pred HHHCCCEEEECC-CCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf 421893897500-7988875407999848992899999600005883325989999999863413689988999625762
Q gi|254780659|r 79 SQRHCKFLRPAN-YPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAET 157 (274)
Q Consensus 79 i~~~~~ilRP~N-~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEa 157 (274)
+.+... +....|... ++.. .+.++.++.-..... .+.+.......... ..+.
T Consensus 92 ------~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~--------- 144 (215)
T 2a22_A 92 ------IFNPDPESNGVFPEYV--VVQI-GEFKIGLMHGNQVLP----WDDPGSLEQWQRRL-----DCDI--------- 144 (215)
T ss_dssp ------CCBCCGGGTBCCCSEE--EEEE-TTEEEEEECSTTSSS----TTCHHHHHHHHHHH-----TCSE---------
T ss_pred ------HHHHHHHHHHHCCCEE--EEEE-CCEEEEEEEECCCCC----CCHHHHHHHHHHCC-----CCCE---------
T ss_conf ------3344367776299526--9986-452588873034366----41789999986524-----8999---------
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCC
Q ss_conf 28999999760895779980697624654564036728984056013
Q gi|254780659|r 158 TSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCG 204 (274)
Q Consensus 158 TSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG 204 (274)
++-.|||.|.... + ++ .++-..|-+|
T Consensus 145 -----------------~~~gh~h~~~~~~--~-~~-~~~inpGs~g 170 (215)
T 2a22_A 145 -----------------LVTGHTHKLRVFE--K-NG-KLFLNPGTAT 170 (215)
T ss_dssp -----------------EEECSSCCCEEEE--E-TT-EEEEECCCSS
T ss_pred -----------------EEECCCCCCCEEE--E-CC-EEEEECCCCC
T ss_conf -----------------9989888651899--9-99-9999689767
No 26
>>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} (A:)
Probab=79.67 E-value=3.4 Score=21.68 Aligned_cols=66 Identities=23% Similarity=0.258 Sum_probs=50.2
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE-EECHHH
Q ss_conf 926999720276889999998089888609989999170047886789999999983799899-934265
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI-TTGNHV 69 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi-T~GNH~ 69 (274)
||+.+||||=|.. ..+.+.|.++.-.-.-|-+|..|--...|-- +.+....+.++...++ -.|||-
T Consensus 1 Mri~vIGDIHG~~--~~L~~lL~~~~~~~~~d~Lv~lGD~idRGp~-s~~vl~~l~~~~~~~~~~~gnhe 67 (280)
T 2dfj_A 1 MATYLIGDVHGCY--DELIALLHKVEFTPGKDTLWLTGDLVARGPG-SLDVLRYVKSLGDSVRLVLGNHD 67 (280)
T ss_dssp -CEEEECCCCSCH--HHHHHHHHHTTCCTTTCEEEECSCCSSSSSC-HHHHHHHHHHTGGGEEECCCHHH
T ss_pred CCEEEEEECCCCH--HHHHHHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHHCCCCCEEEECCCC
T ss_conf 9889997156899--9999999966999889989993647069968-89999999963678389746884
No 27
>>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum 3D7} (A:)
Probab=74.80 E-value=3.8 Score=21.36 Aligned_cols=19 Identities=5% Similarity=-0.202 Sum_probs=8.1
Q ss_pred HHHHCCCCEEEECHHHHCC
Q ss_conf 9983799899934265302
Q gi|254780659|r 54 EMMETGIDVITTGNHVWDK 72 (274)
Q Consensus 54 ~l~~~GvDviT~GNH~wd~ 72 (274)
.+.++|+|.++...+..+.
T Consensus 82 ~a~~aGad~v~i~~~~~~~ 100 (227)
T 1tqx_A 82 LLKTSNQLTFHFEALNEDT 100 (227)
T ss_dssp GCTTSSEEEEEGGGGTTCH
T ss_pred HHHHCCCCEEEEEEECCCC
T ss_conf 7750576068874311433
No 28
>>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} (A:1-127)
Probab=70.31 E-value=8.2 Score=19.21 Aligned_cols=52 Identities=19% Similarity=0.272 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHH-CCCCEEEECHHH
Q ss_conf 9999998089888609989999170047886789999999983-799899934265
Q gi|254780659|r 15 RSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMME-TGIDVITTGNHV 69 (274)
Q Consensus 15 r~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~-~GvDviT~GNH~ 69 (274)
...+.++..+-.+++++||+|+-+-|++- -.|+-|+|+++ +|+-+|--|+-.
T Consensus 49 ~~~vv~~~~~~~~~~~pDf~I~isPN~aa---PGP~~ARE~l~~~giP~IvI~D~p 101 (127)
T 1qv9_A 49 VEAAVEXALDIAEDFEPDFIVYGGPNPAA---PGPSKAREXLADSEYPAVIIGDAP 101 (127)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECSCTTS---HHHHHHHHHHHTSSSCEEEEEEGG
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCHHHHHHHHHCCCCEEEECCCC
T ss_conf 99999976767874089989997899899---995779999874799879975885
No 29
>>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} (A:)
Probab=69.33 E-value=0.95 Score=25.30 Aligned_cols=62 Identities=16% Similarity=-0.024 Sum_probs=46.4
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCC-CCEEEECHHHH
Q ss_conf 92699972027688999999808988860998999917004788678999999998379-98999342653
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETG-IDVITTGNHVW 70 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~G-vDviT~GNH~w 70 (274)
|||++||||-|. .+++++.|..+++..+.|.+|-.|.-.. +.....+.... -.....|||-+
T Consensus 23 mri~visDiHG~--~~~l~~il~~i~~~~~~D~ii~lGD~v~------~g~~~~~~~~~~~~~~V~GN~d~ 85 (178)
T 2kkn_A 23 KRFLLISDSHVP--VRMASLPDEILNSLKEYDGVIGLGDYVD------LDTVILLEKFSKEFYGVHGNMDY 85 (178)
T ss_dssp EEEEEECCCCBT--TTTCCCCHHHHHGGGGCSEEEESSCBSC------HHHHHHHHHHTSSEEECCCSSSC
T ss_pred CEEEEECCCCCC--CCCHHHHHHHHHHHCCCCEEEECCCCCC------HHHHHHHHHCCCCEEEECCCCCC
T ss_conf 199999778987--6400242999987247899998788516------11677887416866995067563
No 30
>>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} (A:)
Probab=68.29 E-value=9.1 Score=18.94 Aligned_cols=17 Identities=18% Similarity=0.133 Sum_probs=9.3
Q ss_pred HHHHHHHHCCCCEEEEC
Q ss_conf 99999983799899934
Q gi|254780659|r 50 KIFCEMMETGIDVITTG 66 (274)
Q Consensus 50 ~~~~~l~~~GvDviT~G 66 (274)
+..+.+.+.|+|+|-.+
T Consensus 23 ~~~~~~~~~G~~~i~i~ 39 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMD 39 (228)
T ss_dssp HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHCCCCEEEEE
T ss_conf 99999997599989997
No 31
>>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae TIGR4} (A:)
Probab=68.00 E-value=6.5 Score=19.88 Aligned_cols=40 Identities=25% Similarity=0.360 Sum_probs=30.5
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCC
Q ss_conf 92699972027688999999808988860998999917004788
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGG 44 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G 44 (274)
|||++|+|+=|. +.++++.|..+++. +|.+|..|.-...|
T Consensus 7 mki~visD~Hg~--~~al~~~l~~~~~~--~d~ii~~GD~~~~~ 46 (176)
T 3ck2_A 7 QTIIVXSDSHGD--SLIVEEVRDRYVGK--VDAVFHNGDSELRP 46 (176)
T ss_dssp EEEEEECCCTTC--HHHHHHHHHHHTTT--SSEEEECSCCCSCT
T ss_pred CEEEEEECCCCC--HHHHHHHHHHHHCC--CCEEEECCCEECCC
T ss_conf 699999437899--78999999987659--98999789566364
No 32
>>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} (A:)
Probab=67.66 E-value=1.7 Score=23.63 Aligned_cols=63 Identities=19% Similarity=0.203 Sum_probs=42.4
Q ss_pred CEEEEEEECCCHHH-HHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf 92699972027688-999999808988860998999917004788678999999998379989993426530
Q gi|254780659|r 1 MRLLFLGDIVGKTG-RSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD 71 (274)
Q Consensus 1 MkiLfiGDIvG~~G-r~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd 71 (274)
|||++|+|+=|..- .+.+.+.+. ..++.++|.+|.-|.- +....++.|.+.+..++- |||-+|
T Consensus 11 mrI~viSDiHg~~~al~~~~~~l~-~~~~~~~D~ii~~GD~------~~~~~~~~l~~l~~~~i~-v~gn~d 74 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKK-LLVPGKIQHILCTGNL------CTKESYDYLKTLAGDVHI-VRGDFD 74 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHT-TCCTTSCSEEEECSCC------BSHHHHHHHHHHCSEEEE-CCCTTC
T ss_pred EEEEEEEECCCCCCCHHHHHHHHH-HHCCCCCCEEEECCCC------CCHHHHHHHHHHCCCEEE-ECCCCC
T ss_conf 399999007888751026799999-8532698999999679------744349999854997799-727743
No 33
>>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} (A:)
Probab=66.92 E-value=5.5 Score=20.35 Aligned_cols=14 Identities=14% Similarity=0.230 Sum_probs=7.4
Q ss_pred HHHHHHHHCCCCEE
Q ss_conf 99999983799899
Q gi|254780659|r 50 KIFCEMMETGIDVI 63 (274)
Q Consensus 50 ~~~~~l~~~GvDvi 63 (274)
++.+++.++|++++
T Consensus 33 ~~~~~~~~~gv~~i 46 (221)
T 1yad_A 33 ARIIITIQNEVDFI 46 (221)
T ss_dssp HHHHHHHGGGCSEE
T ss_pred HHHHHHHHCCCCEE
T ss_conf 99999997899999
No 34
>>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp} (A:)
Probab=66.85 E-value=4.4 Score=20.96 Aligned_cols=74 Identities=23% Similarity=0.315 Sum_probs=32.8
Q ss_pred CCCEEEEECCCCCHH---HHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEE----CCCCCCCHHHCCCCCHHHH
Q ss_conf 998899962576228---999999760895779980697624654564036728984----0560137121035474678
Q gi|254780659|r 145 QADVIVFDFHAETTS---EKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYIT----DLGMCGDYNSSIGLDKEEP 217 (274)
Q Consensus 145 ~~~~i~VDfHaEaTS---EK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiT----DvGMtG~~~SVIG~~~~~~ 217 (274)
.++.+. +|++... +-......+....-.++..||..... +-...+..|+. ..+-++...+.-+......
T Consensus 109 ga~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (246)
T 3inp_A 109 GATSIV--FHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCL--KYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKE 184 (246)
T ss_dssp TCSEEE--ECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGG--TTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHH
T ss_pred CCCEEE--ECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHH--HHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 985788--422101178999999987498437898515551016--6777644224788842687631023556778899
Q ss_pred HHHHH
Q ss_conf 98885
Q gi|254780659|r 218 INRFI 222 (274)
Q Consensus 218 i~rf~ 222 (274)
...++
T Consensus 185 ~~~~~ 189 (246)
T 3inp_A 185 ISKWI 189 (246)
T ss_dssp HHHHH
T ss_pred HHHHC
T ss_conf 98760
No 35
>>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482} (A:)
Probab=62.94 E-value=4.3 Score=21.04 Aligned_cols=28 Identities=25% Similarity=0.433 Sum_probs=12.0
Q ss_pred CCCHHHHHHHHHCCCCEEEECHHHHCCC
Q ss_conf 7899999999837998999342653022
Q gi|254780659|r 46 GITEKIFCEMMETGIDVITTGNHVWDKR 73 (274)
Q Consensus 46 Git~~~~~~l~~~GvDviT~GNH~wd~k 73 (274)
|+|++.+.+++++|+|.+-.|.-+|..+
T Consensus 152 GI~~~ni~~~~~aGa~~v~vgs~i~~~~ 179 (210)
T 3ceu_A 152 GINEDNLLEIKDFGFGGAVVLGDLWNKF 179 (210)
T ss_dssp SCCTTTHHHHHHTTCSEEEESHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCEEEEEHHHHCCC
T ss_conf 8899999999983998899869997699
No 36
>>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} (A:)
Probab=62.77 E-value=6.7 Score=19.78 Aligned_cols=53 Identities=9% Similarity=0.004 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC---HHHHHHH--HHHHCCCEEEEEECCCCCCCC
Q ss_conf 25989999999863413689988999625762---2899999--976089577998069762465
Q gi|254780659|r 126 LDDPFRTADKILATCPLKEQADVIVFDFHAET---TSEKQCF--AHFVDSRASLVVGTHTHIPTA 185 (274)
Q Consensus 126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEa---TSEK~A~--g~~lDGrVsaVvGTHTHV~Ta 185 (274)
+|.|...++.+.+. .+|.+ -||+|+ |.+..++ ..-...++...+--+|.+...
T Consensus 75 ~~~~~~~i~~~~~~-----Gad~i--~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 132 (224)
T 2bdq_A 75 LRIXEEDILRAVEL-----ESDAL--VLGILTSNNHIDTEAIEQLLPATQGLPLVFHXAFDVIPK 132 (224)
T ss_dssp HHHHHHHHHHHHHT-----TCSEE--EECCBCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCT
T ss_pred HHHHHHHHHHHHHH-----CCCEE--EEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCH
T ss_conf 99999999999980-----99845--999887877647999999999729977187058871110
No 37
>>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} (A:)
Probab=61.51 E-value=9.2 Score=18.90 Aligned_cols=97 Identities=10% Similarity=0.034 Sum_probs=46.5
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECH---HHHCC-CCHHHHHHHCC--CEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEE
Q ss_conf 867899999999837998999342---65302-22047542189--3897500798887540799984899289999960
Q gi|254780659|r 44 GFGITEKIFCEMMETGIDVITTGN---HVWDK-REALVFSQRHC--KFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIM 117 (274)
Q Consensus 44 G~Git~~~~~~l~~~GvDviT~GN---H~wd~-kei~~~i~~~~--~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~ 117 (274)
...-..+.+++|.+.|+|.|-.|= |.-++ .+...-+.+.. .++-|.-.+.-.+| -..+.+..||
T Consensus 18 d~~~~~~~l~~l~~~g~d~ihigi~Dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~l~ 87 (234)
T 2f6u_A 18 DRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQYGLPIVVEPSDPSNVVYD----------VDYLFVPTVL 87 (234)
T ss_dssp TSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTTSCCCEEECCSSCCCCCCC----------SSEEEEEEET
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHC----------CCCCCEEEEE
T ss_conf 998589999999975999999858864457669999999997399768651668887633----------4765204776
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 000588332598999999986341368998899962576228999999
Q gi|254780659|r 118 GRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFA 165 (274)
Q Consensus 118 Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g 165 (274)
=. +|-..++.+.+. .. -.+.||+|++.|....-
T Consensus 88 ~~--------~~~~~~~~~~~~-----g~--~~i~~~~e~~~~~~~~i 120 (234)
T 2f6u_A 88 NS--------ADGDWITGKHAQ-----WV--RMHYENLQKFTEIIESE 120 (234)
T ss_dssp TB--------SBGGGTTHHHHH-----HH--HTTGGGHHHHHHHHHST
T ss_pred CC--------CCCHHCCCHHHH-----HH--HHHHHCCCCEEEECCCC
T ss_conf 36--------791120337999-----99--99983688457868970
No 38
>>3g1v_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, D70G; HET: 5FU; 1.30A {Methanothermobacter thermautotrophicusstr} PDB: 3g1s_A* 3g1x_A* 1kly_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3g1a_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 1loq_A* 1lor_A* 1km0_A* 1dv7_A 2zz3_A* 1km1_A* 1km6_A* 1km5_A* ... (A:)
Probab=59.39 E-value=11 Score=18.50 Aligned_cols=72 Identities=14% Similarity=0.034 Sum_probs=25.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHH---HCCCEEEEEECC--CCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHH
Q ss_conf 99889996257622899999976---089577998069--762465456403672898405601371210354746789
Q gi|254780659|r 145 QADVIVFDFHAETTSEKQCFAHF---VDSRASLVVGTH--THIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPI 218 (274)
Q Consensus 145 ~~~~i~VDfHaEaTSEK~A~g~~---lDGrVsaVvGTH--THV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i 218 (274)
.+|.+. +|.+..+|-...... ...+.-.++.-+ .......+.....-.-+.+..+-+|...-.-..+....+
T Consensus 91 gad~v~--v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 167 (228)
T 3g1v_A 91 GADAII--VHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRL 167 (228)
T ss_dssp TCSEEE--EESTTCHHHHHHHHHHHHHHTCEEEEECSCSSGGGGTTHHHHHHHHHHHHHHTTCCEEECCTTCHHHHHHH
T ss_pred CCCEEE--EECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHH
T ss_conf 998999--86138978999999998851884034101146517777777999999999983887302355799999999
No 39
>>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} (A:)
Probab=59.35 E-value=6 Score=20.12 Aligned_cols=28 Identities=18% Similarity=0.330 Sum_probs=20.6
Q ss_pred CCCCHHHHHHHHHCCCCEEEECHH--HHCC
Q ss_conf 678999999998379989993426--5302
Q gi|254780659|r 45 FGITEKIFCEMMETGIDVITTGNH--VWDK 72 (274)
Q Consensus 45 ~Git~~~~~~l~~~GvDviT~GNH--~wd~ 72 (274)
+.--.+.++.|.+.|+|.|..|+= .++.
T Consensus 19 ~~~~~~~l~~l~~~Gvd~i~i~~~d~~~~~ 48 (240)
T 1viz_A 19 KDLPDEQLEILCESGTDAVIIGGSDGVTED 48 (240)
T ss_dssp SCCCHHHHHHHHTSCCSEEEECC----CHH
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 975899999999829999998798864444
No 40
>>1fs0_G ATP synthase gamma subunit; coiled coil, epsilon, hydrolase; 2.10A {Escherichia coli} (G:)
Probab=59.30 E-value=3.4 Score=21.70 Aligned_cols=22 Identities=27% Similarity=0.446 Sum_probs=11.1
Q ss_pred ECCCCCCCHHHCCCCCHHHHHH
Q ss_conf 4056013712103547467898
Q gi|254780659|r 198 TDLGMCGDYNSSIGLDKEEPIN 219 (274)
Q Consensus 198 TDvGMtG~~~SVIG~~~~~~i~ 219 (274)
+|-|+||+|||-+-..-+..++
T Consensus 65 SDrGLCG~fN~~i~k~~~~~i~ 86 (230)
T 1fs0_G 65 TDRGLCGGLNINLFKKLLAEMK 86 (230)
T ss_dssp CSSSCSTTHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7986651543999999999987
No 41
>>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose phosphate pathway; 2.30A {Solanum tuberosum} (A:)
Probab=58.62 E-value=14 Score=17.80 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=8.1
Q ss_pred HHHHHHHHHCCCCEEEE
Q ss_conf 99999998379989993
Q gi|254780659|r 49 EKIFCEMMETGIDVITT 65 (274)
Q Consensus 49 ~~~~~~l~~~GvDviT~ 65 (274)
.+.++.+.+.|+|.|..
T Consensus 26 ~~~~~~~~~~G~~~i~i 42 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHV 42 (230)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHCCCCEEEE
T ss_conf 99999999759988999
No 42
>>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} (A:)
Probab=58.62 E-value=7.8 Score=19.38 Aligned_cols=19 Identities=21% Similarity=0.162 Sum_probs=13.4
Q ss_pred HHHHHHHHHCCCCEEEECH
Q ss_conf 9999999837998999342
Q gi|254780659|r 49 EKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 49 ~~~~~~l~~~GvDviT~GN 67 (274)
.+.++++.++|+|.|-.+-
T Consensus 29 ~~~~~~~~~~G~~~i~i~~ 47 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRI 47 (215)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHCCCCEEEECC
T ss_conf 9999999987998999827
No 43
>>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} (A:164-276)
Probab=57.96 E-value=13 Score=17.93 Aligned_cols=21 Identities=38% Similarity=0.490 Sum_probs=9.7
Q ss_pred CCCHHHHHHHHHCCCCEEEEC
Q ss_conf 789999999983799899934
Q gi|254780659|r 46 GITEKIFCEMMETGIDVITTG 66 (274)
Q Consensus 46 Git~~~~~~l~~~GvDviT~G 66 (274)
|||++.+.++.++|+|+|-.|
T Consensus 89 GIt~~~i~~~~~aGad~i~vg 109 (113)
T 2jbm_A 89 GITLDNLPQFCGPHIDVISMG 109 (113)
T ss_dssp SCCTTTHHHHCCTTCCEEECT
T ss_pred CCCHHHHHHHHHCCCCEEECC
T ss_conf 998999999997399999859
No 44
>>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} (A:143-285)
Probab=57.58 E-value=10 Score=18.58 Aligned_cols=22 Identities=36% Similarity=0.656 Sum_probs=15.9
Q ss_pred CCCHHHHHHHHHCCCCEEEECH
Q ss_conf 7899999999837998999342
Q gi|254780659|r 46 GITEKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 46 Git~~~~~~l~~~GvDviT~GN 67 (274)
||+++...+++++|+|.+-+|-
T Consensus 118 GI~~~~i~~~~~aGad~v~~gs 139 (143)
T 1qap_A 118 NVTAETLREFAETGVDFISVGA 139 (143)
T ss_dssp CSCHHHHHHHHHTTCSEEECSH
T ss_pred CCCHHHHHHHHHCCCCEEECCH
T ss_conf 9999999999975989998285
No 45
>>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A* (A:)
Probab=56.86 E-value=6.1 Score=20.06 Aligned_cols=17 Identities=12% Similarity=0.317 Sum_probs=8.9
Q ss_pred HHHHHHHHCCCCEEEEC
Q ss_conf 99999983799899934
Q gi|254780659|r 50 KIFCEMMETGIDVITTG 66 (274)
Q Consensus 50 ~~~~~l~~~GvDviT~G 66 (274)
+.++++.++|+|+|..-
T Consensus 23 ~~~~~~~~aG~d~i~l~ 39 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIP 39 (212)
T ss_dssp HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHCCCCEEEEE
T ss_conf 99999998699989995
No 46
>>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} (A:)
Probab=56.62 E-value=14 Score=17.64 Aligned_cols=16 Identities=19% Similarity=0.217 Sum_probs=8.2
Q ss_pred HHHHHHHHCCCCEEEE
Q ss_conf 9999998379989993
Q gi|254780659|r 50 KIFCEMMETGIDVITT 65 (274)
Q Consensus 50 ~~~~~l~~~GvDviT~ 65 (274)
..++.+.++|+|.+|-
T Consensus 96 ~~~~~~~~~gaD~vtv 111 (255)
T 3ldv_A 96 KAVKAAAELGVWMVNV 111 (255)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCEEEE
T ss_conf 9999987407778997
No 47
>>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} (A:)
Probab=55.48 E-value=7 Score=19.69 Aligned_cols=35 Identities=6% Similarity=0.149 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHCCCCEEEECH---HHHCCCCHHHHHHH
Q ss_conf 899999999837998999342---65302220475421
Q gi|254780659|r 47 ITEKIFCEMMETGIDVITTGN---HVWDKREALVFSQR 81 (274)
Q Consensus 47 it~~~~~~l~~~GvDviT~GN---H~wd~kei~~~i~~ 81 (274)
-..+.++++.+.|+|+|-.+. +.....+....+.+
T Consensus 32 ~~~~~a~~~~~~G~~~i~i~~~~~~~~~~~~~~~~~~~ 69 (227)
T 2tps_A 32 DPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEK 69 (227)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 88999999998799499987888540457999999999
No 48
>>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} (A:)
Probab=54.96 E-value=7.9 Score=19.31 Aligned_cols=70 Identities=13% Similarity=0.075 Sum_probs=36.1
Q ss_pred CCCEEEE-ECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHC-CCCEEEE-ECCCCCCCHHHCCCCCH
Q ss_conf 9988999-625762289999997608957799806976246545640-3672898-40560137121035474
Q gi|254780659|r 145 QADVIVF-DFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQIL-DGGTGYI-TDLGMCGDYNSSIGLDK 214 (274)
Q Consensus 145 ~~~~i~V-DfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rIL-p~GTayi-TDvGMtG~~~SVIG~~~ 214 (274)
.++.+++ ....+...|-.....-+....-..+..|++.....+... ....+|. .-.|.|+....--....
T Consensus 84 gad~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (220)
T 2fli_A 84 GADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEK 156 (220)
T ss_dssp TCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH
T ss_conf 9979983143333668899999854964799961786423667688644868899975555666420245788
No 49
>>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} (A:)
Probab=51.80 E-value=9.5 Score=18.80 Aligned_cols=53 Identities=13% Similarity=-0.031 Sum_probs=39.9
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCC-EEEECCCCC
Q ss_conf 47886789999999983799899934265302220475421893-897500798
Q gi|254780659|r 41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCK-FLRPANYPP 93 (274)
Q Consensus 41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~-ilRP~N~p~ 93 (274)
+++|+||...+++.|.+.|.+|+-.+...=..++..+.++...+ +.-+++...
T Consensus 39 assG~gIG~aia~~la~~Ga~Vvl~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 92 (293)
T 3grk_A 39 VANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD 92 (293)
T ss_dssp CCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 999965999999999986999999838779999999987406863776313488
No 50
>>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} (A:)
Probab=51.18 E-value=4 Score=21.23 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=65.6
Q ss_pred CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCC-------CCEEEEECCCCCEEEEEEE---E
Q ss_conf 99999999837998999342653022204754218938975007988875-------4079998489928999996---0
Q gi|254780659|r 48 TEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTPG-------NGSGLYCAKNGSNVLVANI---M 117 (274)
Q Consensus 48 t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG-------~G~~i~~~~~g~ki~Vinl---~ 117 (274)
..+.+++|.++|+|+|-.--.-.+..+++..+.+...++.-....--.+. .|...+.... .-..+.+. .
T Consensus 31 ~~~~~~~l~~aG~~~i~l~~~~~~~~~~i~~i~~~~~~~~~~~~~v~~~~~~~~~~~agad~v~~~~-~~~~~~~~~~~~ 109 (224)
T 1vhc_A 31 ILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG-LNPKIVKLCQDL 109 (224)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS-CCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEECCC-CCHHHHHHHHHC
T ss_conf 9999999998799989996788269999999998289845876403657999999971687877898-889999999856
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHH----HCCCEEEEEECC
Q ss_conf 00058833259899999998634136899889996257622899999976----089577998069
Q gi|254780659|r 118 GRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHF----VDSRASLVVGTH 179 (274)
Q Consensus 118 Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~----lDGrVsaVvGTH 179 (274)
|...+ +.+.+|......... .+|++.+ +.++.|..|..+-.. .+-.+-+.=|-.
T Consensus 110 ~~~~~-~~~~t~~e~~~a~~~------~~d~i~~-~~~~~~~~~~~~~~~~~~~~~~pi~a~GGI~ 167 (224)
T 1vhc_A 110 NFPIT-PGVNNPXAIEIALEX------GISAVKF-FPAEASGGVKXIKALLGPYAQLQIXPTGGIG 167 (224)
T ss_dssp TCCEE-CEECSHHHHHHHHHT------TCCEEEE-TTTTTTTHHHHHHHHHTTTTTCEEEEBSSCC
T ss_pred CCCCC-CCCCCHHHHHHHHHC------CCCEEEE-CCCCCCCCHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 99716-885889999999983------9996997-4643336899999885603487288507989
No 51
>>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} (A:)
Probab=51.11 E-value=18 Score=17.03 Aligned_cols=60 Identities=12% Similarity=0.108 Sum_probs=25.6
Q ss_pred HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEE-CHHHHC-CCCHHHHHHHCC
Q ss_conf 9808988860998999917004788678999999998379989993-426530-222047542189
Q gi|254780659|r 20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITT-GNHVWD-KREALVFSQRHC 83 (274)
Q Consensus 20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~-GNH~wd-~kei~~~i~~~~ 83 (274)
+.+..+++....-+++...-+... .....+...++|+|.+|. +.+.-+ -++....+.+..
T Consensus 42 ~~i~~l~~~~~~~~~~~~~~~~~~----~~~~~~~a~~~gad~i~vh~~~~~~~~~~~~~~~~~~~ 103 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDG----GHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG 103 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSC----HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHCCCC----CCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHC
T ss_conf 799999986352456565320347----50477765104588899952114667888999876423
No 52
>>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreductase; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A* (A:)
Probab=50.32 E-value=13 Score=18.03 Aligned_cols=14 Identities=14% Similarity=-0.047 Sum_probs=5.0
Q ss_pred HHHHHHHCCCCEEE
Q ss_conf 99999837998999
Q gi|254780659|r 51 IFCEMMETGIDVIT 64 (274)
Q Consensus 51 ~~~~l~~~GvDviT 64 (274)
.+...-.+|+-..+
T Consensus 102 lA~aa~~~g~~~~l 115 (368)
T 2nli_A 102 TARAVSEFGTIMSI 115 (368)
T ss_dssp HHHHHHHHTCCEEE
T ss_pred HHHHHHHCCCCEEC
T ss_conf 99988753855010
No 53
>>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} (A:786-1226)
Probab=49.35 E-value=19 Score=16.85 Aligned_cols=15 Identities=13% Similarity=0.080 Sum_probs=6.1
Q ss_pred HHHHHHHCCCCEEEE
Q ss_conf 999998379989993
Q gi|254780659|r 51 IFCEMMETGIDVITT 65 (274)
Q Consensus 51 ~~~~l~~~GvDviT~ 65 (274)
.+..--.+|....++
T Consensus 103 la~aa~~~g~~~~l~ 117 (441)
T 1ofd_A 103 LAIAMNRLGAKSNSG 117 (441)
T ss_dssp HHHHHHHHTCBCEEC
T ss_pred HHHHHHHHCCCCCCC
T ss_conf 999999848803477
No 54
>>2jjy_A Enoyl-[acyl-carrier-protein] reductase; NAD, FABI, oxidoreductase, enoyl reductase, fatty acid biosynthesis; HET: NAD; 2.90A {Francisella tularensis} (A:)
Probab=49.13 E-value=19 Score=16.87 Aligned_cols=79 Identities=10% Similarity=-0.035 Sum_probs=49.3
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCE--EEEECCCCCEEEEEEEEH
Q ss_conf 478867899999999837998999342653022204754218938975007988875407--999848992899999600
Q gi|254780659|r 41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGS--GLYCAKNGSNVLVANIMG 118 (274)
Q Consensus 41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG~G~--~i~~~~~g~ki~Vinl~G 118 (274)
|+++.||...++.+|.+.|.+|+-..-..-...+.........-...+++.....--... .+... .|.--.++|..|
T Consensus 14 Aag~~GIG~aiA~~la~~Ga~vvi~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~~d~lv~nag 92 (268)
T 2jjy_A 14 LLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV-WDGLDAIVHSIA 92 (268)
T ss_dssp CCSTTCHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH-CSSCCEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHH-CCCCEEEEEEEE
T ss_conf 8878589999999999879999999589439999999863497401110012378899999999986-498316776530
Q ss_pred HH
Q ss_conf 00
Q gi|254780659|r 119 RV 120 (274)
Q Consensus 119 r~ 120 (274)
..
T Consensus 93 ~~ 94 (268)
T 2jjy_A 93 FA 94 (268)
T ss_dssp CC
T ss_pred CC
T ss_conf 14
No 55
>>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A* (A:117-261)
Probab=47.64 E-value=9.1 Score=18.95 Aligned_cols=22 Identities=23% Similarity=0.379 Sum_probs=14.9
Q ss_pred CCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 6789999999983799899934
Q gi|254780659|r 45 FGITEKIFCEMMETGIDVITTG 66 (274)
Q Consensus 45 ~Git~~~~~~l~~~GvDviT~G 66 (274)
-|||++...++.++|+|+|-.|
T Consensus 120 GGIt~~~i~~~~~aGa~~i~vg 141 (145)
T 2b7n_A 120 GNISLESINAYAKSGVDAISVG 141 (145)
T ss_dssp SSCCTTTHHHHHTTTCSEEECT
T ss_pred CCCCHHHHHHHHHCCCCEEECC
T ss_conf 9999999999997699999838
No 56
>>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, structural genomics, NPPSFA; 1.60A {Pyrococcus horikoshii OT3} (A:)
Probab=47.60 E-value=18 Score=17.02 Aligned_cols=39 Identities=3% Similarity=-0.091 Sum_probs=21.2
Q ss_pred EEECCCCCHHHHHHHHHHH-CCCEEEEEECCCCCCCCHHH
Q ss_conf 9962576228999999760-89577998069762465456
Q gi|254780659|r 150 VFDFHAETTSEKQCFAHFV-DSRASLVVGTHTHIPTADAQ 188 (274)
Q Consensus 150 ~VDfHaEaTSEK~A~g~~l-DGrVsaVvGTHTHV~TaD~r 188 (274)
.+-+|.|++.+-..-+.-. .-.+-.++.+||-....+..
T Consensus 81 ~~~vh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (208)
T 2czd_A 81 YVIVHTFVGRDSVMAVKELGEIIMVVEMSHPGALEFINPL 120 (208)
T ss_dssp EEEEESTTCHHHHHHHHTTSEEEEECCCCSGGGGTTTGGG
T ss_pred EEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHH
T ss_conf 6544201479999864420232211102667643211259
No 57
>>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} (A:)
Probab=47.46 E-value=16 Score=17.28 Aligned_cols=46 Identities=4% Similarity=0.055 Sum_probs=32.6
Q ss_pred HHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf 808988860998999917004788678999999998379989993426530
Q gi|254780659|r 21 MLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD 71 (274)
Q Consensus 21 ~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd 71 (274)
.+.++++......++.= .+...+++.+.++.++|+|.|+.+||...
T Consensus 172 ~~~~~~~~~~~p~~~k~-----~~~~~~~~~a~~l~~~Gad~i~v~~~~g~ 217 (332)
T 1vcf_A 172 ERLAELLPLPFPVXVKE-----VGHGLSREAALALRDLPLAAVDVAGAGGT 217 (332)
T ss_dssp HHHHHHCSCSSCEEEEC-----SSSCCCHHHHHHHTTSCCSEEECCCBTSC
T ss_pred HHHHHHCCCCCCCCCCC-----CCCCCCHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 99998602588860200-----06756799999999749999997888787
No 58
>>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} (A:22-251)
Probab=47.21 E-value=12 Score=18.22 Aligned_cols=32 Identities=16% Similarity=0.074 Sum_probs=15.0
Q ss_pred CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHH
Q ss_conf 99999999837998999342653022204754
Q gi|254780659|r 48 TEKIFCEMMETGIDVITTGNHVWDKREALVFS 79 (274)
Q Consensus 48 t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i 79 (274)
..+.+......|+|.+.....-+.-.+.+..+
T Consensus 41 ~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~i 72 (230)
T 1i4n_A 41 SLEDFIRMYDELADAISILTEKHYFKGDPAFV 72 (230)
T ss_dssp CHHHHHHHHHHHCSEEEEECCCSSSCCCTHHH
T ss_pred CHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH
T ss_conf 99999999845488899964778789999999
No 59
>>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} (A:95-486)
Probab=46.82 E-value=14 Score=17.64 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=12.0
Q ss_pred CCCHHHHHHHHHCCCCEEEECHH
Q ss_conf 78999999998379989993426
Q gi|254780659|r 46 GITEKIFCEMMETGIDVITTGNH 68 (274)
Q Consensus 46 Git~~~~~~l~~~GvDviT~GNH 68 (274)
+++.+.++.+.++|+|.|+.+||
T Consensus 257 ~~~~~~A~~~~~~G~d~i~v~g~ 279 (392)
T 1kbi_A 257 VQRTEDVIKAAEIGVSGVVLSNH 279 (392)
T ss_dssp ECSHHHHHHHHHTTCSEEEECCT
T ss_pred CCCHHHHHHHHHCCCCCEEEECC
T ss_conf 33489899998548874465044
No 60
>>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis} (A:143-284)
Probab=45.89 E-value=10 Score=18.66 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=11.2
Q ss_pred CCCHHHHHHHHHCCCCEEEEC
Q ss_conf 789999999983799899934
Q gi|254780659|r 46 GITEKIFCEMMETGIDVITTG 66 (274)
Q Consensus 46 Git~~~~~~l~~~GvDviT~G 66 (274)
|||++...+++++|+|++-+|
T Consensus 117 GI~~~ni~~~~~~Gad~v~~g 137 (142)
T 3l0g_A 117 CVNIRNVRNIALTGVDYISIG 137 (142)
T ss_dssp SCCTTTHHHHHTTTCSEEECG
T ss_pred CCCHHHHHHHHHCCCCEEECC
T ss_conf 999999999997599999869
No 61
>>2hld_G ATP synthase gamma chain, mitochondrial; ATP phosphorylase (H+ transporting), F1FO, F1- ATPase, hydrolase; HET: ANP; 2.80A {Saccharomyces cerevisiae} PDB: 3fks_G (G:)
Probab=45.25 E-value=6.8 Score=19.77 Aligned_cols=11 Identities=45% Similarity=1.053 Sum_probs=4.3
Q ss_pred ECCCCCCCHHH
Q ss_conf 40560137121
Q gi|254780659|r 198 TDLGMCGDYNS 208 (274)
Q Consensus 198 TDvGMtG~~~S 208 (274)
||-|+||+|+|
T Consensus 79 SDrGLCG~fN~ 89 (278)
T 2hld_G 79 SDKGLCGSIHS 89 (278)
T ss_dssp CSCCCSTTHHH
T ss_pred CCCCHHHHHHH
T ss_conf 89750677899
No 62
>>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4S cluster; HET: SAM; 2.07A {Escherichia coli} (A:1-364)
Probab=44.89 E-value=22 Score=16.41 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=50.9
Q ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCC
Q ss_conf 6999720276889999998089888609989999170047886789999999983799899934265302
Q gi|254780659|r 3 LLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDK 72 (274)
Q Consensus 3 iLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~ 72 (274)
+.|.++-.....+..+.+.+..+++..+.... .--...+.+..++++..+.|.++|++.|+.|=.+.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~e~~~~l~~~G~~~i~ig~es~~~ 176 (364)
T 1olt_A 108 LHWGGGTPTYLNKAQISRLMKLLRENFQFNAD-AEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNK 176 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCEEEE-EEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCH
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC-CEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 99748751659999999999999986577766-2147983499872778999973799879983686867
No 63
>>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii DSM2661} (A:)
Probab=44.87 E-value=22 Score=16.41 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=33.1
Q ss_pred HHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf 80898886099899991700478867899999999837998999342
Q gi|254780659|r 21 MLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 21 ~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GN 67 (274)
.+..+++..++-+.--|.-....+.-.....++.|.++|+|.+-.+.
T Consensus 44 ~l~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G~~~v~l~~ 90 (219)
T 2h6r_A 44 DLRMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINH 90 (219)
T ss_dssp THHHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESB
T ss_pred HHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECC
T ss_conf 99999950797064262451569873011008999886520311135
No 64
>>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens} (A:)
Probab=44.49 E-value=9.5 Score=18.81 Aligned_cols=21 Identities=14% Similarity=0.047 Sum_probs=12.9
Q ss_pred CHHHHHHHHHCCCCEEEECHH
Q ss_conf 999999998379989993426
Q gi|254780659|r 48 TEKIFCEMMETGIDVITTGNH 68 (274)
Q Consensus 48 t~~~~~~l~~~GvDviT~GNH 68 (274)
+.+.++.+-+.|+|.|-.++-
T Consensus 48 s~~~~~~~~~~gad~idi~d~ 68 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELCSG 68 (287)
T ss_dssp SHHHHHHHHHHTCSEEEECBC
T ss_pred CHHHHHHHHHCCCCEEECCCC
T ss_conf 999999999859999983027
No 65
>>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.30A {Pseudomonas syringae PV} (A:)
Probab=43.49 E-value=18 Score=17.00 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=19.4
Q ss_pred CCCCCCCHH---HHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCC
Q ss_conf 788678999---999998379989993426530222047542189
Q gi|254780659|r 42 AGGFGITEK---IFCEMMETGIDVITTGNHVWDKREALVFSQRHC 83 (274)
Q Consensus 42 a~G~Git~~---~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~ 83 (274)
|-|-|=|-. -+.++++.|+||+-+-=.+..++|...+++.-+
T Consensus 14 apGVGKTy~ML~~A~~l~~~G~DVVvG~vEthgR~eT~~l~~gLe 58 (228)
T 2r8r_A 14 APGVGKTYAXLQAAHAQLRQGVRVXAGVVETHGRAETEALLNGLP 58 (228)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCCTTCHHHHHHHTTSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCC
T ss_conf 998768999999999999779956999950699499999975877
No 66
>>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} (A:)
Probab=42.38 E-value=12 Score=18.16 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=18.3
Q ss_pred HHHHHHHHHCCCCEEEECH---HHHCCCCHHHHHHHCC
Q ss_conf 9999999837998999342---6530222047542189
Q gi|254780659|r 49 EKIFCEMMETGIDVITTGN---HVWDKREALVFSQRHC 83 (274)
Q Consensus 49 ~~~~~~l~~~GvDviT~GN---H~wd~kei~~~i~~~~ 83 (274)
.+.++.+.++|+|+|-..- |.+...+......+.+
T Consensus 25 ~~~~~~~~~aG~d~i~l~~~~~~~~~~~~~~~~~~~~~ 62 (205)
T 1wa3_A 25 KEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKG 62 (205)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTT
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCC
T ss_conf 99999999879988999679961789999998730898
No 67
>>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; YP_263340.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4} (A:1-119)
Probab=42.31 E-value=24 Score=16.16 Aligned_cols=21 Identities=19% Similarity=-0.140 Sum_probs=9.2
Q ss_pred CCCCCHHH--HHHHHHCCCCEEE
Q ss_conf 86789999--9999837998999
Q gi|254780659|r 44 GFGITEKI--FCEMMETGIDVIT 64 (274)
Q Consensus 44 G~Git~~~--~~~l~~~GvDviT 64 (274)
|.|.|-.. |.-|.+.|.+|.-
T Consensus 26 GlG~sG~salA~~L~~~G~~V~~ 48 (119)
T 3hn7_A 26 GICGTFXGSLALLARALGHTVTG 48 (119)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEE
T ss_pred EECHHHHHHHHHHHHHCCCEEEE
T ss_conf 67889999999999968994999
No 68
>>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} (A:)
Probab=42.00 E-value=25 Score=16.13 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=19.2
Q ss_pred CEEEECCEECC--CCCCCC--HHHHHHHH-HCCCCEEEECHHH
Q ss_conf 89999170047--886789--99999998-3799899934265
Q gi|254780659|r 32 DFVIANGENSA--GGFGIT--EKIFCEMM-ETGIDVITTGNHV 69 (274)
Q Consensus 32 DfvIaNgENaa--~G~Git--~~~~~~l~-~~GvDviT~GNH~ 69 (274)
-|||+|--..- .+..+- .+.+.+.- ..+++++|-.+..
T Consensus 7 ~~v~~n~K~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 49 (225)
T 1hg3_A 7 PIIAINFKTYIEATGKRALEIAKAAEKVYKETGVTIVVAPQLV 49 (225)
T ss_dssp SEEEEECTBCGGGSHHHHHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHH
T ss_conf 7899998437597899999999998742344794699928788
No 69
>>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} (A:780-1191)
Probab=41.67 E-value=25 Score=16.09 Aligned_cols=28 Identities=0% Similarity=-0.003 Sum_probs=13.7
Q ss_pred EEEECCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 9996257622899999976089577998
Q gi|254780659|r 149 IVFDFHAETTSEKQCFAHFVDSRASLVV 176 (274)
Q Consensus 149 i~VDfHaEaTSEK~A~g~~lDGrVsaVv 176 (274)
+.+-.-+-.++++.|..-.--|--..++
T Consensus 217 ~~~~v~g~~~~~~~a~~~~~~G~D~Iiv 244 (412)
T 1ea0_A 217 VTVKLVSRSGIGTIAAGVAKANADIILI 244 (412)
T ss_dssp EEEEEECCTTHHHHHHHHHHTTCSEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHCCCCEEEE
T ss_conf 7999913667799997766367999998
No 70
>>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, GMP reductase domain, structural genomics; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} (A:38-393)
Probab=41.17 E-value=25 Score=16.04 Aligned_cols=23 Identities=17% Similarity=-0.015 Sum_probs=11.9
Q ss_pred CCCHHHHHHHHHCCCCEEEECHH
Q ss_conf 78999999998379989993426
Q gi|254780659|r 46 GITEKIFCEMMETGIDVITTGNH 68 (274)
Q Consensus 46 Git~~~~~~l~~~GvDviT~GNH 68 (274)
..+.+.+..+.++|+|.|+.+||
T Consensus 182 ~~~~~~a~~~~~aGaD~I~v~g~ 204 (356)
T 2qr6_A 182 VNDYTTALHXXRTGAVGIIVGGG 204 (356)
T ss_dssp CCSHHHHHHHHTTTCSEEEESCC
T ss_pred CCCHHHHHHHHHCCCCEEEECCC
T ss_conf 26889988876155515677265
No 71
>>1a53_A IGPS, indole-3-glycerolphosphate synthase; thermostable, TIM-barrel; HET: IGP; 2.00A {Sulfolobus solfataricus} (A:25-247)
Probab=40.59 E-value=26 Score=15.99 Aligned_cols=68 Identities=12% Similarity=-0.010 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH-HHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf 989999999863413689988999625762289-999997608957799806976246545640367289840560
Q gi|254780659|r 128 DPFRTADKILATCPLKEQADVIVFDFHAETTSE-KQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM 202 (274)
Q Consensus 128 ~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE-K~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM 202 (274)
++..-.+...+. ..+.+.++...-...+ ++...+........+++.||+..... ...-|.-|+.=-++
T Consensus 89 ~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~a~~--a~~~g~d~i~~~~~ 157 (223)
T 1a53_A 89 VKESQIDDAYNL-----GADTVLLIVKILTERELESLLEYARSYGMEPLIEINDENDLDI--ALRIGARFIGINSR 157 (223)
T ss_dssp CSHHHHHHHHHH-----TCSEEEEEGGGSCHHHHHHHHHHHHTTTCCCEEEECSHHHHHH--HHHTTCSEEEEESB
T ss_pred CCHHHHHHHHHC-----CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH--HHHCCCCEEEEECC
T ss_conf 676799999861-----5455567686300788899999999986467772589999999--98168570545246
No 72
>>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} (A:)
Probab=39.95 E-value=7.6 Score=19.42 Aligned_cols=137 Identities=7% Similarity=-0.118 Sum_probs=60.6
Q ss_pred CCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCCCCC---------CCCEEEEECCCCCEEEEEEEE
Q ss_conf 89999999983799899934265302220475421893897500798887---------540799984899289999960
Q gi|254780659|r 47 ITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTP---------GNGSGLYCAKNGSNVLVANIM 117 (274)
Q Consensus 47 it~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~P---------G~G~~i~~~~~g~ki~Vinl~ 117 (274)
-.-+.++.+.+.|+|+|-..-..++..+.+..+.+...+..-....-..| |.-...+......-.......
T Consensus 29 ~~~~~~~~~~~~G~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gad~i~~~~~~~~~~~~~~~~ 108 (214)
T 1wbh_A 29 HAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEG 108 (214)
T ss_dssp GHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESSCCHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHC
T ss_conf 99999999998799889994798679999999999779862455744548999999982778777798989999999855
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH-HHHHHHHHHCCCEEEEEECCCCCCCCHHHHC
Q ss_conf 000588332598999999986341368998899962576228-9999997608957799806976246545640
Q gi|254780659|r 118 GRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTS-EKQCFAHFVDSRASLVVGTHTHIPTADAQIL 190 (274)
Q Consensus 118 Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTS-EK~A~g~~lDGrVsaVvGTHTHV~TaD~rIL 190 (274)
|...+ +.+.+|-...+. ++ ..++++.+.-..-+++ ......+..-.++..+..-.-.-.++..-+-
T Consensus 109 g~~~~-~~~~t~~e~~~a-~~-----~g~d~i~~~~~~~~~~~~~~~~~~~~~~~~pI~a~GGi~~~~~~~~~~ 175 (214)
T 1wbh_A 109 TIPLI-PGISTVSELMLG-MD-----YGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLA 175 (214)
T ss_dssp SSCEE-EEESSHHHHHHH-HH-----TTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHT
T ss_pred CCCCC-CCCCCHHHHHHH-HH-----CCCCEEEEEECHHHCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH
T ss_conf 99865-881867999999-98-----799979974024208798999871626578466457988888999996
No 73
>>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} (A:)
Probab=39.78 E-value=8.8 Score=19.04 Aligned_cols=58 Identities=10% Similarity=-0.032 Sum_probs=35.3
Q ss_pred HHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCE
Q ss_conf 898886099899991700478867899999999837998999342653022204754218938
Q gi|254780659|r 23 PRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKF 85 (274)
Q Consensus 23 p~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~i 85 (274)
.+..++.++-.++.+.... -..+.++++.++|+|++-.--...+..+.+..+.+.-.+
T Consensus 7 ~~~l~~~~l~~~~~~~~~~-----~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~~ 64 (217)
T 3lab_A 7 TWLANTKPLIPVIVIDDLV-----HAIPXAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPE 64 (217)
T ss_dssp HHHTTSCSEEEEECCSCGG-----GHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTT
T ss_pred HHHHHCCCEEEEEECCCHH-----HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC
T ss_conf 9997379889999789999-----999999999987998899968990499999999986899
No 74
>>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8} (A:131-273)
Probab=39.70 E-value=24 Score=16.23 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=9.2
Q ss_pred CCCHHHHHHHHHCCCCEEEEC
Q ss_conf 789999999983799899934
Q gi|254780659|r 46 GITEKIFCEMMETGIDVITTG 66 (274)
Q Consensus 46 Git~~~~~~l~~~GvDviT~G 66 (274)
|||+....++.++|+|.+-+|
T Consensus 118 GI~~~n~~~~~~~Ga~gv~vg 138 (143)
T 1x1o_A 118 NMTLERAKAAAEAGVDYVSVG 138 (143)
T ss_dssp SCCHHHHHHHHHHTCSEEECT
T ss_pred CCCHHHHHHHHHCCCCEEECC
T ss_conf 999999999987699999848
No 75
>>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, structural genomics, PSI; 2.00A {Aquifex aeolicus VF5} (A:)
Probab=38.46 E-value=25 Score=16.14 Aligned_cols=56 Identities=11% Similarity=0.026 Sum_probs=39.3
Q ss_pred EEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCC-CEEEECC
Q ss_conf 999917004788678999999998379989993426530222047542189-3897500
Q gi|254780659|r 33 FVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHC-KFLRPAN 90 (274)
Q Consensus 33 fvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~-~ilRP~N 90 (274)
.+++-| +++|.+|...+++.|.+.|..|+-.+...-..++....+.+.. ....+.-
T Consensus 23 ~vlITG--as~G~~IG~aia~~l~~~Ga~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~ 79 (285)
T 2p91_A 23 RALITG--VANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCD 79 (285)
T ss_dssp EEEECC--CSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECC
T ss_pred EEEEEC--CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEECCC
T ss_conf 799989--999757999999999985998999838768899999998503440442045
No 76
>>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A* (A:1-163)
Probab=38.25 E-value=12 Score=18.20 Aligned_cols=10 Identities=20% Similarity=0.368 Sum_probs=3.2
Q ss_pred HHHHHHHHHH
Q ss_conf 8999999986
Q gi|254780659|r 129 PFRTADKILA 138 (274)
Q Consensus 129 PF~~~d~~l~ 138 (274)
|...+.++++
T Consensus 112 ~~~~l~~l~~ 121 (163)
T 2wq7_A 112 PAEVFPRIFK 121 (163)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 77
>>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} (A:1-146)
Probab=38.04 E-value=13 Score=17.94 Aligned_cols=50 Identities=8% Similarity=0.214 Sum_probs=26.3
Q ss_pred HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHH
Q ss_conf 98089888609989999170047886789999999983799899934265
Q gi|254780659|r 20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHV 69 (274)
Q Consensus 20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~ 69 (274)
+.+++|.++++++-|+.|-+-.....-.-.++.+.|.+.|+.+.+-=+|+
T Consensus 90 ~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~i~~~l~~~gi~~~~~~~~~ 139 (146)
T 1np7_A 90 QVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTILGIEAKGYWGST 139 (146)
T ss_dssp HHHHHHHHHTTEEEEEEECCCSHHHHHHHHHHHHHHHHHTCEEEEECCSS
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999859968999366464014467999998874173201233212
No 78
>>3lls_A 3-ketoacyl-(acyl-carrier-protein) reductase; niaid, emerald biostructures, UW, SBRI, oxidoreductase, structural genomics; 2.40A {Mycobacterium tuberculosis} (A:227-422)
Probab=37.85 E-value=18 Score=16.96 Aligned_cols=97 Identities=18% Similarity=0.031 Sum_probs=67.1
Q ss_pred CCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCEE-EEECCCCCEEEEEEEEHHHC
Q ss_conf 88678999999998379989993426530222047542189389750079888754079-99848992899999600005
Q gi|254780659|r 43 GGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGSG-LYCAKNGSNVLVANIMGRVF 121 (274)
Q Consensus 43 ~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG~G~~-i~~~~~g~ki~Vinl~Gr~f 121 (274)
+..||...++++|.+.|..|+..+...-+-++....+.+......-........-.-.. +.....+....++|.-+-..
T Consensus 16 as~GIG~aia~~l~~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~in~a~~~~ 95 (196)
T 3lls_A 16 AARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITR 95 (196)
T ss_dssp CSSTHHHHHHHHHHHTTCEEEEEECGGGTHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHHTTCEEEEEECCCCCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 88789999999999879989999696589999999987397599960798999999999999971898629998995689
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 883325989999999863
Q gi|254780659|r 122 MNPLLDDPFRTADKILAT 139 (274)
Q Consensus 122 M~~~~d~PF~~~d~~l~~ 139 (274)
..+..+.+....+.+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~v 113 (196)
T 3lls_A 96 DKLLANMDDARWDAVLAV 113 (196)
T ss_dssp CCCGGGCCHHHHHHHHHH
T ss_pred CCCHHHCCHHHHHHHHHH
T ss_conf 874322678886556652
No 79
>>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline binding protein; PCE, hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} (A:149-283)
Probab=37.60 E-value=29 Score=15.69 Aligned_cols=72 Identities=10% Similarity=0.005 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHHHCCCCCCCCEEEE-ECCCCCHHHHHHHHHHHCCCEEEEE-ECC--CCCCCC--HHHHCCCC-EEEEEC
Q ss_conf 5989999999863413689988999-6257622899999976089577998-069--762465--45640367-289840
Q gi|254780659|r 127 DDPFRTADKILATCPLKEQADVIVF-DFHAETTSEKQCFAHFVDSRASLVV-GTH--THIPTA--DAQILDGG-TGYITD 199 (274)
Q Consensus 127 d~PF~~~d~~l~~~~~~~~~~~i~V-DfHaEaTSEK~A~g~~lDGrVsaVv-GTH--THV~Ta--D~rILp~G-TayiTD 199 (274)
|--.....+++++.. ...++...| .-|+-.+|--..|--.++-++..+= |.. ..-|+. =+++...| .-|.||
T Consensus 55 D~~~~~~~~l~~~~~-~~~~dvlkia~HHGs~~s~s~~~l~~~~p~~~iiS~g~~~~~~hP~~~~l~~l~~~g~~v~~T~ 133 (135)
T 2bib_A 55 DLDNVHGAEDKYGPL-IGKVDLMKFNHHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERINAA 133 (135)
T ss_dssp TCCSTTSHHHHHHHH-HCCCSEEECTTTTBCSSSSCHHHHHHHCCSEEEESBSSCSBSSSBCHHHHHHHHTTTCEEEECB
T ss_pred CCCCHHHHHHHHCCC-CCCCCEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEC
T ss_conf 899067999854687-7646799989848988677988997306408998058777788988899999997798799845
No 80
>>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, quinolinic acid; 2.40A {Mycobacterium tuberculosis H37RV} (A:130-274)
Probab=37.48 E-value=16 Score=17.26 Aligned_cols=19 Identities=21% Similarity=0.394 Sum_probs=6.7
Q ss_pred CCHHHHHHHHHCCCCEEEE
Q ss_conf 8999999998379989993
Q gi|254780659|r 47 ITEKIFCEMMETGIDVITT 65 (274)
Q Consensus 47 it~~~~~~l~~~GvDviT~ 65 (274)
|+++...+++++|+|.+-.
T Consensus 121 I~~~ni~~~~~aGa~~ivv 139 (145)
T 1qpo_A 121 LSLQTAATYAETGVDYLAV 139 (145)
T ss_dssp CCTTTHHHHHHTTCSEEEC
T ss_pred CCHHHHHHHHHCCCCEEEC
T ss_conf 9999999998659999984
No 81
>>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} PDB: 3exs_A* 3ext_A (A:)
Probab=36.81 E-value=14 Score=17.70 Aligned_cols=86 Identities=17% Similarity=-0.034 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHH------HCCCEEEEEECCCCCCCCHHHHCCCCEEEEECC
Q ss_conf 59899999998634136899889996257622899999976------089577998069762465456403672898405
Q gi|254780659|r 127 DDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHF------VDSRASLVVGTHTHIPTADAQILDGGTGYITDL 200 (274)
Q Consensus 127 d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~------lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDv 200 (274)
+.+-..++...+. .+|. +-.|+++..+-...+.. -.|....+.+.-+|.......+...+-.|+. +
T Consensus 69 ~~~~~~~~~~~~~-----gad~--~~vh~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 140 (221)
T 3exr_A 69 DAGGTVAKNNAVR-----GADW--MTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAI-Y 140 (221)
T ss_dssp SCHHHHHHHHHTT-----TCSE--EEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEE-E
T ss_pred CCCHHHHHHHHHC-----CCCE--EEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHEE-E
T ss_conf 2834788877632-----5779--997223441567999999876521462678860245358899998731301212-1
Q ss_pred CCCCCHHHCCCCCHHHHHHH
Q ss_conf 60137121035474678988
Q gi|254780659|r 201 GMCGDYNSSIGLDKEEPINR 220 (274)
Q Consensus 201 GMtG~~~SVIG~~~~~~i~r 220 (274)
+++.+-.+.-+......+.+
T Consensus 141 ~~~~~~g~~~~~~~~~~~~~ 160 (221)
T 3exr_A 141 HQSRDALLAGETWGEKDLNK 160 (221)
T ss_dssp ECCHHHHHHTCCCCHHHHHH
T ss_pred EECCCCCCCCCCCCHHHHHH
T ss_conf 32223566667779899999
No 82
>>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} (A:)
Probab=35.92 E-value=28 Score=15.75 Aligned_cols=43 Identities=14% Similarity=-0.066 Sum_probs=34.0
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCC
Q ss_conf 4788678999999998379989993426530222047542189
Q gi|254780659|r 41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHC 83 (274)
Q Consensus 41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~ 83 (274)
++++.||...++.+|.+.|..|+-.+-+.=..++....+.+..
T Consensus 22 a~~~~GIG~aiA~~la~~Ga~Vil~~r~~~~~~~~~~~~~~~~ 64 (271)
T 3ek2_A 22 LLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG 64 (271)
T ss_dssp CCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf 9886189999999999869999999588688999999987449
No 83
>>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A (A:1-91)
Probab=35.83 E-value=31 Score=15.51 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=28.7
Q ss_pred HHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf 8886099899991700478867899999999837998999342
Q gi|254780659|r 25 LIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 25 l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GN 67 (274)
-....+||+||+.. .+...+.+++|.+.|+.++.+-+
T Consensus 54 ~i~~l~PDlii~~~------~~~~~~~~~~L~~~gi~v~~~~~ 90 (91)
T 2r7a_A 54 GILSLRPDSVITWQ------DAGPQIVLDQLRAQKVNVVTLPR 90 (91)
T ss_dssp HHHTTCCSEEEEET------TCSCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHCCCCEEEEEC------CCCCHHHHHHHHHCCCEEEEECC
T ss_conf 99840998078533------65402677898852835998425
No 84
>>3cij_A UPF0100 protein AF_0094; archaeal periplasmic binding protein, unknown function, metal binding protein, transport protein; 1.07A {Archaeoglobus fulgidus} PDB: 2ons_A 2onk_E 2onr_A (A:1-85,A:254-295)
Probab=35.82 E-value=31 Score=15.51 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHC-CCCEEEECCEECCCCCCCCHHHHHHHHHCC--CCEEEECHHHHCCCC-HHHHHHHCCCEEE-
Q ss_conf 88999999808988860-998999917004788678999999998379--989993426530222-0475421893897-
Q gi|254780659|r 13 TGRSIVYEMLPRLIRDF-QLDFVIANGENSAGGFGITEKIFCEMMETG--IDVITTGNHVWDKRE-ALVFSQRHCKFLR- 87 (274)
Q Consensus 13 ~Gr~~v~~~Lp~l~~~~-~~DfvIaNgENaa~G~Git~~~~~~l~~~G--vDviT~GNH~wd~ke-i~~~i~~~~~ilR- 87 (274)
+=+..+++..+.+.++| +++..+.. |=+.+.++++.+.| .||+-++|..|-++- --.+++..-++.+
T Consensus 14 sl~~~~~ei~~~F~~~~tgi~V~~~~--------g~Sg~l~~qi~~~G~~~DV~isa~~~~~~~l~~~glv~~~~~~a~n 85 (127)
T 3cij_A 14 SLTEPMKAFKRAFEEKHPNVEVQTEA--------AGSAATIRKVTELGRKADVIATADYTLIQKMMYPEFANWTIMFAKN 85 (127)
T ss_dssp GGHHHHHHHHHHHHHHCTTCEEEEEE--------ECHHHHHHHHHTSCCCCSEEEESSTHHHHHHHTTTTCCCCEEEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEE--------CCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCHHHCC
T ss_conf 80999999999999988694899996--------8809999999967999988998877899999967996655201025
Q ss_pred ECCCCC
Q ss_conf 500798
Q gi|254780659|r 88 PANYPP 93 (274)
Q Consensus 88 P~N~p~ 93 (274)
|.+||-
T Consensus 86 pi~~~~ 91 (127)
T 3cij_A 86 PIVYGI 91 (127)
T ss_dssp CCEEEE
T ss_pred EEEEEE
T ss_conf 367799
No 85
>>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} (A:1-116)
Probab=35.40 E-value=31 Score=15.47 Aligned_cols=74 Identities=12% Similarity=0.196 Sum_probs=42.5
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf 92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ 80 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~ 80 (274)
+||+++| .|++|+.++.+.|.+ .+.++.+..... ....+++.+.|+.+++..+- +.++
T Consensus 19 ~~v~viG--lG~sG~salA~~L~~----~G~~V~~~D~~~--------~~~~~~~~~~g~~~~~g~~~--------~~l~ 76 (116)
T 1p3d_A 19 QQIHFIG--IGGAGXSGIAEILLN----EGYQISGSDIAD--------GVVTQRLAQAGAKIYIGHAE--------EHIE 76 (116)
T ss_dssp CEEEEET--TTSTTHHHHHHHHHH----HTCEEEEEESCC--------SHHHHHHHHTTCEEEESCCG--------GGGT
T ss_pred CEEEEEE--ECHHHHHHHHHHHHH----CCCEEEEEECCC--------CHHHHHHHHCCCEEECCCCH--------HHCC
T ss_conf 7899999--669999999999997----889399992899--------97999999787999879998--------9969
Q ss_pred HCCCEEEECCCCCCCC
Q ss_conf 1893897500798887
Q gi|254780659|r 81 RHCKFLRPANYPPNTP 96 (274)
Q Consensus 81 ~~~~ilRP~N~p~~~P 96 (274)
+.+-++..--+|+..|
T Consensus 77 ~~d~vV~SPgi~~~~p 92 (116)
T 1p3d_A 77 GASVVVVSSAIKDDNP 92 (116)
T ss_dssp TCSEEEECTTSCTTCH
T ss_pred CCCEEEECCCCCCCCH
T ss_conf 9999998997499899
No 86
>>2ck3_G ATP synthase gamma chain; ATP phosphorylase, ATP phosphorylase (H+ transporting), F1FO ATP synthase, F1-ATPase, hydrolase, ATP synthesis; HET: ANP ADP; 1.9A {Bos taurus} (G:)
Probab=34.46 E-value=12 Score=18.15 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=24.1
Q ss_pred HHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHHH
Q ss_conf 60895779980697624654564036728984056013712103547467898
Q gi|254780659|r 167 FVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPIN 219 (274)
Q Consensus 167 ~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~ 219 (274)
.+.-++..++..|-+.+..+..-. .=-.+-+|-|+||+|+|-+=-.-...++
T Consensus 43 ~y~~~~~~~~~~~~~~~~~~~~~~-l~IvitSd~GlcG~~Ns~i~k~~~~~i~ 94 (272)
T 2ck3_G 43 VYGVGSLALYEKADIKTPEDKKKH-LIIGVSSDRGLCGAIHSSVAKQMKSEAA 94 (272)
T ss_dssp HHHCC--------------------CCCCBCCSCCCSSSSHHHHC--------
T ss_pred CHHHHHHHHHCCCCCHHCCCCCCC-EEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 579886886515420101345651-1699866898766540049999999876
No 87
>>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus pcc 6301} (A:1-196)
Probab=34.39 E-value=27 Score=15.91 Aligned_cols=54 Identities=15% Similarity=0.245 Sum_probs=41.0
Q ss_pred HHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCC
Q ss_conf 998089888609989999170047886789999999983799899934265302
Q gi|254780659|r 19 YEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDK 72 (274)
Q Consensus 19 ~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~ 72 (274)
.+.|+.|.++++++.|.+|-|=....+-.-..+.+.|.+.|+.+.+.=+|++-.
T Consensus 81 ~~~l~~l~~~~~~~~v~~~~~~~~~~~~~~~~i~~~l~~~~i~~~~~~~~~l~~ 134 (196)
T 1owl_A 81 QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLWDQLLHS 134 (196)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEECCSSSSC
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEC
T ss_conf 999999999849988999601464045666554333311583001035652026
No 88
>>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} (A:241-452)
Probab=34.32 E-value=25 Score=16.13 Aligned_cols=102 Identities=9% Similarity=-0.070 Sum_probs=45.7
Q ss_pred CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCC
Q ss_conf 99999999837998999342653022204754218938975007988875407999848992899999600005883325
Q gi|254780659|r 48 TEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLD 127 (274)
Q Consensus 48 t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d 127 (274)
+.+.++++.++|+|.|-..-..-+.+++....... +........+. ++ .+
T Consensus 24 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~-------------------i~~~~~~~~v~-------v~----v~ 73 (212)
T 1pii_A 24 RGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQE-------------------VMAAAPLQYVG-------VF----RN 73 (212)
T ss_dssp SHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHH-------------------HHHHCCCEEEE-------EE----SS
T ss_pred CHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH-------------------HHHHCCCCEEE-------EE----EC
T ss_conf 74899999866998897746899988679999999-------------------99747987479-------99----37
Q ss_pred CHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHH-HHHHCCCE--EEEEECCCCCCCC
Q ss_conf 9899999998634136899889996257622899999-97608957--7998069762465
Q gi|254780659|r 128 DPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCF-AHFVDSRA--SLVVGTHTHIPTA 185 (274)
Q Consensus 128 ~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~-g~~lDGrV--saVvGTHTHV~Ta 185 (274)
.+...+.+++.+. ..| .|-+|++.+-+-... ...+.... ...+.+-|.+..+
T Consensus 74 ~~~~~~~~~~~~~----g~d--~v~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a 128 (212)
T 1pii_A 74 HDIADVVDKAKVL----SLA--AVQLHGNEEQLYIDTLREALPAHVAIWKALSVGETLPAR 128 (212)
T ss_dssp CCHHHHHHHHHHH----TCS--EEEECSCCCHHHHHHHHHHSCTTSEEEEEEECSSSCCCC
T ss_pred CCHHHHHHHHHHC----CCC--EEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
T ss_conf 9999999999855----998--689889998899999976467646999841644531256
No 89
>>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} (A:)
Probab=34.27 E-value=32 Score=15.35 Aligned_cols=15 Identities=13% Similarity=0.138 Sum_probs=5.9
Q ss_pred HHHHHHCCCCEEEEC
Q ss_conf 999983799899934
Q gi|254780659|r 52 FCEMMETGIDVITTG 66 (274)
Q Consensus 52 ~~~l~~~GvDviT~G 66 (274)
.+.|.++|+|.++.+
T Consensus 78 ~~~l~~~Gad~v~l~ 92 (226)
T 1w0m_A 78 LENIKEAGGSGVILN 92 (226)
T ss_dssp HHHHHHHTCCEEEEC
T ss_pred HHHHHCCCCCEEEEE
T ss_conf 888510146469950
No 90
>>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier- protein) reductase, NAD; HET: NAD; 1.80A {Anaplasma phagocytophilum HZ} PDB: 3k2e_A* (A:)
Probab=34.09 E-value=25 Score=16.13 Aligned_cols=53 Identities=15% Similarity=0.043 Sum_probs=38.0
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH-CCCEEEECCCCC
Q ss_conf 47886789999999983799899934265302220475421-893897500798
Q gi|254780659|r 41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQR-HCKFLRPANYPP 93 (274)
Q Consensus 41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~-~~~ilRP~N~p~ 93 (274)
+++|.||...++.+|.+.|.+|+-.+...=...+....+.. ....--+++...
T Consensus 38 assG~~IG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~ 91 (296)
T 3k31_A 38 VANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD 91 (296)
T ss_dssp CCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 999866999999999986999999958878999999999744962565347799
No 91
>>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A* (A:)
Probab=34.06 E-value=7.4 Score=19.50 Aligned_cols=85 Identities=11% Similarity=-0.072 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH----HHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf 59899999998634136899889996257622899----99997608957799806976246545640367289840560
Q gi|254780659|r 127 DDPFRTADKILATCPLKEQADVIVFDFHAETTSEK----QCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM 202 (274)
Q Consensus 127 d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK----~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM 202 (274)
+.+-..++...+- .+|.+. +|+++.++- ....-....++..+..+.+....+...-.. -+...=++|
T Consensus 70 ~~~~~~~~~~~~~-----gad~i~--vh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 140 (218)
T 3jr2_A 70 DGGAILSRXAFEA-----GADWIT--VSAAAHIATIAACKKVADELNGEIQIEIYGNWTXQDAKAWVDL--GITQAIYHR 140 (218)
T ss_dssp SCHHHHHHHHHHH-----TCSEEE--EETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHT--TCCEEEEEC
T ss_pred CCCCCHHHHHHCC-----CCCEEE--EEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH--HCCEEEEEE
T ss_conf 4872024454146-----771899--7231035679999998653266328981489999999999862--115189888
Q ss_pred CCCHHHCCCCCHHHHHHH
Q ss_conf 137121035474678988
Q gi|254780659|r 203 CGDYNSSIGLDKEEPINR 220 (274)
Q Consensus 203 tG~~~SVIG~~~~~~i~r 220 (274)
++.-.+-.+..+...+.+
T Consensus 141 ~~~tg~~~~~~~~~~~~~ 158 (218)
T 3jr2_A 141 SRDAELAGIGWTTDDLDK 158 (218)
T ss_dssp CHHHHHHTCCSCHHHHHH
T ss_pred EECCCCCCCCCCHHHHHH
T ss_conf 303686652368999999
No 92
>>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii RH} PDB: 2o50_A (A:)
Probab=33.91 E-value=30 Score=15.59 Aligned_cols=42 Identities=12% Similarity=-0.099 Sum_probs=34.9
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHC
Q ss_conf 478867899999999837998999342653022204754218
Q gi|254780659|r 41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRH 82 (274)
Q Consensus 41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~ 82 (274)
+++..||...++++|-+.|.+|+-.+....+..+....+.+.
T Consensus 17 aagssGIG~aiA~~la~~Ga~Vi~~~~~~~~~~~~~~~~~~~ 58 (315)
T 2o2s_A 17 VADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGR 58 (315)
T ss_dssp CSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 999987999999999987999999837603324566666555
No 93
>>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} (A:)
Probab=33.78 E-value=3.9 Score=21.33 Aligned_cols=97 Identities=14% Similarity=0.064 Sum_probs=66.1
Q ss_pred CCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCE-EEEECCCCCEEEEEEEEHHHC
Q ss_conf 8867899999999837998999342653022204754218938975007988875407-999848992899999600005
Q gi|254780659|r 43 GGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGS-GLYCAKNGSNVLVANIMGRVF 121 (274)
Q Consensus 43 ~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG~G~-~i~~~~~g~ki~Vinl~Gr~f 121 (274)
++.||...++++|.+.|..|+-.+...-.-.+....+....-...+++.....-=+-. .-.....|.-=.++|-.|-..
T Consensus 15 as~GIG~aia~~la~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lVnnag~~~ 94 (249)
T 2ew8_A 15 GANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP 94 (249)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 98789999999999879999999798318999999974996799981079999999999999997399979998998899
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 883325989999999863
Q gi|254780659|r 122 MNPLLDDPFRTADKILAT 139 (274)
Q Consensus 122 M~~~~d~PF~~~d~~l~~ 139 (274)
+.+..|.+....++.++-
T Consensus 95 ~~~~~~~~~~~~~~~~~v 112 (249)
T 2ew8_A 95 LIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp CCCGGGCCHHHHHHHHHH
T ss_pred CCCHHHCCHHHHHHHHHH
T ss_conf 989266999999999999
No 94
>>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} (A:)
Probab=32.26 E-value=35 Score=15.14 Aligned_cols=137 Identities=12% Similarity=-0.016 Sum_probs=55.5
Q ss_pred EECCCCCCCCHHHH---HHHHHCCCCEEEE-------CHHHHCCCCHHHHHHHCCCEEEE--CCCCC--CCCCCCEEEEE
Q ss_conf 00478867899999---9998379989993-------42653022204754218938975--00798--88754079998
Q gi|254780659|r 39 ENSAGGFGITEKIF---CEMMETGIDVITT-------GNHVWDKREALVFSQRHCKFLRP--ANYPP--NTPGNGSGLYC 104 (274)
Q Consensus 39 ENaa~G~Git~~~~---~~l~~~GvDviT~-------GNH~wd~kei~~~i~~~~~ilRP--~N~p~--~~PG~G~~i~~ 104 (274)
-+.+.||-+--.++ +.|.+.|+.-|-- ||=+ -+.+...|+++-= .+++. ..||.|..-..
T Consensus 135 ~~~a~GFC~~Nnvaiaa~~l~~~~~~rv~iiD~DvHhGnGt------q~if~~d~~Vl~~S~H~~~~~~f~p~tg~~~~~ 208 (375)
T 1c3p_A 135 KSRANGFCYINNPAVGIEYLRKKGFKRILYIDLDAHHCDGV------QEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEI 208 (375)
T ss_dssp TTBCBTTBSSCHHHHHHHHHHHTTCCCEEEEECSSSCCHHH------HHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC------EEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCC
T ss_conf 02430342156299999999874267448874355577761------567650576542011157777788888772336
Q ss_pred CCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC---------------HHHHHHHHHHHC
Q ss_conf 48992899999600005883325989999999863413689988999625762---------------289999997608
Q gi|254780659|r 105 AKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAET---------------TSEKQCFAHFVD 169 (274)
Q Consensus 105 ~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEa---------------TSEK~A~g~~lD 169 (274)
-.+.-+--.+|+-=.-.+.. +.=...+++++..+...-+.++|||..=..+ =.+-..+-.-+.
T Consensus 209 G~g~g~g~~~Nipl~~g~~d--~~y~~~~~~~~~p~~~~f~Pd~I~~~aG~D~~~~Dplg~~~ls~~~~~~~~~~i~~~~ 286 (375)
T 1c3p_A 209 GEGKGKGYNLNIPLPKGLND--NEFLFALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVF 286 (375)
T ss_dssp CCGGGTTSEEEEEECTTCCH--HHHHHHHHHHHHHHHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEECCCCCCCCCC--HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 78766651240358864563--8999999986799998668878999677378887867898688889999999999858
Q ss_pred CCEEEEEECCCCCC
Q ss_conf 95779980697624
Q gi|254780659|r 170 SRASLVVGTHTHIP 183 (274)
Q Consensus 170 GrVsaVvGTHTHV~ 183 (274)
+|+-+|+|-.-+..
T Consensus 287 ~~~v~vleGGY~~~ 300 (375)
T 1c3p_A 287 GEGVYLGGGGYHPY 300 (375)
T ss_dssp CSCEEECCCCCCHH
T ss_pred CCEEEEECCCCCHH
T ss_conf 99699975878367
No 95
>>2r79_A Periplasmic binding protein; heme transport, transport protein; HET: HEM; 2.40A {Pseudomonas aeruginosa} (A:1-91)
Probab=32.07 E-value=35 Score=15.12 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=27.1
Q ss_pred HHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEE
Q ss_conf 988860998999917004788678999999998379989993
Q gi|254780659|r 24 RLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITT 65 (274)
Q Consensus 24 ~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~ 65 (274)
+-....+||+||++. .+...+.+++|.+.|+.++.+
T Consensus 53 E~i~~l~PDlvi~~~------~~~~~~~~~~l~~~gi~v~v~ 88 (91)
T 2r79_A 53 EGVLALRPDILIGTE------EMGPPPVLKQLEGAGVRVETL 88 (91)
T ss_dssp HHHHTTCCSEEEECT------TCCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHCCCCEEEEEC------CCCHHHHHHHHHHCCCCCCCC
T ss_conf 999845998699735------642055777765316732135
No 96
>>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A* (A:134-281)
Probab=31.61 E-value=15 Score=17.51 Aligned_cols=19 Identities=37% Similarity=0.454 Sum_probs=8.7
Q ss_pred CHHHHHHHHHCCCCEEEEC
Q ss_conf 9999999983799899934
Q gi|254780659|r 48 TEKIFCEMMETGIDVITTG 66 (274)
Q Consensus 48 t~~~~~~l~~~GvDviT~G 66 (274)
|+.-+.+.+++|+|++..|
T Consensus 75 s~~e~~~a~~~gad~i~~~ 93 (148)
T 3c2e_A 75 SEDEATEAIEAGADVIMLD 93 (148)
T ss_dssp SSHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHHHCCCEEECC
T ss_conf 5889999987158552136
No 97
>>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} (A:)
Probab=31.53 E-value=35 Score=15.15 Aligned_cols=19 Identities=16% Similarity=-0.120 Sum_probs=7.2
Q ss_pred CCCCCCHHHCCCCCHHHHH
Q ss_conf 5601371210354746789
Q gi|254780659|r 200 LGMCGDYNSSIGLDKEEPI 218 (274)
Q Consensus 200 vGMtG~~~SVIG~~~~~~i 218 (274)
++|+.+-.+.-+......+
T Consensus 135 ~~~~~~~g~~~~~~~~~~~ 153 (216)
T 1q6o_A 135 YHRSRDAQAAGVAWGEADI 153 (216)
T ss_dssp EECCHHHHHTTCCCCHHHH
T ss_pred EEECCCCCCCCEECCHHHH
T ss_conf 5411457867876888889
No 98
>>3fem_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, synthase, biosynthetic protein, transferase; 3.02A {Saccharomyces cerevisiae} (A:)
Probab=30.99 E-value=22 Score=16.42 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHCCCEEEEEECC
Q ss_conf 2899999976089577998069
Q gi|254780659|r 158 TSEKQCFAHFVDSRASLVVGTH 179 (274)
Q Consensus 158 TSEK~A~g~~lDGrVsaVvGTH 179 (274)
|.|..+-+ .--|--+.++||-
T Consensus 217 tp~da~~a-~~lGA~aV~vgta 237 (297)
T 3fem_A 217 TPADAALL-MQLGCDGVFVGSG 237 (297)
T ss_dssp SHHHHHHH-HHTTCSCEECCSS
T ss_pred CHHHHHHH-HHCCCCEEEECCC
T ss_conf 83779999-9728987986665
No 99
>>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta- barrel, lyase; 2.20A {Pseudomonas putida} (A:)
Probab=30.98 E-value=11 Score=18.46 Aligned_cols=56 Identities=9% Similarity=0.014 Sum_probs=29.6
Q ss_pred HHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf 8089888609989999170047886789999999983799899934265302220475421
Q gi|254780659|r 21 MLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQR 81 (274)
Q Consensus 21 ~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~ 81 (274)
.+.+.+++.++-.++...... --.+.++.+.+.|+|.|..--..-...+.+..+.+
T Consensus 18 ~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~G~d~i~i~~~~~~~~~~i~~~~~ 73 (225)
T 1mxs_A 18 RIDAICEKARILPVITIAREE-----DILPLADALAAGGIRTLEVTLRSQHGLKAIQVLRE 73 (225)
T ss_dssp HHHHHHHHHSEEEEECCSCGG-----GHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEEEECCCHH-----HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 999999869878999749999-----99999999998699889995898049999999997
No 100
>>2qe7_G ATP synthase subunit gamma; blockage of ATP hydrolysis, F1-ATPase, single particle analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP} (G:)
Probab=30.83 E-value=12 Score=18.04 Aligned_cols=27 Identities=7% Similarity=0.020 Sum_probs=15.2
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCHH
Q ss_conf 999997608957799806976246545
Q gi|254780659|r 161 KQCFAHFVDSRASLVVGTHTHIPTADA 187 (274)
Q Consensus 161 K~A~g~~lDGrVsaVvGTHTHV~TaD~ 187 (274)
...+-.|..|..+.|.--++|-..+..
T Consensus 154 ~~i~~~~~~~~~~~v~ivyn~~~~~~~ 180 (286)
T 2qe7_G 154 QSAIGMFADETFDKLTIFYNEFVSPIV 180 (286)
T ss_dssp HHHHHHHSSSSCSCCCCCCCCCSBTTB
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCC
T ss_conf 999987521678733788630334543
No 101
>>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei} (A:122-286)
Probab=30.27 E-value=25 Score=16.11 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=19.1
Q ss_pred HHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf 999999983799899934265302220475421
Q gi|254780659|r 49 EKIFCEMMETGIDVITTGNHVWDKREALVFSQR 81 (274)
Q Consensus 49 ~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~ 81 (274)
.+..+.+.+.|++++-.=.-..+-++....+-.
T Consensus 15 ~~~v~~a~~~g~~~~~~r~~~~~~~~~~~~~~~ 47 (165)
T 3gnn_A 15 RQYVDRIADTRARILDTRKTLPGLRLAQKYAVR 47 (165)
T ss_dssp HHHHHHTTTSSCCEECCSCCCTTCHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHH
T ss_conf 999998569986355252012006888755553
No 102
>>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} (A:)
Probab=29.98 E-value=38 Score=14.90 Aligned_cols=19 Identities=21% Similarity=0.146 Sum_probs=9.3
Q ss_pred HHHHHHHHHCCCCEEEECH
Q ss_conf 9999999837998999342
Q gi|254780659|r 49 EKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 49 ~~~~~~l~~~GvDviT~GN 67 (274)
.+.++.+.+.|+|.+..+-
T Consensus 20 ~e~~~~~~~~G~~~i~l~~ 38 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDV 38 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHCCCCEEEEEC
T ss_conf 9999999975999899967
No 103
>>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} (A:1-146,A:339-358)
Probab=29.82 E-value=20 Score=16.68 Aligned_cols=61 Identities=10% Similarity=0.111 Sum_probs=25.3
Q ss_pred HHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECH-----HHHCCCCHHHHHHHCCCEEEE
Q ss_conf 898886099899991700478867899999999837998999342-----653022204754218938975
Q gi|254780659|r 23 PRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGN-----HVWDKREALVFSQRHCKFLRP 88 (274)
Q Consensus 23 p~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GN-----H~wd~kei~~~i~~~~~ilRP 88 (274)
.++.+..++|+|+.-..+..+ ...+.+.+++|.+|+|+-. -..+-+++.+.-.+....++|
T Consensus 77 ~~ll~~~~~D~V~i~tp~~~h-----~~~~~~al~~GkhV~~~~eKP~a~~~~~~~~L~~~a~~~g~~~~~ 142 (166)
T 1ebf_A 77 AHLKTSPKPVILVDNTSSAYI-----AGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHE 142 (166)
T ss_dssp HHHTTCSSCEEEEECSCCHHH-----HTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEECG
T ss_pred HHHHCCCCCEEEEECCCCHHH-----HHHHHHHHHCCCEEEEECHHHCCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf 998439997199988998679-----999999997798688503054044788999999753565699996
No 104
>>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} (A:)
Probab=29.69 E-value=32 Score=15.42 Aligned_cols=41 Identities=15% Similarity=-0.006 Sum_probs=29.8
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf 47886789999999983799899934265302220475421
Q gi|254780659|r 41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQR 81 (274)
Q Consensus 41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~ 81 (274)
++++.||...++++|.+.|.+|+-.+--.=...+....+..
T Consensus 14 ass~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~ 54 (275)
T 2pd4_A 14 VANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE 54 (275)
T ss_dssp CCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC
T ss_conf 99972899999999998799999996888999999999851
No 105
>>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana} (A:1-142)
Probab=29.48 E-value=14 Score=17.67 Aligned_cols=10 Identities=20% Similarity=0.139 Sum_probs=3.3
Q ss_pred HHHHHHHHHH
Q ss_conf 8999999986
Q gi|254780659|r 129 PFRTADKILA 138 (274)
Q Consensus 129 PF~~~d~~l~ 138 (274)
|...+.++++
T Consensus 91 ~~~~l~~l~~ 100 (142)
T 3fy4_A 91 PGEVLVRCLQ 100 (142)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
T ss_conf 8999999999
No 106
>>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} (A:)
Probab=28.69 E-value=37 Score=15.02 Aligned_cols=86 Identities=15% Similarity=0.109 Sum_probs=49.5
Q ss_pred EEEEEEECC----CHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCC-CCCCHHHHHHHHHCCCCEEEE---CHHHHCCC
Q ss_conf 269997202----7688999999808988860998999917004788-678999999998379989993---42653022
Q gi|254780659|r 2 RLLFLGDIV----GKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGG-FGITEKIFCEMMETGIDVITT---GNHVWDKR 73 (274)
Q Consensus 2 kiLfiGDIv----G~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G-~Git~~~~~~l~~~GvDviT~---GNH~wd~k 73 (274)
||+|+||=. |.++.......+.+.-....++..+.|.--...+ ..+.....+.+...-.|++.. .|..+...
T Consensus 4 ~i~~iGDS~t~g~~~~~~~~~~~~~~~~l~~~~~~~~~~n~g~~G~~~~~~~~~~~~~~~~~~~d~vii~~G~ND~~~~~ 83 (185)
T 3hp4_A 4 TILILGDXLSAAYGLQQEEGWVKLLQDKYDAEQSDIVLINASISGETSGGALRRLDALLEQYEPTHVLIELGANDGLRGF 83 (185)
T ss_dssp EEEEEECTTTTTTTSCGGGSHHHHHHHHHHHTTCCEEEEECCCTTCCHHHHHHHHHHHHHHHCCSEEEEECCHHHHHTTC
T ss_pred EEEEECCHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 89997897770468885788699999999862998379843778765257664112443147998899715677623454
Q ss_pred CHHHHHHHCCCEEE
Q ss_conf 20475421893897
Q gi|254780659|r 74 EALVFSQRHCKFLR 87 (274)
Q Consensus 74 ei~~~i~~~~~ilR 87 (274)
....+.+....+++
T Consensus 84 ~~~~~~~~~~~li~ 97 (185)
T 3hp4_A 84 PVKKMQTNLTALVK 97 (185)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
T ss_conf 58999999999999
No 107
>>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} (A:)
Probab=27.96 E-value=27 Score=15.92 Aligned_cols=76 Identities=14% Similarity=0.116 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHH-CCCCEEEECHH---------------HHCC
Q ss_conf 0276889999998089888609989999170047886789999999983-79989993426---------------5302
Q gi|254780659|r 9 IVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMME-TGIDVITTGNH---------------VWDK 72 (274)
Q Consensus 9 IvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~-~GvDviT~GNH---------------~wd~ 72 (274)
|++.|++...++.+.-|+ +++++|...|-.. -++++....++++ .|+.+...-|. .|+.
T Consensus 7 iY~~~~C~~crka~~~L~-~~gi~~~~idi~~----~~~s~~eL~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~ 81 (120)
T 3fz4_A 7 FYEYPKCSTCRRAKAELD-DLAWDYDAIDIKK----NPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKDKLHQLSL 81 (120)
T ss_dssp EEECSSCHHHHHHHHHHH-HHTCCEEEEETTT----SCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTHHHHGGGCCH
T ss_pred EECCCCCHHHHHHHHHHH-HCCCCCEEEECCC----CCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCCCCCCCCCCH
T ss_conf 975899877999999999-8699848984023----69799999999998199999986606825666574103557999
Q ss_pred CCHHHHHHHCCCEE-EEC
Q ss_conf 22047542189389-750
Q gi|254780659|r 73 REALVFSQRHCKFL-RPA 89 (274)
Q Consensus 73 kei~~~i~~~~~il-RP~ 89 (274)
.|+++.+-++|.|+ ||.
T Consensus 82 ~e~l~~l~~~p~likRPi 99 (120)
T 3fz4_A 82 DEAANLLASDGXLIKRPL 99 (120)
T ss_dssp HHHHHHHHHCGGGBCSCE
T ss_pred HHHHHHHHHCHHHHCCCE
T ss_conf 999999985944304846
No 108
>>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} (A:87-155,A:193-274)
Probab=27.82 E-value=42 Score=14.66 Aligned_cols=58 Identities=21% Similarity=0.201 Sum_probs=25.9
Q ss_pred HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECH--HHHCCCCHHHHHHHCCCEEEE
Q ss_conf 980898886099899991700478867899999999837998999342--653022204754218938975
Q gi|254780659|r 20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGN--HVWDKREALVFSQRHCKFLRP 88 (274)
Q Consensus 20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GN--H~wd~kei~~~i~~~~~ilRP 88 (274)
+.+...++..++.|+..+.++..--. +...|+|.+.+ |.|...+...++.+-.++|||
T Consensus 62 ~~~~~a~~~~~v~~~~~d~~~~~~~~-----------~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkp 121 (151)
T 1af7_A 62 EVLEKARSANYVEFSSVNLLEKQYNV-----------PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP 121 (151)
T ss_dssp HHHHHHHHHTTEEEEECCTTCSSCCC-----------CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHHHCHCCCEEEEECCCCCCCCC-----------CCCCCEEEECHHHHHCCHHHHHHHHHHHHHHHCC
T ss_conf 99987743377575301124544466-----------8882189861126608999999999999998589
No 109
>>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA; 2.00A {Aquifex aeolicus VF5} (A:)
Probab=27.20 E-value=43 Score=14.59 Aligned_cols=47 Identities=19% Similarity=0.359 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHCCCCEE--EECCEECCCCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf 99980898886099899--991700478867899999999837998999342
Q gi|254780659|r 18 VYEMLPRLIRDFQLDFV--IANGENSAGGFGITEKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 18 v~~~Lp~l~~~~~~Dfv--IaNgENaa~G~Git~~~~~~l~~~GvDviT~GN 67 (274)
+.+.+-+++++-+.-++ |..|.. .+..+.+..+.+.+.|+|.|-.|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~i~~g~~---~~~~~~~~~~~l~~~g~d~i~ig~ 52 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLMVGYP---DYETSLKAFKEVLKNGTDILEIGF 52 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEETTSS---CHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCC---CHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999997599669999828379---878999999999976999999678
No 110
>>3bpw_A Orotidine 5'-phosphate decarboxylase; P. falciparum, orotidine 5'- monophosphate decarboxylase, XMP, lyase, pyrimidine biosynthesis; HET: XMP; 1.70A {Plasmodium falciparum} PDB: 2qaf_A* 3bar_A* 2q8z_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A (A:)
Probab=27.09 E-value=38 Score=14.93 Aligned_cols=11 Identities=18% Similarity=-0.064 Sum_probs=4.8
Q ss_pred HHHCCCCEEEE
Q ss_conf 98379989993
Q gi|254780659|r 55 MMETGIDVITT 65 (274)
Q Consensus 55 l~~~GvDviT~ 65 (274)
+..+|+|.+|.
T Consensus 173 ~~~~gaD~vtv 183 (342)
T 3bpw_A 173 FEYLKSDSCTV 183 (342)
T ss_dssp HTTSCCSEEEE
T ss_pred HHCCCCCEEEE
T ss_conf 64147878997
No 111
>>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, acetylation, arginase fold, HDAC8, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* (A:)
Probab=26.13 E-value=45 Score=14.46 Aligned_cols=69 Identities=7% Similarity=0.041 Sum_probs=29.0
Q ss_pred EEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC----CCCC--------HHHH---HHHHHHHCCCEEEEEE
Q ss_conf 99960000588332598999999986341368998899962----5762--------2899---9999760895779980
Q gi|254780659|r 113 VANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDF----HAET--------TSEK---QCFAHFVDSRASLVVG 177 (274)
Q Consensus 113 Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDf----HaEa--------TSEK---~A~g~~lDGrVsaVvG 177 (274)
.+|+--.-.|+. +.=...+++++..+-..-+.++|+|.. |..- +.-= ..+-.-+.||+-++.|
T Consensus 226 ~~Nipl~~g~~D--~~y~~~~~~~i~p~~~~f~PdlIivsaG~D~~~~Dplg~~~lt~~~~~~~~~~i~~~a~~~v~~le 303 (388)
T 3ew8_A 226 SVNVPIQDGIQD--EKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGG 303 (388)
T ss_dssp EEEEEECTTCCH--HHHHHHHHHHHHHHHHHHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 668889999886--999999999999999971989899989804778998878230899999999999855998799978
Q ss_pred CCCCCC
Q ss_conf 697624
Q gi|254780659|r 178 THTHIP 183 (274)
Q Consensus 178 THTHV~ 183 (274)
=--++.
T Consensus 304 GGY~~~ 309 (388)
T 3ew8_A 304 GGYNLA 309 (388)
T ss_dssp CCCSHH
T ss_pred CCCCHH
T ss_conf 778878
No 112
>>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} (A:)
Probab=26.05 E-value=45 Score=14.45 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf 9999808988860998999917004788678999999998379989993426
Q gi|254780659|r 17 IVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNH 68 (274)
Q Consensus 17 ~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH 68 (274)
.+++.|.+++++..+=+ +..-=+....++-..+..+.+.++|+|.+..+.-
T Consensus 3 ~~~~~~~~~~~~~~~~l-~~~i~~g~~~~~~~~~~~~~~~~~g~~~v~~~~~ 53 (268)
T 1qop_A 3 RYENLFAQLNDRREGAF-VPFVTLGDPGIEQSLKIIDTLIDAGADALELGVP 53 (268)
T ss_dssp HHHHHHHHHHHTTCCEE-EEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECC
T ss_pred HHHHHHHHHHHCCCCEE-EEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 69999999997599458-9889295798899999999999769999997998
No 113
>>3e7h_A DNA-directed RNA polymerase subunit beta; structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomics; 1.70A {Vibrio cholerae} (A:7-87)
Probab=25.90 E-value=45 Score=14.44 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=31.4
Q ss_pred HHHHCCCCEEEECCEE-CCCCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf 8886099899991700-478867899999999837998999342
Q gi|254780659|r 25 LIRDFQLDFVIANGEN-SAGGFGITEKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 25 l~~~~~~DfvIaNgEN-aa~G~Git~~~~~~l~~~GvDviT~GN 67 (274)
++-+.-.-=++.+||- +..|.=||+.++++|.++|+.-|-.-.
T Consensus 14 ~~G~~~~~DIvdtGeviv~~g~kIT~~~~kkl~~aGi~~i~v~~ 57 (81)
T 3e7h_A 14 LRGETATFDIEADGKVYVEKGRRVTARHIRQLEKDGVNFIEVPV 57 (81)
T ss_dssp HTTCBCSSCEEETTEEEECTTCBCCHHHHHHHHHTTCCEEEECG
T ss_pred HCCCCCCCCCCCCCEEEEECCCEECHHHHHHHHHCCCCEEECCH
T ss_conf 67876452303599099937976389999998647685598177
No 114
>>1ulu_A Enoyl-acyl carrier protein reductase; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} (A:)
Probab=25.75 E-value=45 Score=14.42 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=34.8
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHC-CCEEEECCC
Q ss_conf 478867899999999837998999342653022204754218-938975007
Q gi|254780659|r 41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRH-CKFLRPANY 91 (274)
Q Consensus 41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~-~~ilRP~N~ 91 (274)
+++++||...++++|.+.|.+|+-.+.+-=+..+....+.+. ....-++..
T Consensus 16 ass~~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (261)
T 1ulu_A 16 VTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADV 67 (261)
T ss_dssp CCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 9998649999999999879999998074777999998640258502103346
No 115
>>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B* (A:34-183)
Probab=25.56 E-value=46 Score=14.40 Aligned_cols=41 Identities=22% Similarity=0.341 Sum_probs=18.3
Q ss_pred HHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCC
Q ss_conf 80898886099899991700478867899999999837998
Q gi|254780659|r 21 MLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGID 61 (274)
Q Consensus 21 ~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvD 61 (274)
.+++|.++++++.|..|-|-.....=.-.++.+.|.+.|++
T Consensus 93 ~~~~l~~~~~i~~V~~~~~~~~~~~~~d~~i~~~l~~~gi~ 133 (150)
T 2j4d_A 93 ILPSLAKDFGARTVFAHKETCSEEVDVERLVNQGLKRVGNS 133 (150)
T ss_dssp HHHHHHHHHTCSEEEEECCCSHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999996787589824656779999999999998762365
No 116
>>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* (A:)
Probab=25.22 E-value=29 Score=15.69 Aligned_cols=22 Identities=18% Similarity=0.083 Sum_probs=9.5
Q ss_pred EEEECCCCCHHHHHHHHHHHCC
Q ss_conf 9996257622899999976089
Q gi|254780659|r 149 IVFDFHAETTSEKQCFAHFVDS 170 (274)
Q Consensus 149 i~VDfHaEaTSEK~A~g~~lDG 170 (274)
|++|+=-..-.=+.++....||
T Consensus 170 I~~~gGI~~~~v~~~~~~Gad~ 191 (231)
T 3ctl_A 170 IEVDGSCNQATYEKLMAAGADV 191 (231)
T ss_dssp EEEESCCSTTTHHHHHHHTCCE
T ss_pred EEEECCCCHHHHHHHHHCCCCE
T ss_conf 9997899989999999879999
No 117
>>1yzf_A Lipase/acylhydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Enterococcus faecalis V583} (A:)
Probab=25.05 E-value=41 Score=14.67 Aligned_cols=142 Identities=10% Similarity=0.042 Sum_probs=71.2
Q ss_pred CEEEEEEECCC------HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC---CCHHHHHHHHHCCCCEEEE---CHH
Q ss_conf 92699972027------68899999980898886099899991700478867---8999999998379989993---426
Q gi|254780659|r 1 MRLLFLGDIVG------KTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG---ITEKIFCEMMETGIDVITT---GNH 68 (274)
Q Consensus 1 MkiLfiGDIvG------~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G---it~~~~~~l~~~GvDviT~---GNH 68 (274)
|||+|+||=+- .++.......-..|+.++...+.+.|.- .+|.. ......+.+.....|+|.. +|-
T Consensus 2 k~i~~iGDS~t~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~n~~--~~g~~~~~~~~~~~~~~~~~~~d~vii~~G~ND 79 (195)
T 1yzf_A 2 RKIVLFGDSITAGYLDEAVSPVLVDLVKRDIAAMGLEEVAVINAG--MPGDTTEDGLKRLNKEVLIEKPDEVVIFFGAND 79 (195)
T ss_dssp EEEEEEESHHHHCBTTBSSCSHHHHHHHHHHHHTTBCCEEEEEEE--CTTCCHHHHHHHHHHHTGGGCCSEEEEECCTTT
T ss_pred CEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE--CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 899999252316838888764089999999886268874899842--044102345543112311556666898423441
Q ss_pred HHCCC-C-HHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 53022-2-047542189389750079888754079998489928999996000058833259899999998634136899
Q gi|254780659|r 69 VWDKR-E-ALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQA 146 (274)
Q Consensus 69 ~wd~k-e-i~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~ 146 (274)
.+... + ...+.+.-..+++ ..+..+. .+.++-........+..........+.+.++- ++.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~------~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 142 (195)
T 1yzf_A 80 ASLDRNITVATFRENLETMIH------EIGSEKV---------ILITPPYADSGRRPERPQTRIKELVKVAQEVG--AAH 142 (195)
T ss_dssp TCTTSCCCHHHHHHHHHHHHH------HHCGGGE---------EEECCCCCCTTTCTTSCHHHHHHHHHHHHHHH--HHT
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHCCCCE---------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHC
T ss_conf 443222479999999999999------8169988---------99934632235542016899999999999999--870
Q ss_pred CEEEEECCCCCHHHH
Q ss_conf 889996257622899
Q gi|254780659|r 147 DVIVFDFHAETTSEK 161 (274)
Q Consensus 147 ~~i~VDfHaEaTSEK 161 (274)
.+.++|++...-.+.
T Consensus 143 ~~~~~d~~~~~~~~~ 157 (195)
T 1yzf_A 143 NLPVIDLYKAMTVYP 157 (195)
T ss_dssp TCCEECHHHHHHHST
T ss_pred CCCCCCHHHHHHHCC
T ss_conf 887534799984168
No 118
>>1tb3_A Hydroxyacid oxidase 3; flavoprotein, oxidoreductase; HET: FMN; 2.30A {Rattus norvegicus} (A:)
Probab=24.83 E-value=47 Score=14.31 Aligned_cols=27 Identities=7% Similarity=0.069 Sum_probs=11.7
Q ss_pred HHHHHHHHCCCCEEEECHHHHCCCCHH
Q ss_conf 999999837998999342653022204
Q gi|254780659|r 50 KIFCEMMETGIDVITTGNHVWDKREAL 76 (274)
Q Consensus 50 ~~~~~l~~~GvDviT~GNH~wd~kei~ 76 (274)
..+..-...|+=-.++..-.....++.
T Consensus 90 ~~a~~a~~~g~~~~~~s~~~~~~~~~~ 116 (352)
T 1tb3_A 90 STARAAQEANICYVISSYASYSLEDIV 116 (352)
T ss_dssp HHHHHHHHHTCCEEECTTCSSCHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf 899999997213222333332057788
No 119
>>1zgg_A Putative low molecular weight protein-tyrosine- phosphatase YWLE; alpha/beta, four-stranded parallel beta sheet, structural genomics; NMR {Bacillus subtilis} (A:)
Probab=24.57 E-value=48 Score=14.28 Aligned_cols=79 Identities=22% Similarity=0.185 Sum_probs=44.1
Q ss_pred CEEEEEEECCCHHHHHHHHHH-HHHHHHHCCCC-EEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHH
Q ss_conf 926999720276889999998-08988860998-9999170047886789999999983799899934265302220475
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEM-LPRLIRDFQLD-FVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVF 78 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~-Lp~l~~~~~~D-fvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~ 78 (274)
|||||+- .|...|.-+.+. +..+-++..+. -|.+-|=-+..+.-+.+.....|.+.|+|. .|.+. +-.-+.
T Consensus 1 m~VLFvC--~~N~~RS~mAEai~~~~~~~~g~~~~v~s~g~~~~~~~~~~~~a~~~l~~~gi~~----~~~~~-~~~~~~ 73 (150)
T 1zgg_A 1 MDIIFVC--TGNTCRSPMAEALFKSIAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIAL----NHVSS-PLTEEL 73 (150)
T ss_dssp CEEEEEC--TTSTTTHHHHHHHHHHHHHHHTCCCEEEEEBTTCCTTCBCCTTHHHHHHHTTSCC----CCBCC-BCCHHH
T ss_pred CEEEEEC--CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC----CCCHH-HHHHHH
T ss_conf 9699986--9956799999999999999869943786453344656777638899988723220----01001-305876
Q ss_pred HHHCCCEE
Q ss_conf 42189389
Q gi|254780659|r 79 SQRHCKFL 86 (274)
Q Consensus 79 i~~~~~il 86 (274)
+++.+.||
T Consensus 74 ~~~~DlIi 81 (150)
T 1zgg_A 74 MESADLVL 81 (150)
T ss_dssp HHHCSEEE
T ss_pred CCCCCEEH
T ss_conf 30213201
No 120
>>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural genomics, joint center for structural genomics, JCSG; 2.18A {Thermotoga maritima MSB8} (A:)
Probab=23.27 E-value=50 Score=14.12 Aligned_cols=42 Identities=17% Similarity=0.066 Sum_probs=25.5
Q ss_pred HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHH
Q ss_conf 98089888609989999170047886789999999983799899934265
Q gi|254780659|r 20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHV 69 (274)
Q Consensus 20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~ 69 (274)
..+..++.....-.|+.+. .|.+.+..+.++|+|.|..+||-
T Consensus 268 ~~~~~~~~~~~~~~v~~~v--------~~~~~a~~a~~~G~D~i~v~~~~ 309 (494)
T 1vrd_A 268 TLEMIKADYPDLPVVAGNV--------ATPEGTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp HHHHHHHHCTTSCEEEEEE--------CSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHCCCCCEEEEEE--------CCHHHHHHHHHHCCCEEEECCCC
T ss_conf 9999998789985798762--------57999999997289889854658
No 121
>>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A* (A:1-87)
Probab=23.14 E-value=50 Score=14.15 Aligned_cols=31 Identities=6% Similarity=0.066 Sum_probs=19.9
Q ss_pred HHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 88609989999170047886789999999983799899
Q gi|254780659|r 26 IRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI 63 (274)
Q Consensus 26 ~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi 63 (274)
.-..+||+||++. +..++.+++|.++|+-++
T Consensus 56 i~~l~PDlVi~~~-------~~~~~~~~~l~~~g~~v~ 86 (87)
T 2q8p_A 56 VKKLKPTHVLSVS-------TIKDEXQPFYKQLNXKGY 86 (87)
T ss_dssp HHHTCCSEEEEEG-------GGHHHHHHHHHHHTSCCE
T ss_pred HHHCCCCEEEEEC-------CCCHHHHHHHHHHCCCEE
T ss_conf 9844898899625-------656899999875225422
No 122
>>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, structural genomics, joint center for structural genomics, JCSG; 1.91A {Haemophilus somnus 129PT} (A:)
Probab=23.10 E-value=51 Score=14.10 Aligned_cols=71 Identities=11% Similarity=0.110 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHH------------HCCCEEEEEECCCCCCCCHHHHCCCC
Q ss_conf 259899999998634136899889996257622899999976------------08957799806976246545640367
Q gi|254780659|r 126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHF------------VDSRASLVVGTHTHIPTADAQILDGG 193 (274)
Q Consensus 126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~------------lDGrVsaVvGTHTHV~TaD~rILp~G 193 (274)
..+|-..++.+.+. .+|. +-+|+||+..-.+.--. ..=++...+.-+|.+..-..-+ .+
T Consensus 78 ~~d~~~~i~~~~~a-----Gad~--itvh~ea~~~~~~~l~~I~~~~~~~~~~~~~i~~gl~~~p~t~~~~~~~~~--~~ 148 (237)
T 3cu2_A 78 VRNQLEVAKAVVAN-----GANL--VTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYL--DQ 148 (237)
T ss_dssp CSCHHHHHHHHHHT-----TCSE--EEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTT--TT
T ss_pred EECCCCHHHHHCCC-----CCEE--EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH--HH
T ss_conf 73353111222036-----7628--999646666689999987766566676540346652650567699999988--55
Q ss_pred EEEE----ECCCCCCC
Q ss_conf 2898----40560137
Q gi|254780659|r 194 TGYI----TDLGMCGD 205 (274)
Q Consensus 194 Tayi----TDvGMtG~ 205 (274)
--++ .+.|-.|.
T Consensus 149 vd~vlimsv~pG~~gq 164 (237)
T 3cu2_A 149 IDVIQLLTLDPRNGTK 164 (237)
T ss_dssp CSEEEEESEETTTTEE
T ss_pred HHHEEEEECCCCCCCC
T ss_conf 3001475136742343
No 123
>>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function, NPPSFA; 2.60A {Thermus thermophilus HB8} (A:103-213)
Probab=22.94 E-value=40 Score=14.79 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHCCCCEEEECCEECC-------CCCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf 99998089888609989999170047-------88678999999998379989993426530
Q gi|254780659|r 17 IVYEMLPRLIRDFQLDFVIANGENSA-------GGFGITEKIFCEMMETGIDVITTGNHVWD 71 (274)
Q Consensus 17 ~v~~~Lp~l~~~~~~DfvIaNgENaa-------~G~Git~~~~~~l~~~GvDviT~GNH~wd 71 (274)
.+.+.+.++++.++...+..+..+.. .|.| ...+.++|+|++-+|+=.|+
T Consensus 35 s~~el~~~lk~~l~~~~~~~~~~~~~i~~vai~~Gsg-----~~~~~~ag~D~~ITGe~~~h 91 (111)
T 2yyb_A 35 PLLQVADRLGQLTGMQPLVHQGGLDHVETVILVSGSG-----TGLLPKVDADLFVTGEPKHS 91 (111)
T ss_dssp CBSTHHHHHHHTTSSCCEEEESSCSBCCCEEEECSSC-----GGGGGGCCSSEEEESCCCGG
T ss_pred CHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCC-----CCHHHHCCCCEEEECCCCHH
T ss_conf 7999999999982998434246666675799993465-----32577468478984676758
No 124
>>2hsj_A Putative platelet activating factor; structral genomics, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.50A {Streptococcus pneumoniae TIGR4} (A:34-176)
Probab=22.40 E-value=34 Score=15.26 Aligned_cols=24 Identities=4% Similarity=-0.000 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 8999999986341368998899962
Q gi|254780659|r 129 PFRTADKILATCPLKEQADVIVFDF 153 (274)
Q Consensus 129 PF~~~d~~l~~~~~~~~~~~i~VDf 153 (274)
-.....+.+.++- .++.++.++||
T Consensus 119 ~~~~~~~~~~~~a-~~~~~v~~~D~ 142 (143)
T 2hsj_A 119 KIQNWNQAYQELA-SAYXQVEFVPV 142 (143)
T ss_dssp HHHHHHHHHHHHH-TTCTTEEEECC
T ss_pred HHHHHHHHHHHHH-HCCCCEEEEEC
T ss_conf 9999999999864-01378289875
No 125
>>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus} (A:125-258,A:355-392)
Probab=22.04 E-value=53 Score=13.96 Aligned_cols=105 Identities=17% Similarity=0.254 Sum_probs=48.2
Q ss_pred EEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHH------------------------HHHHCCCC
Q ss_conf 972027688999999808988860998999917004788678999999------------------------99837998
Q gi|254780659|r 6 LGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFC------------------------EMMETGID 61 (274)
Q Consensus 6 iGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~------------------------~l~~~GvD 61 (274)
--|-+|+...+.+++.|.+. ++-|+..+.-..+..=-..... ++.++|.+
T Consensus 27 ~d~~~G~~~~~~f~~~l~~~------G~evv~~~~~~~~~~d~s~~i~~ik~a~pdvVv~~~~~~~~~~ilk~a~~~G~~ 100 (172)
T 3lkb_A 27 HPSPFGRAPVEDARKAAREL------GLQIVDVQEVGSGNLDNTALLKRFEQAGVEYVVHQNVAGPVANILKDAKRLGLK 100 (172)
T ss_dssp CSSHHHHTTHHHHHHHHHHH------TCEEEEEEECCTTCCCCHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHHHHC------CCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCC
T ss_conf 35630389999999999874------987999981489972355788876536998999936626799999999983999
Q ss_pred EEEECHHHHCCCCHHHHHHH-CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHH
Q ss_conf 99934265302220475421-8938975007988875407999848992899999600005883325989999
Q gi|254780659|r 62 VITTGNHVWDKREALVFSQR-HCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTA 133 (274)
Q Consensus 62 viT~GNH~wd~kei~~~i~~-~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~ 133 (274)
....|...|...++.+...+ ...++=+.+|.+. |.++++.++| -|. | +..||.++
T Consensus 101 ~~~i~~~~~~~~~~~~~~g~~~eGv~~~~~~~~~----~~~~~~~~~~-----------~~~-~-~~~~~~~~ 156 (172)
T 3lkb_A 101 MRHLGAHYTGGPDLIALAGDAAEGFLWATSFYMA----GLRILEAKGG-----------RFV-P-VTEPFTSA 156 (172)
T ss_dssp CEEEECGGGCSHHHHHHHGGGGTTCEEEESBCCT----CBEEEEEETT-----------EEE-E-CSCCBCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCC----CEEEEEEECC-----------EEE-E-ECCCCCCC
T ss_conf 6499955678888998878875877999952777----4899999999-----------799-9-25753412
No 126
>>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} (A:1-259)
Probab=21.84 E-value=54 Score=13.94 Aligned_cols=58 Identities=10% Similarity=0.000 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC-CCCH
Q ss_conf 999808988860998999917004788678999999998379989993426530-2220
Q gi|254780659|r 18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD-KREA 75 (274)
Q Consensus 18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd-~kei 75 (274)
....|+.|.++++++.|.+|.+=...++=.-.++.+.+.+.||.+.+--.|..- ..++
T Consensus 89 ~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~i~~~~~~~~i~~~~~~~~~l~~~~~~ 147 (259)
T 1u3d_A 89 SVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNADLLYEPWEV 147 (259)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCSHHHHHHHHHHHHHHHTTTCEEEEECCSCSSCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCHHHHHCCEEEEECCCCCCCHHCCC
T ss_conf 69999999998199889993321604542010110023305807996046431000023
No 127
>>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} (A:)
Probab=21.73 E-value=22 Score=16.41 Aligned_cols=98 Identities=13% Similarity=-0.010 Sum_probs=61.7
Q ss_pred CCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEE---ECCCCCEEEEEEEEHH
Q ss_conf 8867899999999837998999342653022204754218938975007988875407999---8489928999996000
Q gi|254780659|r 43 GGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGSGLY---CAKNGSNVLVANIMGR 119 (274)
Q Consensus 43 ~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG~G~~i~---~~~~g~ki~Vinl~Gr 119 (274)
++.||...++++|.+.|.+|+-.+-....-++....+.+...-..+....-..+..--..+ ....|.--.++|-.|.
T Consensus 52 gs~GIG~aia~~la~~Ga~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lV~nag~ 131 (285)
T 2c07_A 52 AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGI 131 (285)
T ss_dssp TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCC
T ss_conf 88589999999999869999999799999999999999629948999843899999999999999864997542012233
Q ss_pred HCCCCC---------------CCCHHHHHHHHHHHC
Q ss_conf 058833---------------259899999998634
Q gi|254780659|r 120 VFMNPL---------------LDDPFRTADKILATC 140 (274)
Q Consensus 120 ~fM~~~---------------~d~PF~~~d~~l~~~ 140 (274)
....+. +..+|.....++...
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m 167 (285)
T 2c07_A 132 TRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRM 167 (285)
T ss_dssp CCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCC
T ss_conf 333222345388865330577641011111257331
No 128
>>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.99A {Actinobacillus succinogenes 130Z} (A:1-107,A:239-285)
Probab=21.71 E-value=54 Score=13.92 Aligned_cols=95 Identities=13% Similarity=0.112 Sum_probs=68.8
Q ss_pred CCCCCHHHH-HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEE-EECCC
Q ss_conf 332598999-9999863413689988999625762289999997608957799806976246545640367289-84056
Q gi|254780659|r 124 PLLDDPFRT-ADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGY-ITDLG 201 (274)
Q Consensus 124 ~~~d~PF~~-~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTay-iTDvG 201 (274)
|.+++||.. +-+-+++.-.+.+++.++.....+...|+.++-.....++.+++=.-+.......+.+..+.-+ .-|-.
T Consensus 16 pdl~npf~~~ii~gi~~~a~~~Gy~lvI~~~~~d~~~~~~~i~~l~~~~vDGIII~~~~~~~~~~~~l~~~IPvVlid~~ 95 (154)
T 3c3k_A 16 SNIANPFCAAVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSELPELQNIIGAFPWVQCAEY 95 (154)
T ss_dssp SCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGGGHHHHHHHHTTSSEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEC
T ss_conf 98878899999999999999859989999789998999998766540455423321234328999850368878998404
Q ss_pred CCCCHHHCCCCCHHHHH
Q ss_conf 01371210354746789
Q gi|254780659|r 202 MCGDYNSSIGLDKEEPI 218 (274)
Q Consensus 202 MtG~~~SVIG~~~~~~i 218 (274)
..++..+-++.|.|.+=
T Consensus 96 ~~~~~~~~V~~D~~~~~ 112 (154)
T 3c3k_A 96 DPLSTVSSVSIDSEQIG 112 (154)
T ss_dssp CTTSSSCEEECCHHHHH
T ss_pred CCCCCCCCCCCCHHHHH
T ss_conf 78777663244699999
No 129
>>1o4u_A Type II quinolic acid phosphoribosyltransferase; TM1645, structural genomics, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} (A:160-272)
Probab=21.70 E-value=17 Score=17.20 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf 99980898886099899991700478867899999999837998999342
Q gi|254780659|r 18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GN 67 (274)
....+..+|+....+.+|.+.- -+.+.+.++.++|+|+|..|.
T Consensus 20 ~~~~i~~ir~~~~~~~~i~~~~-------~~~~e~~~a~~~g~D~i~~~~ 62 (113)
T 1o4u_A 20 AERAVQEVRKIIPFTTKIEVEV-------ENLEDALRAVEAGADIVMLDN 62 (113)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEE-------SSHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHHHCCCCCEEEEEE-------CHHHHHHHHHHCCCCEEEECC
T ss_conf 7789998776458876179973-------339999999975998998479
No 130
>>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} (A:1-66,A:130-390)
Probab=21.20 E-value=21 Score=16.59 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=23.9
Q ss_pred CCCCCCHHHHHHHHHCCCCEEEECHHHHCC
Q ss_conf 886789999999983799899934265302
Q gi|254780659|r 43 GGFGITEKIFCEMMETGIDVITTGNHVWDK 72 (274)
Q Consensus 43 ~G~Git~~~~~~l~~~GvDviT~GNH~wd~ 72 (274)
-+..|..++.+.+.++|+|.|+.|+.+|.-
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l 69 (327)
T 2nq5_A 40 GAKELRLDFLKKQLNAGLDLIPVGDFSPKL 69 (327)
T ss_dssp HHHHHHHHHHHHHHHTTCSBEEESCCCCCC
T ss_pred HHHHHHHHHHHHHHHCCCCEECCCCCCCCC
T ss_conf 999999999999998599964789722346
No 131
>>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, structural genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis V583} (A:75-184)
Probab=21.13 E-value=55 Score=13.84 Aligned_cols=55 Identities=20% Similarity=0.340 Sum_probs=43.3
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf 3689988999625762289999997608957799806976246545640367289840560
Q gi|254780659|r 142 LKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM 202 (274)
Q Consensus 142 ~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM 202 (274)
..++.++++|+++-+-+.+|.+.+..+--+=.-.++||+- +++|.+-..+-|+|-
T Consensus 37 ~~~~~daVvvg~d~~~~y~~l~~a~~~~~~g~~~i~tn~D------~~~p~~~g~~pg~Ga 91 (110)
T 1yv9_A 37 DETNPDYVVVGLDTELSYEKVVLATLAIQKGALFIGTNPD------KNIPTERGLLPGAGS 91 (110)
T ss_dssp CSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC------SEEEETTEEEECHHH
T ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCC------CCCCCCCCEECCCCC
T ss_conf 3357752886465445567765555543046740551798------311343541314675
No 132
>>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} (A:)
Probab=20.89 E-value=56 Score=13.81 Aligned_cols=61 Identities=20% Similarity=0.110 Sum_probs=39.2
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 926999720276889999998089888609989999170047886789999999983799899
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI 63 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi 63 (274)
+||||+- .|..+|.-..+.+-+-.-.......=+-+..+..|..+.+...+.|.+.|+|.-
T Consensus 5 ~~IlFVC--~~N~~RS~mAEai~~~~~~~~~~~~Sag~~~~~~~~~~~~~a~~~l~~~gid~s 65 (146)
T 1p8a_A 5 KAVLFVC--LGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDIS 65 (146)
T ss_dssp CCEEEES--SSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCC
T ss_pred CEEEEEE--CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 9899997--985889999999999866577634677750445578789899999987099840
No 133
>>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydrolase., PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A (A:74-183)
Probab=20.83 E-value=56 Score=13.80 Aligned_cols=55 Identities=16% Similarity=0.221 Sum_probs=43.0
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf 3689988999625762289999997608957799806976246545640367289840560
Q gi|254780659|r 142 LKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM 202 (274)
Q Consensus 142 ~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM 202 (274)
..++.++++|+++-+-+.+|.+.+.++--+=.-.+.||+- ++.|.+...+-|.|.
T Consensus 37 ~~~~~~aVvvg~~~~~~y~~l~~a~~~~~~g~~~i~tn~D------~~~p~~~g~~pg~Ga 91 (110)
T 3epr_A 37 DTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPD------LNIPTERGLLPGAGS 91 (110)
T ss_dssp CSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC------SEEEETTEEEECHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCC------EEEEECCCCEECCCC
T ss_conf 5668878998032234678899998876458703402577------178878951412565
No 134
>>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, X-RAY diffraction, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus} (A:)
Probab=20.62 E-value=57 Score=13.77 Aligned_cols=16 Identities=6% Similarity=0.071 Sum_probs=6.8
Q ss_pred HHHHHHHHHCCCCEEE
Q ss_conf 9999999837998999
Q gi|254780659|r 49 EKIFCEMMETGIDVIT 64 (274)
Q Consensus 49 ~~~~~~l~~~GvDviT 64 (274)
.+.++++.++|++.+-
T Consensus 68 ~~~~~~~~~aG~~~i~ 83 (254)
T 1vc4_A 68 VEAALAYARGGARAVS 83 (254)
T ss_dssp HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCCCEEE
T ss_conf 9999999845886799
No 135
>>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12} (A:1-125)
Probab=20.61 E-value=55 Score=13.88 Aligned_cols=15 Identities=20% Similarity=0.248 Sum_probs=6.6
Q ss_pred HHHHHHHHHCCCCEE
Q ss_conf 999999983799899
Q gi|254780659|r 49 EKIFCEMMETGIDVI 63 (274)
Q Consensus 49 ~~~~~~l~~~GvDvi 63 (274)
..++..++++|++|+
T Consensus 79 ~~~~~~al~~G~~v~ 93 (125)
T 3f4l_A 79 FEYAKRALEAGKNVL 93 (125)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred CCHHHHHHCCCHHHH
T ss_conf 005677632102322
No 136
>>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} (A:1-233)
Probab=20.56 E-value=57 Score=13.77 Aligned_cols=45 Identities=31% Similarity=0.429 Sum_probs=30.0
Q ss_pred CEEEEE-EECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCC
Q ss_conf 926999-720276889999998089888609989999170047886789
Q gi|254780659|r 1 MRLLFL-GDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGIT 48 (274)
Q Consensus 1 MkiLfi-GDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git 48 (274)
||||.- -|=+-.||.+++.+.| ++.+++-.|.=..|.|+-|..+|
T Consensus 1 M~ILlTNDDGi~spGi~aL~~~L---~~~~~V~VvAP~~~qSg~g~ait 46 (233)
T 1j9j_A 1 MRILVTNDDGIQSKGIIVLAELL---SEEHEVFVVAPDKERSATGHSIT 46 (233)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHH---TTTSEEEEEEESSCCTTCTTCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHH---HCCCEEEEEECCCCCCCCCCCCC
T ss_conf 95999727998976799999998---66991999956998766603444
No 137
>>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} (A:)
Probab=20.46 E-value=57 Score=13.75 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=26.0
Q ss_pred HHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEE
Q ss_conf 808988860998999917004788678999999998379989993
Q gi|254780659|r 21 MLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITT 65 (274)
Q Consensus 21 ~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~ 65 (274)
.++++-..+.+|.||+. +|.+...+.|.++||.++.+
T Consensus 56 ~~~~~l~~~~v~~vi~~--------~iG~~~~~~l~~~gI~v~~~ 92 (124)
T 1eo1_A 56 RTAQIIANNGVKAVIAS--------SPGPNAFEVLNELGIKIYRA 92 (124)
T ss_dssp THHHHHHHTTCCEEEEC--------CSSHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHCCCCEEEEC--------CCCHHHHHHHHHCCCEEEEC
T ss_conf 67999997699899988--------67988999999879999973
No 138
>>1y0e_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; mannac-6-P epimerase, NANE, structural genomics, protein structure initiative; 1.95A {Staphylococcus aureus subsp} (A:1-207)
Probab=20.10 E-value=58 Score=13.70 Aligned_cols=19 Identities=21% Similarity=0.109 Sum_probs=13.7
Q ss_pred HHHHHHHHHCCCCEEEECH
Q ss_conf 9999999837998999342
Q gi|254780659|r 49 EKIFCEMMETGIDVITTGN 67 (274)
Q Consensus 49 ~~~~~~l~~~GvDviT~GN 67 (274)
.+.++...++|+|.+....
T Consensus 26 ~e~a~~~~~~G~~~i~~~~ 44 (207)
T 1y0e_A 26 SKXALAAYEGGAVGIRANT 44 (207)
T ss_dssp HHHHHHHHHHTCSEEEEES
T ss_pred HHHHHHHHHCCCEEEECCC
T ss_conf 9999999978996996499
No 139
>>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} (A:)
Probab=20.08 E-value=40 Score=14.77 Aligned_cols=48 Identities=13% Similarity=0.058 Sum_probs=24.5
Q ss_pred CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 59899999998634136899889996257622899999976089577998069762
Q gi|254780659|r 127 DDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTHI 182 (274)
Q Consensus 127 d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV 182 (274)
++|-..+.+++... ..+ +|-+|++++-+....-... +.-...-.||+.
T Consensus 61 ~~~~~~i~~~~~~~----g~~--~v~~h~~~~~~~~~~~~~~--~~~~~~~~~~~~ 108 (203)
T 1v5x_A 61 DQPPEEVLRLMEEA----RLQ--VAQLHGEEPPEWAEAVGRF--YPVIKAFPLEGP 108 (203)
T ss_dssp SCCHHHHHHHHHHT----TCS--EEEECSCCCHHHHHHHTTT--SCEEEEEECSSS
T ss_pred CCHHHHHHHHCCCC----CCC--CCCCCCCCCHHHHHHHHHC--CCCCEEECCCCH
T ss_conf 22576655200223----344--4434456898999998620--243245425753
No 140
>>1p90_A NAFY protein, hypothetical protein; ribonuclease H motif, protein binding; 1.80A {Azotobacter vinelandii} (A:)
Probab=20.01 E-value=59 Score=13.69 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=23.8
Q ss_pred HHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEE
Q ss_conf 808988860998999917004788678999999998379989993
Q gi|254780659|r 21 MLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITT 65 (274)
Q Consensus 21 ~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~ 65 (274)
.++.+...+++|.||+. ++.+..+..|.++||.|+++
T Consensus 58 ~~~~~l~~~~v~~vI~~--------~iG~~~~~~L~~~GI~v~~~ 94 (145)
T 1p90_A 58 NAWRVEQIQDCQVLYVV--------SIGGPAAAKVVRAGIHPLKK 94 (145)
T ss_dssp HHHHHHHTTTCSEEEES--------BCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHCCCCEEEEC--------CCCHHHHHHHHHCCCEEEEC
T ss_conf 34567764799799964--------46947999999889789984
Done!