HHsearch alignment of GI: 254780662 and MMDB domain: 1vl6_A_168-323

>1vl6_A (A:168-323) Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCSG, protein structure initiative, PSI; 2.61A {Thermotoga maritima MSB8}
Probab=96.75  E-value=0.0061  Score=42.70  Aligned_cols=146  Identities=16%  Similarity=0.121  Sum_probs=100.4

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHC
Q ss_conf             46789999999999808996548645996058863324431112766208999739436867778813798999999966
Q gi|254780662|r  928 TARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGMLLSRKIQLVAAFDHSDIFIDPDPNSETTFDERKRLFDS 1007 (1576)
Q Consensus       928 TarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgmLls~~i~lvaafdh~hif~DP~PD~~~s~~Er~RLf~l 1007 (1576)
                      |+.|+..+++.-.|..|.++....+-+.|.|.+..=+.  .+|...-.+.++..|..+...||....... .........
T Consensus         4 Tg~gv~~~~~~a~~~~~~~l~~~~v~v~G~G~vG~~~a--~~l~~~Ga~~i~v~d~~g~~~~~~~~~~~~-~~~~~~~~~   80 (156)
T 1vl6_A            4 TAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIV--KFLLDLGVKNVVAVDRKGILNENDPETCLN-EYHLEIARI   80 (156)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHH--HHHHHHTCCEEEEEETTEECCTTSGGGCSS-HHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHH--HHHHHHCCCCEEEEEEEEEEECCCCCCCCC-HHHHHHHHH
T ss_conf             78899999999998607874434899954637889999--999984786159995011675588644411-778998776


Q ss_pred             CCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCCCCCCCC
Q ss_conf             89870038978717897089821444217989998709885542888999863036530443387421112689862001
Q gi|254780662|r 1008 PSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGTYIRAPRENNADI 1087 (1576)
Q Consensus      1008 prssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGTYvka~~e~~~~v 1087 (1576)
                      ..+.+                                     ...+.    .++..++|+|-+++        .+.-.. 
T Consensus        81 ~~~~~-------------------------------------~~~~~----~~~~~~~DIlip~a--------~~~~i~-  110 (156)
T 1vl6_A           81 TNPER-------------------------------------LSGDL----ETALEGADFFIGVS--------RGNILK-  110 (156)
T ss_dssp             SCTTC-------------------------------------CCSCH----HHHHTTCSEEEECS--------CSSCSC-
T ss_pred             HHHCC-------------------------------------CCCCH----HHHCCCCCEEEECC--------CCCCCC-
T ss_conf             20011-------------------------------------10017----76425872564214--------567476-


Q ss_pred             CCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEE----CCC
Q ss_conf             52100000025883046899855510307678999997398683----533
Q gi|254780662|r 1088 GDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRIN----SDA 1134 (1576)
Q Consensus      1088 gd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~in----tDa 1134 (1576)
                              .-+.+.+.||.|+|++|-.+|+.+.-++-.+|+.+.    .|+
T Consensus       111 --------~e~~~~~~~r~Iv~~an~P~~~~~~~~l~~~g~~ivatG~pd~  153 (156)
T 1vl6_A          111 --------PEWIKKXSRKPVIFALANPVPEIDPELAREAGAFIVATGRSDH  153 (156)
T ss_dssp             --------HHHHTTSCSSCEEEECCSSSCSSCHHHHHHTTCSEEEESCTTS
T ss_pred             --------HHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCCC
T ss_conf             --------9888505899889982697244555335424959997698078