RPSBLAST alignment of GI: 254780660 and protein with PDBid: 1mw7
>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1 Length = 240
Score = 234 bits (599), Expect = 1e-62
Identities = 78/238 (32%), Positives = 124/238 (52%), Gaps = 8/238 (3%)
Query: 7 FKNIMHRKERKDALKSKIFSKLSREITVSAKLSGQNPLENPRLRLAIQNAKNQSMPKENI 66
F+ KE++ SK+F KL++ IT++AK G P N +LR AI NAK Q+MPK+NI
Sbjct: 5 FEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNI 64
Query: 67 ERAIKKAGSDDLGNYTNIRYEGYGPEGVAIIIEALTDNRNRTASSIRSIFTKANG-SLGS 125
+ AIK+A S + GN + I YEG GV II+E +TDN RT ++++S F K G S+
Sbjct: 65 DAAIKRASSKE-GNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
Query: 126 TGSTTRFFEQIGEIIYHSNIGDSNLAME-----VAIESDAFEVLFEDQEYIFYCDFNNVG 180
GS F + N ++ I+ E+ + + I D+N+
Sbjct: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFK 183
Query: 181 LTSKKLEEKIGEAQSIKVIWKPLNYIRLSNADKVKSIIKMIENLEDDDDVQSVYSNLE 238
L ++ E + I L N ++++ K+++ +EDDDDV ++Y+N+E
Sbjct: 184 LLNEGFESLKLPILKASLQRIATTPIEL-NDEQMELTEKLLDRIEDDDDVVALYTNIE 240