HHsearch results for GI: 254780661 and protein with PDBid: 1w0h_A

>1w0h_A 3'-5' exonuclease ERI1; nuclease domain, hydrolase; HET: AMP; 1.59A {Homo sapiens} SCOP: c.55.3.5
Probab=99.93  E-value=6.6e-24  Score=171.01  Aligned_cols=177  Identities=10%  Similarity=0.069  Sum_probs=135.7

Q ss_pred             CCCCEEEEECCCC----CCCCCCCEEEEEEEEEECC-CCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCH
Q ss_conf             9883799975278----8987726048999999838-9728040022662178887785789898579988996079997
Q gi|254780661|r    1 MTNHFVIYDYETF----GRDVALDRPAQFAGVRVDR-QWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVE   75 (471)
Q Consensus         1 m~~~~v~~D~ETt----G~~~~~~~iiq~~~i~~d~-~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~   75 (471)
                      |...||++|+|||    |.++..++|||+|||++|. ++.+.++|+. +|+|..+..++|.+..+|||+++++.+++ +.
T Consensus         8 ~~~~~vviD~ETT~~~~~~~~~~~~Iieigav~~d~~~~~~~~~f~~-~i~p~~~~~i~~~~~~i~git~e~~~~~~-~~   85 (204)
T 1w0h_A            8 YYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQ-YVRPEINTQLSDFCISLTGITQDQVDRAD-TF   85 (204)
T ss_dssp             SSSEEEECCCEECCCTTCCTTSCCCEEEEEEEEEETTTCSEEEEEEE-EBCCSSSCSCCHHHHHHHCCCHHHHHTSB-CH
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEE-EECCCCCCCCCHHHHHHCCCCHHHHHCCC-CH
T ss_conf             48828999960788889999999808999999998899779899999-97067798689899987299878985088-58


Q ss_pred             HHHHHHHHHHHHCC-----CCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             99999999995117-----9659995055789999999998507853213256887100158888655565321002444
Q gi|254780661|r   76 AEFSRRIHQFFSVP-----NTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPS  150 (471)
Q Consensus        76 ~e~~~~i~~~~~~~-----~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~  150 (471)
                      .++++.+.+++...     +.++++.|+..+|..|++..+.+..++...    .....+|+....+...           
T Consensus        86 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~-----------  150 (204)
T 1w0h_A           86 PQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPP----FAKKWINIRKSYGNFY-----------  150 (204)
T ss_dssp             HHHHHHHHHHHHHTTBTTTBCEEEEESSTTTTHHHHHHHHHHHTCCCCG----GGSEEEEHHHHHHHHH-----------
T ss_pred             HHHHHHHHHHHHCCCEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCCC----CCCCEEEHHHHHHHHH-----------
T ss_conf             9999999987522412223223221103564899999999981899864----2451676888888875-----------


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHH-HHHHHH
Q ss_conf             4454433108989987188764-31013331899999999-998642
Q gi|254780661|r  151 RDDGATSFKLQDLALANGIEHV-NAHDAKADVYATLALVW-LIREKK  195 (471)
Q Consensus       151 ~~~~~~~~kL~~la~~n~i~~~-~aH~A~~D~~~t~~l~k-~i~~~~  195 (471)
                       ..+..++||+.+++.+|++.. .||+|++||.+|++|++ +++.+.
T Consensus       151 -~~~~~~~kL~~l~~~~gi~~~~~aH~Al~Da~~ta~i~~~ll~~~~  196 (204)
T 1w0h_A          151 -KVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGC  196 (204)
T ss_dssp             -TCCGGGCSHHHHHHHTTCCCCSCTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred             -CCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             -0345788999999986999999884879999999999999998789