HHsearch alignment for GI: 254780661 and conserved domain: PTZ00166
>PTZ00166 DNA polymerase delta catalytic subunit; Provisional.
Probab=98.15 E-value=3.7e-05 Score=51.94 Aligned_cols=162 Identities=17% Similarity=0.174 Sum_probs=95.3
Q ss_pred CEEEEECCCCCC------CCCCCEEEEEEEEEECCCCEECCEE-EEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHH
Q ss_conf 379997527889------8772604899999983897280400-226621788877857898985799889960799979
Q gi|254780661|r 4 HFVIYDYETFGR------DVALDRPAQFAGVRVDRQWEKIEST-EVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEA 76 (471)
Q Consensus 4 ~~v~~D~ETtG~------~~~~~~iiq~~~i~~d~~~~~~~~~-~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~ 76 (471)
T Consensus 291 rilSfDIEC~~~~G~gFP~~~~DpVIqIs~~~~~-~g~~~~~~~~~~ftl--~~C~---------~I~g~~V~~F~-tE~ 357 (1081)
T PTZ00166 291 RILSFDIECIKLDGKGFPEANNDPVIQISSVLHT-HGDPLDSCKNFIFTL--KECA---------SLAGANVLWFD-NEK 357 (1081)
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEE-CCCCCCCCCCEEEEC--CCCC---------CCCCCEEEEEC-CHH
T ss_conf 6999867845888998989999957998579881-478887646446674--7877---------88997799709-999
Q ss_pred HHHHHHHHHHHCCCC-EEEEEECHHHHHHHHHHHHHHHCCCCCC---C-------------------------CCCCCCC
Q ss_conf 999999999511796-5999505578999999999850785321---3-------------------------2568871
Q gi|254780661|r 77 EFSRRIHQFFSVPNT-CIIGYNNIRFDDYYSRNIFYRNFYDSYR---W-------------------------SWDNGNS 127 (471)
Q Consensus 77 e~~~~i~~~~~~~~~-~~ig~N~~~FD~~~lr~~~~r~~~~~y~---~-------------------------~~~~~~~ 127 (471)
T Consensus 358 eLL~aF~~fi~~~DPDIITGYNI~nFDlpYLl~Ra~~L~i~~f~~lgRlk~~~~~~~~~~~~s~a~G~~~~k~i~i~GRv 437 (1081)
T PTZ00166 358 TLLLAWNDFIIAVDPDFLTGYNIINFDLPYLLNRATALNLKKFKFLTRIKSVKSTVKDSIFSSNQFGTHENKEINIEGRI 437 (1081)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCEE
T ss_conf 99999999998709989996687888889999999995886433236115776522026566555566655068675789
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-HCCCCCC-CCHH-------------------HHHHHHHHH
Q ss_conf 001588886555653210024444454433108989987-1887643-1013-------------------331899999
Q gi|254780661|r 128 RWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQDLALA-NGIEHVN-AHDA-------------------KADVYATLA 186 (471)
Q Consensus 128 ~~D~l~~~~~~~~~~p~~~~~~~~~~~~~~~kL~~la~~-n~i~~~~-aH~A-------------------~~D~~~t~~ 186 (471)
T Consensus 438 ~~Dl~~~v~r~--------------~kL~SYkLntVs~~fLgeqKeDV~~~~I~~l~~~~~e~r~rla~YClkDa~L~lr 503 (1081)
T PTZ00166 438 LFDVYDLIRRD--------------YKLKSYSLNYVSFEFLKEQKEDVHYSTINKLQNGNPEDRKRIASYCLKDSILPLR 503 (1081)
T ss_pred EEEHHHHHHHH--------------CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 96469999875--------------5878576888999981887533799999999814937889999998998999999
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780661|r 187 LVWLIR 192 (471)
Q Consensus 187 l~k~i~ 192 (471)
T Consensus 504 L~~KL~ 509 (1081)
T PTZ00166 504 LIDKLL 509 (1081)
T ss_pred HHHHHH
T ss_conf 999998