HHsearch alignment for GI: 254780660 and conserved domain: COG0217
>COG0217 Uncharacterized conserved protein [Function unknown].
Probab=100.00 E-value=0 Score=655.60 Aligned_cols=239 Identities=49% Similarity=0.723 Sum_probs=233.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC-CCCC
Q ss_conf 977411265564677557888979999999999999818999414899999999999668887899999985037-7666
Q gi|254780660|r 1 MAGHSQFKNIMHRKERKDALKSKIFSKLSREITVSAKLSGQNPLENPRLRLAIQNAKNQSMPKENIERAIKKAGS-DDLG 79 (244)
Q Consensus 1 maGHsKW~nIkh~K~~~D~~k~k~f~k~~keI~~A~k~gG~dp~~N~~L~~ai~~Ak~~~mPk~~Ie~aIkk~~~-~~~~ 79 (244)
T Consensus 1 MaGHsKw~nIkhrK~a~Dakr~Kif~Kl~keI~vAaK~Gg~dP~~NprLr~aI~kAk~~nmPkd~IerAI~ka~G~~d~~ 80 (241)
T COG0217 1 MAGHSKWANIKHRKAAQDAKRSKIFTKLIKEITVAAKQGGPDPESNPRLRTAIEKAKAANMPKDNIERAIKKASGGKDGA 80 (241)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 99651578888787787898877999999999999980699976298999999999881998789999997465888756
Q ss_pred CCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHCCC
Q ss_conf 64023678650599399999944630235899898764256831478860456864472797067753013667751268
Q gi|254780660|r 80 NYTNIRYEGYGPEGVAIIIEALTDNRNRTASSIRSIFTKANGSLGSTGSTTRFFEQIGEIIYHSNIGDSNLAMEVAIESD 159 (244)
Q Consensus 80 ~~~~~~yEg~gP~gvaiiVe~lTDN~nRt~~~vr~~f~K~gG~lg~~Gsv~~~F~~~G~i~~~~~~~d~d~~~e~aie~g 159 (244)
T Consensus 81 ~~~ei~YEGygP~GvaiiVe~LTDN~NRTas~vR~~F~K~GG~lg~~GSV~~mF~~kGvi~~~~~~~~ed~l~e~~ieag 160 (241)
T COG0217 81 NYEEIRYEGYGPGGVAIIVEALTDNRNRTASNVRSAFNKNGGNLGEPGSVSYMFDRKGVIVVEKNEIDEDELLEAAIEAG 160 (241)
T ss_pred CEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 54789998687984399998626885101899999997458751898617898755389998899899899999999778
Q ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 75223468825999643201345665420256742221786037610248989999999999875238881311025626
Q gi|254780660|r 160 AFEVLFEDQEYIFYCDFNNVGLTSKKLEEKIGEAQSIKVIWKPLNYIRLSNADKVKSIIKMIENLEDDDDVQSVYSNLEI 239 (244)
Q Consensus 160 a~Dv~~~d~~~~i~~~~~~~~~v~~~Le~~~~~~~~sei~~~P~~~V~l~d~e~~~~~~klie~Led~DDVq~VytN~~i 239 (244)
T Consensus 161 aeDv~~~~~~~~V~t~p~~~~~V~~~L~~~g~~~~~ael~~iP~~~v~~~~-e~a~k~~kLid~LEd~DDVQ~Vy~N~~~ 239 (241)
T COG0217 161 AEDVEEDEGSIEVYTEPEDFNKVKEALEAAGYEIESAELTMIPQNTVELDD-EDAEKLEKLIDALEDDDDVQNVYHNAEI 239 (241)
T ss_pred CHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCH-HHHHHHHHHHHHHHCCCCHHHHHHCCCC
T ss_conf 335433797299997857799999999976982001158995387651278-7899999999987441016787733755
Q ss_pred C
Q ss_conf 6
Q gi|254780660|r 240 A 240 (244)
Q Consensus 240 ~ 240 (244)
T Consensus 240 ~ 240 (241)
T COG0217 240 S 240 (241)
T ss_pred C
T ss_conf 7