HHsearch results for GI: 254780661 and protein with PDBid: 1x9m_A
>1x9m_A DNA polymerase; DNA ploymerase, N-2-acetylaminofluorene, replication block, mutagenesis, transferase/electron transport/DNA complex; HET: DNA 2DT 8FG; 2.10A {Enterobacteria phage T7} SCOP: c.55.3.5 e.8.1.1 PDB: 1skr_A* 1skw_A* 1sl0_A* 1sks_A* 1sl2_A* 1t7p_A* 1t8e_A* 1tk0_A* 1tk5_A* 1tk8_A* 1tkd_A* 1sl1_A* 1x9s_A* 1x9w_A* 1zyq_A* 2ajq_A*
Probab=98.95 E-value=4e-09 Score=75.99 Aligned_cols=151 Identities=13% Similarity=-0.017 Sum_probs=89.7
Q ss_pred EEEEECCCCCCCCCCCEEEEEEEEEECCCCEECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 79997527889877260489999998389728040022662178887785789898579988996079997999999999
Q gi|254780661|r 5 FVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFSRRIHQ 84 (471)
Q Consensus 5 ~v~~D~ETtG~~~~~~~iiq~~~i~~d~~~~~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~~~i~~ 84 (471)
+++||+||||+++..+.|+-+++. |.+. +.+..+ .+. + ..+..+.+..
T Consensus 1 ~~v~DiET~gL~~~~~~i~~i~~~--d~~~---~~~~~~----~~~---~--------------------~~~~~~~l~~ 48 (698)
T 1x9m_A 1 MIVSDIEANALLESVTKFHCGVIY--DYST---AEYVSY----RPS---D--------------------FGAYLDALEA 48 (698)
T ss_dssp CEEEEEEESSCGGGCCCEEEEEEE--ETTT---TEEEEE----CGG---G--------------------HHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCCEEEEEEEE--ECCC---CEEEEE----CCC---C--------------------HHHHHHHHHH
T ss_conf 989991689977567879999999--7899---728984----765---4--------------------0579999999
Q ss_pred HHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCHHH
Q ss_conf 9511796599950557899999999985078532132568871001588886555653210024--44445443310898
Q gi|254780661|r 85 FFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQW--PSRDDGATSFKLQD 162 (471)
Q Consensus 85 ~~~~~~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~--~~~~~~~~~~kL~~ 162 (471)
.+... ..+||||.++||.++|+..+-..+...+. ......+|+|-++|++ .|+.... .....+...++|+.
T Consensus 49 ~l~~~-~~lVgHN~~~FD~~~L~k~~g~~~~~~~~---~~~~~v~DTmi~s~ll---~p~~~~~~~~~~~~~~~~hsL~a 121 (698)
T 1x9m_A 49 EVARG-GLIVFHNGHKYDVPALTKLAKLQLNREFH---LPRENCIDTLVLSRLI---HSNLKDTDMGLLRSGKLPGALEA 121 (698)
T ss_dssp HHHTT-CCEEESSTTTTHHHHHHHHHHHHHCCCCC---CCGGGEEEHHHHHHHH---TTTSCCCTTTTSCGGGSCSCCCH
T ss_pred HHHCC-CEEEECCCHHCCHHHHHHHHCCCCCCCCC---CCCCCEEEHHHHHHHH---CCCCCCCCCHHHHCCCCCCCHHH
T ss_conf 98559-96997572320899998873874233456---6778750277887663---99864443112202667878899
Q ss_pred HHHHHCCCCC-----------------------------CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9987188764-----------------------------3101333189999999999864
Q gi|254780661|r 163 LALANGIEHV-----------------------------NAHDAKADVYATLALVWLIREK 194 (471)
Q Consensus 163 la~~n~i~~~-----------------------------~aH~A~~D~~~t~~l~k~i~~~ 194 (471)
++...|..-+ -.+-|..||.+|..|.+.+...
T Consensus 122 ~g~rlg~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~s~em~~Ya~~Dv~iT~~L~~~l~~~ 182 (698)
T 1x9m_A 122 WGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSD 182 (698)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCTTGGGTSCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998586543137776432221022334413343348999999998999999999999998