HHsearch results for GI: 254780662 and protein with PDBid: 1c1d_A
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.62 E-value=1.6e-13 Score=135.34 Aligned_cols=295 Identities=17% Similarity=0.133 Sum_probs=182.2
Q ss_pred CCEEEEEECCC-----EEEEEEECCCCCCCEEEE--ECCHHHHHHHHHHHHHHHHHCCCC--CCCCCCCEEEEECCCCCC
Q ss_conf 85699998386-----579984054233040420--088578888899989984532874--288875327871689988
Q gi|254780662|r 763 LHREIFVYGVE-----VEGVHLRCGKIARGGLRW--SDRAADYRTEVLGLVRAQKVKNAV--IVPVGAKGGFYPKRLPSE 833 (1576)
Q Consensus 763 P~~eifv~sp~-----~eGvHlR~g~vARGGlRw--SdR~edfrtEvlgL~kaQ~vKN~v--Ivp~GaKGgfv~k~~~~~ 833 (1576)
|-..+++|.|. +-.+|=--.--|.||+|+ +...++...|++.|++....||++ +|=+|+|||+.+......
T Consensus 10 ~e~~v~~~d~~tg~~~~iaihst~lGPakGGiR~~~~~~~~~~l~ev~~LA~~MT~K~Al~~lp~GGgKggI~~~p~~~~ 89 (355)
T 1c1d_A 10 GEMTVTRFDAMTGAHFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSVIALPAPRHS 89 (355)
T ss_dssp SSEEEEEEETTTTEEEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEEEECSSCGGG
T ss_pred CCEEEEEECCCCCCEEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
T ss_conf 84799986677785589999169988877706636889989999999999999999999818998871548832874355
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH-HHHHHHHHHHHCCCCCCCHH
Q ss_conf 99899999999999999989887762568884028831030538986799817788832-68999999988089985011
Q gi|254780662|r 834 GRRDEIIKIGREAYKTYVRALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT-FSDTANILAQEAKFWLDDAF 912 (1576)
Q Consensus 834 ~~r~~~~~e~~~~y~~fi~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~-fsD~An~ia~~~gfwlgdAF 912 (1576)
.+... +++ ..+.|.+.+-.+ . | +| +.|||-||.. -++|. ..+|++..|..-
T Consensus 90 ~~~~e-~e~---l~R~~~~~l~~l----~--------------G--~~-i~apDvgt~~~~m~~i---~d~~~~vtgkp~ 141 (355)
T 1c1d_A 90 IDPST-WAR---ILRIHAENIDKL----S--------------G--NY-WTGPDVNTNSADMDTL---NDTTEFVFGRSL 141 (355)
T ss_dssp CCHHH-HHH---HHHHHHHHHHHT----T--------------T--SE-EEEECTTCCHHHHHHH---HHHCSCBCCCCG
T ss_pred CCHHH-HHH---HHHHHHHHHHHH----C--------------C--CC-CCCCCCCCCHHHHHHH---HHHCCEEEECCC
T ss_conf 78789-999---999999998875----1--------------7--66-3345679888999998---533143230252
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCEEEEEECCCCCCCCCCH--HHCCCCCEEEEEECCCEEEEC
Q ss_conf 056999988431011467899999999998089-96548645996058863324431--112766208999739436867
Q gi|254780662|r 913 ASGGSMGYDHKKMGITARGAWETVKRHFREMDI-DIQSTPFTVAGVGDMSGDVFGNG--MLLSRKIQLVAAFDHSDIFID 989 (1576)
Q Consensus 913 aSGgs~GydHK~mGITarGaw~~v~rhfrelg~-D~q~~~fTvvgiGdmsGDVfGNg--mLls~~i~lvaafdh~hif~D 989 (1576)
..|||.|- -..|++|++.+++.-++..|. +...-.+-+-|.| -|.+.- .|.....|++++ |
T Consensus 142 ~~gg~~~~----~~aTg~Gv~~~~~~~~~~~g~~~l~g~~VaIQGfG----nVG~~~a~~L~~~Ga~vv~~--------d 205 (355)
T 1c1d_A 142 ERGGAGSS----AFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLG----AVGGSLASLAAEAGAQLLVA--------D 205 (355)
T ss_dssp GGTSCCCC----HHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCS----HHHHHHHHHHHHTTCEEEEE--------C
T ss_pred CCCCCCCC----CCCEEEEEEEEHHHHHHHCCCCCCCCCEEEEECCC----HHHHHHHHHHHHHCCEEEEC--------C
T ss_conf 35898887----76135778872278998728998668779998134----36789998899729898741--------5
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEC
Q ss_conf 77881379899999996689870038978717897089821444217989998709885542888999863036530443
Q gi|254780662|r 990 PDPNSETTFDERKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLW 1069 (1576)
Q Consensus 990 P~PD~~~s~~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw 1069 (1576)
.+ . .-..+.-. +....+++++ +|..|+|+|.
T Consensus 206 ~d--~----~~i~~~~~---------------------------------------~~~~~i~~~~----~~~~~~DIli 236 (355)
T 1c1d_A 206 TD--T----ERVAHAVA---------------------------------------LGHTAVALED----VLSTPCDVFA 236 (355)
T ss_dssp SC--H----HHHHHHHH---------------------------------------TTCEECCGGG----GGGCCCSEEE
T ss_pred CC--H----HHHHHHHH---------------------------------------CCCCCCCHHH----CCCCCCEEEE
T ss_conf 77--8----87535675---------------------------------------2983025545----0632631897
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHH-HHHHHHHCCCEEECCCCCCCCCCCCCCHHH
Q ss_conf 3874211126898620015210000002588304689985551030767-899999739868353313443732440476
Q gi|254780662|r 1070 FGGIGTYIRAPRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQ-ARVVYSLNGGRINSDAIDNSGGVNCSDLEV 1148 (1576)
Q Consensus 1070 ~gGiGTYvka~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~-~Rie~a~~Gg~intDaidNsaGV~~Sd~EV 1148 (1576)
+|- .+.-. ..+ |...++||+|+||||--+|+. +--.+..+|+.+.+|++.|+|||+++..|-
T Consensus 237 PcA--------~~~~I-~~~--------~a~~i~akiI~e~AN~p~t~~~a~~iL~~rgI~viPD~laNAGGVi~~~~~~ 299 (355)
T 1c1d_A 237 PCA--------MGGVI-TTE--------VARTLDCSVVAGAANNVIADEAASDILHARGILYAPDFVANAGGAIHLVGRE 299 (355)
T ss_dssp ECS--------CSCCB-CHH--------HHHHCCCSEECCSCTTCBCSHHHHHHHHHTTCEECCHHHHTTHHHHHHHHHH
T ss_pred ECC--------CCCCC-CHH--------HHHHCCCEEEEECCCCCCCCHHHHHHHHHCCEEEECCCEEECCCHHHHHHHH
T ss_conf 655--------44765-888--------8954796199526889999978999999799199881105576136677677
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 799986588770798988998899987899
Q gi|254780662|r 1149 NIKIALASAMRDGRLTLENRNKLLSSMTSE 1178 (1576)
Q Consensus 1149 niKIll~~~~~~g~lt~~~Rn~lL~~mtde 1178 (1576)
....+.++-++.+..|.+-
T Consensus 300 -----------~~~w~~~~v~~~~~~i~~~ 318 (355)
T 1c1d_A 300 -----------VLGWSESVVHERAVAIGDT 318 (355)
T ss_dssp -----------TTCCCHHHHHHHHHTHHHH
T ss_pred -----------HHCCCHHHHHHHHHHHHHH
T ss_conf -----------6168999999999999999