HHsearch results for GI: 254780662 and protein with PDBid: 2bma_A
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=99.85 E-value=1.7e-18 Score=179.43 Aligned_cols=321 Identities=18% Similarity=0.189 Sum_probs=218.5
Q ss_pred EEEEEEECCC---CCCCEEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 5799840542---3304042008857888889998998453287--4288875327871689988998999999999999
Q gi|254780662|r 774 VEGVHLRCGK---IARGGLRWSDRAADYRTEVLGLVRAQKVKNA--VIVPVGAKGGFYPKRLPSEGRRDEIIKIGREAYK 848 (1576)
Q Consensus 774 ~eGvHlR~g~---vARGGlRwSdR~edfrtEvlgL~kaQ~vKN~--vIvp~GaKGgfv~k~~~~~~~r~~~~~e~~~~y~ 848 (1576)
|.|+...+.. -+.||||+.-.. -..||+.|+..|..||+ .||-||+|||..+. |..-+.. |..+-.+
T Consensus 97 ~~GyRvqhn~alGP~kGGiRfhp~v--~l~evk~La~~MT~KnAl~gLP~GGgKGGi~~d--Pk~~s~~----E~~r~~r 168 (470)
T 2bma_A 97 NRCFRVQYNSALGPYKGGLRFHPSV--NLSIVKFLGFEQIFKNSLTGLSMGGGKGGSDFD--PKGKSDN----EILKFCQ 168 (470)
T ss_dssp EEEEEEEEECSSSSEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTCSSCEEEEEEESCC--CTTCCHH----HHHHHHH
T ss_pred EEEEEEEECCCCCCCCCCEECCCCC--CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC--CCCCCHH----HHHHHHH
T ss_conf 8689999779878876725437989--999999999999999986089977723599528--9999989----9999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH-HHHHH-HHHHHHCCCCCCCHHCCCCCC--CCCCCC
Q ss_conf 99989887762568884028831030538986799817788832-68999-999988089985011056999--988431
Q gi|254780662|r 849 TYVRALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT-FSDTA-NILAQEAKFWLDDAFASGGSM--GYDHKK 924 (1576)
Q Consensus 849 ~fi~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~-fsD~A-n~ia~~~gfwlgdAFaSGgs~--GydHK~ 924 (1576)
.|++.|-.. -|.|.| |-|+|-||.. -+.|. -..++-.++|-| .-+|++. |-..-.
T Consensus 169 ~~~~el~~~------------------iGp~~d-ipA~Dvgt~~~em~~~~~~y~~~~~~~~g--~~TGkp~~~GGs~~r 227 (470)
T 2bma_A 169 AFMNELYRH------------------IGPCTD-VPAGDIGVGGREIGYLYGQYKKIVNSFNG--TLTGKNVKWGGSNLR 227 (470)
T ss_dssp HHHHHHGGG------------------CBTTTE-EEECCSSCCHHHHHHHHHHHHHHHCCCSC--SSSSCCGGGTCCTTT
T ss_pred HHHHHHHHC------------------CCCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCCCC--EECCCCHHHCCCCCC
T ss_conf 999875111------------------587655-06777786699999999988641477653--435887442799998
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHH--CCCCCEEEEEECCCEEEECCCCCCCCCHHHHH
Q ss_conf 0114678999999999980899654864599605886332443111--27662089997394368677788137989999
Q gi|254780662|r 925 MGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGML--LSRKIQLVAAFDHSDIFIDPDPNSETTFDERK 1002 (1576)
Q Consensus 925 mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgmL--ls~~i~lvaafdh~hif~DP~PD~~~s~~Er~ 1002 (1576)
...|.+|+..+++.-++.+|.+++.. ||+--| +|.|..+.+. .-...|+||..|..+..+||+ |.+.++..
T Consensus 228 ~~ATG~Gv~~~~~~~l~~~~~~l~gk--~vaIqG--fGnVG~~aa~~L~e~GakVVavSD~~G~iy~~~---Gld~~~l~ 300 (470)
T 2bma_A 228 VEATGYGLVYFVLEVLKSLNIPVEKQ--TAVVSG--SGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPN---GFTHENLE 300 (470)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCGGGC--EEEEEC--SSHHHHHHHHHHHHTTCEECEEEETTEEEECSS---CCCHHHHH
T ss_pred CEEEEEEEHHHHHHHHHHCCCCCCCC--EEEEEC--CCCHHHHHHHHHHHCCCEEEEEECCCCEEECCC---CCCHHHHH
T ss_conf 70689863899999998554685678--899977--773689999999974976999986887388887---78989999
Q ss_pred HHHHCCCC---CCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECC
Q ss_conf 99966898---700389787178970898214442179899987098855428889998630365304433874211126
Q gi|254780662|r 1003 RLFDSPSS---SWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGTYIRA 1079 (1576)
Q Consensus 1003 RLf~lprs---sw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGTYvka 1079 (1576)
+|.+..++ ...+|... ..+. ..++++ .++..|+|+| +||
T Consensus 301 ~l~~~~~~~~~~~~~~~~~---~~~~-----------------------~~~~~~----~~~~~~~DIl--------iPc 342 (470)
T 2bma_A 301 FLIDLKEEKKGRIKEYLNH---SSTA-----------------------KYFPNE----KPWGVPCTLA--------FPC 342 (470)
T ss_dssp HHHHHHTTTTCCGGGGGGT---CSSC-----------------------EECSSC----CTTSSCCSEE--------EEC
T ss_pred HHHHHHHHCCCEECCCCCC---CCCC-----------------------EECCCC----CCCCCCCEEE--------ECC
T ss_conf 9999875426532112034---7875-----------------------673886----4467687388--------136
Q ss_pred CCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 89862001521000000258830468998555103076789999973986835331344373244047679998658877
Q gi|254780662|r 1080 PRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIKIALASAMR 1159 (1576)
Q Consensus 1080 ~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniKIll~~~~~ 1159 (1576)
..+... ..+.+. .++.+| ||+|+||+|..+|+.|.-.|..+|+.+..|.+.|+|||.+|-+|- .+-..
T Consensus 343 A~~n~I-~~~~a~-~l~~~g----~~ii~EgAN~P~T~eA~~iL~~rGIlv~PD~~ANAGGVivSylE~------~Qn~~ 410 (470)
T 2bma_A 343 ATQNDV-DLDQAK-LLQKNG----CILVGEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLEM------SQNFQ 410 (470)
T ss_dssp SSTTCB-CSHHHH-HHHHTT----CCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHH------HHHHT
T ss_pred CCCCCC-CHHHHH-HHHHCC----CEEEECCCCCCCCHHHHHHHHHCCCEEECHHHEECCHHHHHHHHH------HHHHH
T ss_conf 565320-277898-998739----789963689999846899999889599771451573033318899------98641
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q ss_conf 079898899889998789999
Q gi|254780662|r 1160 DGRLTLENRNKLLSSMTSEVV 1180 (1576)
Q Consensus 1160 ~g~lt~~~Rn~lL~~mtdeV~ 1180 (1576)
.-.-+.++=++-|.++..+.-
T Consensus 411 ~~~w~~eeV~~kL~~im~~i~ 431 (470)
T 2bma_A 411 FSHWTRETVDEKLKEIMRNIF 431 (470)
T ss_dssp TCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH
T ss_conf 268899999999999999999