HHsearch results for GI: 254780661 and protein with PDBid: 3cg7_A
>3cg7_A CRN-4, cell death-related nuclease 4; hydrolase, apoptosis, 3'-5' exonuclease, deddh; 2.50A {Caenorhabditis elegans} PDB: 3cm5_A 3cm6_A
Probab=99.93 E-value=5.9e-24 Score=171.34 Aligned_cols=179 Identities=13% Similarity=0.059 Sum_probs=134.2
Q ss_pred CCEEEEECCCCCCCCCCC---EEEEEEEEEECC-CCEEC--CEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHH
Q ss_conf 837999752788987726---048999999838-97280--400226621788877857898985799889960799979
Q gi|254780661|r 3 NHFVIYDYETFGRDVALD---RPAQFAGVRVDR-QWEKI--ESTEVFFCKPADDYLPDPEAVFITGITPQKALRDGVVEA 76 (471)
Q Consensus 3 ~~~v~~D~ETtG~~~~~~---~iiq~~~i~~d~-~~~~~--~~~~~~~~~~~~~~~p~p~a~~v~git~~~~~~~~~~~~ 76 (471)
++||++|+||||+++..+ +|||||||++|. ++++. ++|+. +|+|......++.+..+||||++++.++ .++.
T Consensus 19 d~~vViD~ETTg~~~~~d~~~EIIEIgaV~vd~~~~~i~~~~~F~~-~VkP~~~~~ls~~~~~ltGIt~e~v~~a-p~f~ 96 (308)
T 3cg7_A 19 DTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNK-YVKPVLNRTLTKNCVDFTGIPQRSIDTA-DTFD 96 (308)
T ss_dssp SEEEEEEEEECCBTTBCSCCCCEEEEEEEEEETTTTEEEEEEEEEE-ECBCSSBCSCCHHHHHHHCCCHHHHHTS-CBHH
T ss_pred CEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEEECCEEEE-EECCCCCCCCCHHHHHHCCCCHHHHHCC-CHHH
T ss_conf 7189999760899878899960799999999805998978418887-7898888867988998719798994311-0045
Q ss_pred HHHHHHHHHHHCC----CCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 9999999995117----965999505578999999999850785321325688710015888865556532100244444
Q gi|254780661|r 77 EFSRRIHQFFSVP----NTCIIGYNNIRFDDYYSRNIFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRD 152 (471)
Q Consensus 77 e~~~~i~~~~~~~----~~~~ig~N~~~FD~~~lr~~~~r~~~~~y~~~~~~~~~~~D~l~~~~~~~~~~p~~~~~~~~~ 152 (471)
|+++++.+++... ..+.+++|+..++..|+++.+.+++++.... .+...|+..+.+..... ....
T Consensus 97 evl~~f~~~l~~~~l~~~~~~f~~~~~~D~~~~L~~~~~~~~i~~P~~----~~~~iDl~~~~~~~~~~-------~~~~ 165 (308)
T 3cg7_A 97 VVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAF----FRQYINLYKIFTNEMDR-------MGPK 165 (308)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEEEESSSHHHHTHHHHHHHHTTCCCCGG----GSEEEEHHHHHHHHHHH-------HCCC
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCC----CCCEEEHHHHHHHHHHH-------HHHC
T ss_conf 668899999736773232899931545669999999999809998720----13244599999999997-------4322
Q ss_pred CCCCCCCHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 54433108989987188764-3101333189999999999864
Q gi|254780661|r 153 DGATSFKLQDLALANGIEHV-NAHDAKADVYATLALVWLIREK 194 (471)
Q Consensus 153 ~~~~~~kL~~la~~n~i~~~-~aH~A~~D~~~t~~l~k~i~~~ 194 (471)
.+..+++|+.++..+||+.+ +||+|+.||.+|++|++.|.++
T Consensus 166 ~~~~~~~L~~l~~~~gI~~~g~aH~ALdDA~~tA~Il~kLl~~ 208 (308)
T 3cg7_A 166 ELSATTNIGKMNEYYDLPTIGRAHDAMDDCLNIATILQRMINM 208 (308)
T ss_dssp CCCCCSHHHHHHHHTTCCCCSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 7777778999999769999998968099999999999999977