PSIBLAST alignment of GI: 254780661 and protein with PDB id: 1j53

>gi|24987377|pdb|1J53|A Chain A, Structure Of The N-Terminal Exonuclease Domain Of The Epsilon Subunit Of E.Coli Dna Polymerase Iii At Ph 8.5 Length = 186
>gi|24987378|pdb|1J54|A Chain A, Structure Of The N-Terminal Exonuclease Domain Of The Epsilon Subunit Of E.Coli Dna Polymerase Iii At Ph 5.8 Length = 186

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 53/200 (26%), Gaps = 30/200 (15%)

Query: 6   VIYDYETFGRD-----VALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFI 60
           ++ D ET G +         +  +   V V            F      D L DPEA  +
Sbjct: 9   IVLDTETTGMNQIGAHYEGHKIIEIGAVEV-VNRRLTG--NNFHVYLKPDRLVDPEAFGV 65

Query: 61  TGITPQKALRDGVVEAEFSRRIHQFFSVPNTCIIGYNNIRFDDYYSRNIFYRNFYDSYRW 120
            GI  +  L      AE +     +        +  +N  FD  +     +         
Sbjct: 66  HGIADEFLLDKP-TFAEVADEFMDYIRGAE---LVIHNAAFDIGFMDYE-FSLLKRDIPK 120

Query: 121 SWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQDLALANGIEHVNA--HDAK 178
           +        D L V R ++                    L  L     I++     H A 
Sbjct: 121 TNTF-CKVTDSLAVARKMFPG--------------KRNSLDALCARYEIDNSKRTLHGAL 165

Query: 179 ADVYATLALVWLIREKKPKL 198
            D      +   +   +  +
Sbjct: 166 LDAQILAEVYLAMTGGQTSM 185