HHsearch results for GI: 254780661 and protein with PDBid: 2is3_A
>2is3_A Ribonuclease T; RNAse, exoribonuclease, exonuclease, hydrolase, stable RNA maturation, tRNA END-turnover; 3.10A {Escherichia coli K12}
Probab=99.95 E-value=5.9e-27 Score=190.63 Aligned_cols=174 Identities=22% Similarity=0.194 Sum_probs=134.1
Q ss_pred EEEEECCCCCCCCCCCEEEEEEEEEEC--CCCE-ECCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHH
Q ss_conf 799975278898772604899999983--8972-8040022662178887785789898579988996079997999999
Q gi|254780661|r 5 FVIYDYETFGRDVALDRPAQFAGVRVD--RQWE-KIESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEAEFSRR 81 (471)
Q Consensus 5 ~v~~D~ETtG~~~~~~~iiq~~~i~~d--~~~~-~~~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~e~~~~ 81 (471)
+|++|+||||++|..|+|||+|||+++ .++. ++++.....++|.++...+|+++.+|||+++.+...+.+..+.+.+
T Consensus 19 ~Vv~D~ETTGl~p~~d~IIeIgav~i~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~i~gi~~~~~~~~~~~~~~~~~~ 98 (215)
T 2is3_A 19 PVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHE 98 (215)
T ss_dssp EEEEEEEESSSCTTTSCEEEEEEEEEEECTTSCEEEEEEEEEEBCCCTTCCCCHHHHHHHCCCTTCSTTCCBCHHHHHHH
T ss_pred EEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEECCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHH
T ss_conf 59998379999999983289999998956888683353599985268899988568760252138787079861253599
Q ss_pred HHHHHHC------CCC-EEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9999511------796-599950557899999999985078532132568871001588886555653210024444454
Q gi|254780661|r 82 IHQFFSV------PNT-CIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDG 154 (471)
Q Consensus 82 i~~~~~~------~~~-~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~~~ 154 (471)
+.+++.. .+. ++|||| ++||..||++.+.|++++... ...+..+|++.+.+.. .
T Consensus 99 ~~~~i~~~~~~~~~~~~~lVaHN-a~FD~~fL~~~~~r~~l~~~~---~~~~~~iDt~~~~~~~---~------------ 159 (215)
T 2is3_A 99 IFKVVRKGIKASGCNRAIMVAHN-ANFDHSFMMAAAERASLKRNP---FHPFATFDTAALAGLA---L------------ 159 (215)
T ss_dssp HHHHHHHHHHHHTCSEEEEEETT-HHHHHHHHHHHHHHHTCTTCC---EEEEEEEEHHHHHHHH---H------------
T ss_pred HHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCC---CCCHHHHHHHHHHHHH---H------------
T ss_conf 99999999876314655010037-687699999999983999886---5330167799999887---3------------
Q ss_pred CCCCCHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43310898998718876--431013331899999999998642268
Q gi|254780661|r 155 ATSFKLQDLALANGIEH--VNAHDAKADVYATLALVWLIREKKPKL 198 (471)
Q Consensus 155 ~~~~kL~~la~~n~i~~--~~aH~A~~D~~~t~~l~k~i~~~~p~~ 198 (471)
++++|+.+|.+.|++. .+||+|++||.+|++|+..+.++.++.
T Consensus 160 -~~~~L~~l~~~~~i~~~~~~~H~Al~Da~~ta~lf~~l~~~~~~~ 204 (215)
T 2is3_A 160 -GQTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRL 204 (215)
T ss_dssp -SCCSHHHHHHHTTCCCCTTTTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf -632499999985999999976786999999999999999999975