HHsearch results for GI: 254780659 and protein with PDBid: 1s3l_A
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=96.49 E-value=0.053 Score=32.40 Aligned_cols=132 Identities=13% Similarity=0.112 Sum_probs=81.5
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE-EECHHHHCCCCHHHHH
Q ss_conf 926999720276889999998089888609989999170047886789999999983799899-9342653022204754
Q gi|254780659|r 1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI-TTGNHVWDKREALVFS 79 (274)
Q Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi-T~GNH~wd~kei~~~i 79 (274)
|||++|.|+=|. ..++++.|..+++ .++|.||.-|.-. .++..++|.+....++ ..|||=+.........
T Consensus 26 MKI~iiSDiHgn--~~ale~vl~~~~~-~~~D~vi~lGDiv------~~~~~~~l~~~~~~~~~V~GNhD~~~~~~~~~~ 96 (190)
T 1s3l_A 26 MKIGIMSDTHDH--LPNIRKAIEIFND-ENVETVIHCGDFV------SLFVIKEFENLNANIIATYGNNDGERCKLKEWL 96 (190)
T ss_dssp CEEEEECCCTTC--HHHHHHHHHHHHH-SCCSEEEECSCCC------STHHHHHGGGCSSEEEEECCTTCCCHHHHHHHH
T ss_pred CEEEEEECCCCC--HHHHHHHHHHHHH-CCCCEEEECCCCC------CHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 589999808999--6999999999975-5999999878838------989999987347608997276543035577776
Q ss_pred HHCC--CEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf 2189--38975007988875407999848992899999600005883325989999999863413689988999625762
Q gi|254780659|r 80 QRHC--KFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAET 157 (274)
Q Consensus 80 ~~~~--~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEa 157 (274)
.+.. +++ | -+..++. +|.++.++- | .|....+.+++. .++|
T Consensus 97 ~~~~~~~~~---------~--~~~~~~~-~~~~i~l~H--g---------~~~~~l~~~~~~----~~~d---------- 139 (190)
T 1s3l_A 97 KDINEENII---------D--DFISVEI-DDLKFFITH--G---------HHQSVLEMAIKS----GLYD---------- 139 (190)
T ss_dssp HHHCTTCEE---------E--SEEEEEE-TTEEEEEEE--S---------CCHHHHHHHHHH----SCCS----------
T ss_pred HHCCCCCCC---------C--CEEEEEE-CCCEEEEEE--C---------CCHHHHHHHHHC----CCCC----------
T ss_conf 531222235---------6--2134675-484899998--9---------812657888642----7976----------
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEE
Q ss_conf 2899999976089577998069762465456403672898
Q gi|254780659|r 158 TSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYI 197 (274)
Q Consensus 158 TSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayi 197 (274)
.++==|||+|-... .+||-++
T Consensus 140 ----------------iv~~GHTH~~~~~~---~~~~~~i 160 (190)
T 1s3l_A 140 ----------------VVIYGHTHERVFEE---VDDVLVI 160 (190)
T ss_dssp ----------------EEEEECSSCCEEEE---ETTEEEE
T ss_pred ----------------EEEECCCCCCCEEE---ECCEEEE
T ss_conf ----------------99999957632799---9999999