HHsearch alignment for GI: 254780660 and conserved domain: pfam01709
>pfam01709 DUF28 Domain of unknown function DUF28. This domain is found in bacterial and yeast proteins it compromises the entire length or central region of most of the proteins in the family, all of which are hypothetical with no known function. The average length of this domain is approximately 230 amino acids long.
Probab=100.00 E-value=0 Score=621.43 Aligned_cols=233 Identities=47% Similarity=0.694 Sum_probs=227.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC-CCCCCCE
Q ss_conf 112655646775578889799999999999998189994148999999999996688878999999850377-6666402
Q gi|254780660|r 5 SQFKNIMHRKERKDALKSKIFSKLSREITVSAKLSGQNPLENPRLRLAIQNAKNQSMPKENIERAIKKAGSD-DLGNYTN 83 (244)
Q Consensus 5 sKW~nIkh~K~~~D~~k~k~f~k~~keI~~A~k~gG~dp~~N~~L~~ai~~Ak~~~mPk~~Ie~aIkk~~~~-~~~~~~~ 83 (244)
T Consensus 1 skw~~Ikh~K~~~D~~ksk~f~k~~reI~~A~k~GG~Dp~~N~~L~~ai~~Ak~~nmPk~~IerAIkk~~g~~~~~~~~e 80 (234)
T pfam01709 1 SKWANIKHRKAAQDAKRGKIFTKLIKEITVAAKMGGPDPEGNPRLRLAIEKAKAANMPKDNIERAIKKGSGGLDGENYEE 80 (234)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 98312311767878998899999999999999817999650999999999999818998899999985248887655158
Q ss_pred EEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 36786505993999999446302358998987642568314788604568644727970677530136677512687522
Q gi|254780660|r 84 IRYEGYGPEGVAIIIEALTDNRNRTASSIRSIFTKANGSLGSTGSTTRFFEQIGEIIYHSNIGDSNLAMEVAIESDAFEV 163 (244)
Q Consensus 84 ~~yEg~gP~gvaiiVe~lTDN~nRt~~~vr~~f~K~gG~lg~~Gsv~~~F~~~G~i~~~~~~~d~d~~~e~aie~ga~Dv 163 (244)
T Consensus 81 ~~YEg~gp~Gvaiive~lTDN~nRt~~~vR~~f~K~gG~lg~~GSV~~~F~~kG~i~i~~~~~~ee~l~e~aIe~GAeDv 160 (234)
T pfam01709 81 IRYEGYGPGGVAVIVECLTDNRNRTAADVRHAFSKNGGNLGESGSVSYMFDRKGVIVFEKEGVDEDELLEAALEAGAEDV 160 (234)
T ss_pred EEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEE
T ss_conf 88999837974999998178765579999999997298347987502442267899980799997999999986696213
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 346882599964320134566542025674222178603761024898999999999987523888131102562
Q gi|254780660|r 164 LFEDQEYIFYCDFNNVGLTSKKLEEKIGEAQSIKVIWKPLNYIRLSNADKVKSIIKMIENLEDDDDVQSVYSNLE 238 (244)
Q Consensus 164 ~~~d~~~~i~~~~~~~~~v~~~Le~~~~~~~~sei~~~P~~~V~l~d~e~~~~~~klie~Led~DDVq~VytN~~ 238 (244)
T Consensus 161 ~~~e~~~~i~~~~~~~~~v~~~Le~~g~~~~~sel~~~P~~~v~l~-~e~~~~~~klie~Lee~dDVq~Vy~N~e 234 (234)
T pfam01709 161 EDEDGSIEVITDPTDFEAVKKALEEAGLEIESAEITMIPQNTVELD-EEDAEKLEKLIDALEDLDDVQNVYHNAE 234 (234)
T ss_pred ECCCCCEEEEECHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCC-HHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 3158818999689999999999997528802304699438865119-9999999999998745568240633789