HHsearch alignment for GI: 254780661 and conserved domain: smart00474

>smart00474 35EXOc 3'-5' exonuclease. 3\' -5' exonuclease proofreading domain present in DNA polymerase I, Werner syndrome helicase, RNase D and other enzymes
Probab=97.71  E-value=0.0018  Score=41.07  Aligned_cols=132  Identities=18%  Similarity=0.126  Sum_probs=74.8

Q ss_pred             CEEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHH
Q ss_conf             37999752788987726048999999838972804002266217888778578989857998899607999799999999
Q gi|254780661|r    4 HFVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFSRRIH   83 (471)
Q Consensus         4 ~~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~~~i~   83 (471)
T Consensus        22 ~~i~~DtE~~~~~~~~~~l~~iq-l~~~~~-----~~--yi~--~~~~~-----------------------~~~~~~l~   68 (172)
T smart00474       22 GEVALDTETTGLNSYSGKLVLIQ-ISVTGE-----GA--FII--DPLAL-----------------------GDDLEILK   68 (172)
T ss_pred             CEEEEECCCCCCCCCCCEEEEEE-EEECCC-----EE--EEE--ECCCC-----------------------HHHHHHHH
T ss_conf             95999883068853787589999-996898-----48--997--01224-----------------------21799999


Q ss_pred             HHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             99511796599950557899999999985078532132568871001588886555653210024444454433108989
Q gi|254780661|r   84 QFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQDL  163 (471)
Q Consensus        84 ~~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~~~~~kL~~l  163 (471)
T Consensus        69 ~ll~~~~i~kv~hn-~k~D~~~L~~----~gi~l-------~~-v~Dt~ia~~l---~~~----------~~~~~~L~~l  122 (172)
T smart00474       69 DLLEDETITKVGHN-AKFDLHVLAR----FGIEL-------EN-IFDTMLAAYL---LLG----------GPSKHGLATL  122 (172)
T ss_pred             HHHCCCCCCEEEEC-HHHHHHHHHH----CCCCC-------CC-CHHHHHHHHH---CCC----------CCCHHHHHHH
T ss_conf             99809998599974-5999999997----79856-------75-2467998775---057----------9864899999


Q ss_pred             HHHH-CCCCC----------------CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             9871-88764----------------3101333189999999999864
Q gi|254780661|r  164 ALAN-GIEHV----------------NAHDAKADVYATLALVWLIREK  194 (471)
Q Consensus       164 a~~n-~i~~~----------------~aH~A~~D~~~t~~l~k~i~~~  194 (471)
T Consensus       123 ~~~~~~~~l~k~~~~~~w~~rpl~~~~~~YAa~Da~~~~~l~~~l~~~  170 (172)
T smart00474      123 LKEYLGVELDKEEQKSDWGARPLSEEQLQYAAEDADALLRLYEKLEKE  170 (172)
T ss_pred             HHHHCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999749231555564666789990999999999999999999999997