HHsearch alignment for GI: 254780662 and conserved domain: cd01076
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=99.48 E-value=5.1e-12 Score=123.83 Aligned_cols=194 Identities=26% Similarity=0.335 Sum_probs=141.6
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHH--HCCCCCEEEEEECCCEEEECCCC
Q ss_conf 6999988431011467899999999998089965486459960588633244311--12766208999739436867778
Q gi|254780662|r 915 GGSMGYDHKKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGM--LLSRKIQLVAAFDHSDIFIDPDP 992 (1576)
Q Consensus 915 Ggs~GydHK~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgm--Lls~~i~lvaafdh~hif~DP~P 992 (1576)
T Consensus 1 GGs~gR~----eATG~Gv~~~~~~~l~~~~~~l~g~~v~IqG----~GnVG~~~a~~L~~~Gakvv~vsD~~G~i~~~~- 71 (227)
T cd01076 1 GGSLGRE----EATGRGVAYATREALKKLGIGLAGARVAIQG----FGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPD- 71 (227)
T ss_pred CCCCCCC----CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC----CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCC-
T ss_conf 9999997----3328899999999999769897899999989----889999999999987995999984787388888-
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCC
Q ss_conf 81379899999996689870038978717897089821444217989998709885542888999863036530443387
Q gi|254780662|r 993 NSETTFDERKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGG 1072 (1576)
Q Consensus 993 D~~~s~~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gG 1072 (1576)
T Consensus 72 --Gld~~~l~~~~~~~~-~~~~~~~------~------------------------~~~~~~~----~~~~~~DI~---- 110 (227)
T cd01076 72 --GLDVPALLAYKKEHG-SVLGFPG------A------------------------ERITNEE----LLELDCDIL---- 110 (227)
T ss_pred --CCCHHHHHHHHHHCC-CCCCCCC------C------------------------CCCCCCC----HHCCCCCEE----
T ss_conf --899999999999659-8026788------7------------------------5389623----104788789----
Q ss_pred CCCEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHH
Q ss_conf 42111268986200152100000025883046899855510307678999997398683533134437324404767999
Q gi|254780662|r 1073 IGTYIRAPRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIKI 1152 (1576)
Q Consensus 1073 iGTYvka~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniKI 1152 (1576)
T Consensus 111 ----iP~A~~~~I-~~~--------~a~~l~ak~I~EgAN~p~t~~A~~~L~~rgI~viPD~laNaGGVivSy~Ew---- 173 (227)
T cd01076 111 ----IPAALENQI-TAD--------NADRIKAKIIVEAANGPTTPEADEILHERGVLVVPDILANAGGVTVSYFEW---- 173 (227)
T ss_pred ----EECCCCCCC-CHH--------HHHHCCCEEEEECCCCCCCHHHHHHHHHCCCEEECCHHHCCCCEEEEHHHH----
T ss_conf ----877766977-999--------985447619984578998988999999886989680774487744559998----
Q ss_pred HHHHHHHCCCCCHHHHHHHHHH-HHH
Q ss_conf 8658877079898899889998-789
Q gi|254780662|r 1153 ALASAMRDGRLTLENRNKLLSS-MTS 1177 (1576)
Q Consensus 1153 ll~~~~~~g~lt~~~Rn~lL~~-mtd 1177 (1576)
T Consensus 174 --~qn~~~~~w~~~~V~~~l~~~m~~ 197 (227)
T cd01076 174 --VQNLQGFYWDEEEVNSRLETKMRE 197 (227)
T ss_pred --HCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf --632556798999999999999999