HHsearch alignment for GI: 254780661 and conserved domain: PRK06807

>PRK06807 DNA polymerase III subunit epsilon; Validated.
Probab=100.00  E-value=1.7e-33  Score=234.06  Aligned_cols=187  Identities=18%  Similarity=0.153  Sum_probs=151.1

Q ss_pred             CCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHH
Q ss_conf             88379997527889877260489999998389728040022662178887785789898579988996079997999999
Q gi|254780661|r    2 TNHFVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFSRR   81 (471)
Q Consensus         2 ~~~~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~~~   81 (471)
T Consensus         7 p~~fVV~DiETTGl~p~~D~IIEIgAVkv-~ng~Ivd~f~tL-I--nP~~~Ip~~It~ItGIT~emV~dAP-~f~EVl~~   81 (313)
T PRK06807          7 PLDYVVIDFETTGFNPYNDKIIQVAAVKY-RNHELVDQFVSY-V--NPERPIPDRITSLTGITNYRVSDAP-TIEEVLPL   81 (313)
T ss_pred             CCCEEEEEEECCCCCCCCCEEEEEEEEEE-ECCEEEEEEEEE-E--CCCCCCCHHHHHHCCCCHHHHHCCC-CHHHHHHH
T ss_conf             98789999788997999987899999999-999798999999-8--9489799667653397999982699-89999999


Q ss_pred             HHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf             99995117965999505578999999999850785321325688710015888865556532100244444544331089
Q gi|254780661|r   82 IHQFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQ  161 (471)
Q Consensus        82 i~~~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~~~~~kL~  161 (471)
T Consensus        82 f~~Fi~--d~iLVAHN-A~FD~~FL~~~L~r~gl~~~------~n~~IDTL~LAR~l---~----------P~L~NhKLn  139 (313)
T PRK06807         82 FLAFLH--TNVIVAHN-ASFDMRFLKSNVNMLGLPEP------KNKVIDTVFLAKKY---M----------KHAPNHKLE  139 (313)
T ss_pred             HHHHCC--CCEEEEEC-CHHHHHHHHHHHHHCCCCCC------CCCEEEHHHHHHHH---C----------CCCCCCCHH
T ss_conf             998738--99899955-36619999999997499888------99877659999986---4----------787656678


Q ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCHHHHHHHHH
Q ss_conf             89987188764310133318999999999986422689-99996238898997420
Q gi|254780661|r  162 DLALANGIEHVNAHDAKADVYATLALVWLIREKKPKLF-EYLYDYRNKNQLRKLID  216 (471)
Q Consensus       162 ~la~~n~i~~~~aH~A~~D~~~t~~l~k~i~~~~p~~~-~~~l~~~~K~~v~~~l~  216 (471)
T Consensus       140 TVa~~LgI~l-~HHrAldDA~acAeI~~k~~~~~~~~~~~~~~~~~~e~~~~~~i~  194 (313)
T PRK06807        140 TLKRMLGIRL-SSHNAFDDCITCAAVYQKCASIEEEAKRKSNKEVLDETAVYEAVK  194 (313)
T ss_pred             HHHHHHCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999839983-436717789999999999999886166665553225889999999