HHsearch results for GI: 254780662 and protein with PDBid: 3k92_A
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=99.91 E-value=2.3e-21 Score=204.81 Aligned_cols=307 Identities=20% Similarity=0.207 Sum_probs=221.8
Q ss_pred CEEEEEEECCCC---CCCEEEEE-CCHHHHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 657998405423---30404200-8857888889998998453287--42888753278716899889989999999999
Q gi|254780662|r 773 EVEGVHLRCGKI---ARGGLRWS-DRAADYRTEVLGLVRAQKVKNA--VIVPVGAKGGFYPKRLPSEGRRDEIIKIGREA 846 (1576)
Q Consensus 773 ~~eGvHlR~g~v---ARGGlRwS-dR~edfrtEvlgL~kaQ~vKN~--vIvp~GaKGgfv~k~~~~~~~r~~~~~e~~~~ 846 (1576)
-|.|++...... |.||+|+. .-.+ .||+.|++++..||+ .||-||+|||+.+. |...++.+ -.+-
T Consensus 64 ~~~gyrv~H~~~lGPakGG~R~~p~~~~---~ev~~LA~~MT~K~Ala~lp~GGgKggI~~d--P~~~s~~e----ler~ 134 (424)
T 3k92_A 64 VFTGYRSQHNDAVGPTKGGVRFHPEVNE---EKVKALSIWMTLKCGIANLPYGGGKGGIICD--PRTMSFGE----LERL 134 (424)
T ss_dssp EEEEEEEECCCSSSSEECCEEEETTCCH---HHHHHHHHHHHHHHHHTTCSCEEEEEEEECC--GGGSCHHH----HHHH
T ss_pred EEEEEEEEECCCCCCCCCCEEECCCCCH---HHHHHHHHHHHHHHHHCCCCCCCCCEEEECC--CCCCCHHH----HHHH
T ss_conf 9978999976887888762660598999---9999999987788750799988856688249--87799799----9999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCH-HHHHHH-HHHHHCCCCCCCHHCCCCC--CCCCC
Q ss_conf 9999989887762568884028831030538986799817788832-689999-9998808998501105699--99884
Q gi|254780662|r 847 YKTYVRALLSITDNFEGQEIIHPDNTVCLDGNDPYFVVAADKGTAT-FSDTAN-ILAQEAKFWLDDAFASGGS--MGYDH 922 (1576)
Q Consensus 847 y~~fi~~lLditDN~~~g~vv~p~~vv~~d~~d~ylvvaaDkgTa~-fsD~An-~ia~~~gfwlgdAFaSGgs--~GydH 922 (1576)
.+.|++.+-.+ -|.+.| +.|||-||-. .++|.- ..+.-+|++-+ ++.+|++ .|-.+
T Consensus 135 ~r~~~~~l~~~------------------ig~~~d-i~apDvgt~~~~m~~~~d~~~~~~~~~~~-~~vtGkp~~~Ggs~ 194 (424)
T 3k92_A 135 SRGYVRAISQI------------------VGPTKD-IPAPDVYTNSQIMAWMMDEYSRLREFDSP-GFITGKPLVLGGSQ 194 (424)
T ss_dssp HHHHHHHHGGG------------------CBTTTE-ECCBCTTCCHHHHHHHHHHHHHHHTSCCG-GGCSSCCGGGTCCT
T ss_pred HHHHHHHHHHC------------------CCCCCE-ECCCCCCCCHHHHCCHHHHHHHHHCCCCC-CEECCCCCCCCCCC
T ss_conf 99999999753------------------698514-77776665755502025330021023355-41158875468888
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHH--HCCCCCEEEEEECCCEEEECCCCCCCCCHHH
Q ss_conf 31011467899999999998089965486459960588633244311--1276620899973943686777881379899
Q gi|254780662|r 923 KKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGM--LLSRKIQLVAAFDHSDIFIDPDPNSETTFDE 1000 (1576)
Q Consensus 923 K~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgm--Lls~~i~lvaafdh~hif~DP~PD~~~s~~E 1000 (1576)
...+.|++|+..+++..++..|.+++...|.+-|.| .|.++-. |.-...|+|+.-|+.+-.+||+ +++..+
T Consensus 195 ~~~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIQG~G----nVG~~~a~~L~~~GakvvavsD~~G~i~~~~---Gldv~~ 267 (424)
T 3k92_A 195 GRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFG----NAGSFLAKFMHDAGAKVIGISDANGGLYNPD---GLDIPY 267 (424)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCS----HHHHHHHHHHHHHTCEEEEEECSSCEEECTT---CCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC----CHHHHHHHHHHHCCCEEEEEECCCCCEEECC---CCCHHH
T ss_conf 856772067889999988745998688779997157----2689999999876997999986997387046---635689
Q ss_pred HHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCC
Q ss_conf 99999668987003897871789708982144421798999870988554288899986303653044338742111268
Q gi|254780662|r 1001 RKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFGGIGTYIRAP 1080 (1576)
Q Consensus 1001 r~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~gGiGTYvka~ 1080 (1576)
+.+..+.- .+-.+|. ...+++++ ++..++|+|.+|.+|--|
T Consensus 268 L~~~~~~~-~~~~~~~-------------------------------~~~v~~~e----i~~~~~DIliPcAl~~~I--- 308 (424)
T 3k92_A 268 LLDKRDSF-GMVTNLF-------------------------------TDVITNEE----LLEKDCDILVPAAISNQI--- 308 (424)
T ss_dssp HHHHCCSS-SCCGGGC-------------------------------SCCBCHHH----HHHSCCSEEEECSCSSCB---
T ss_pred HHHHHHHH-CCCCCCC-------------------------------CEEECCHH----HHCCCCCEEEECCCCCCC---
T ss_conf 99999852-8602445-------------------------------31204366----624777588323433546---
Q ss_pred CCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 98620015210000002588304689985551030767899999739868353313443732440476799986588770
Q gi|254780662|r 1081 RENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIKIALASAMRD 1160 (1576)
Q Consensus 1081 ~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniKIll~~~~~~ 1160 (1576)
..+ |...++||+|+||||-.+|+.+.-.+..+|+.+.+|++.|+|||++|-+|- .-| ...
T Consensus 309 ------~~~--------na~~l~akiIvegAN~p~t~ea~~iL~~rGI~~iPD~laNaGGVivSy~Ew----~qn--~~~ 368 (424)
T 3k92_A 309 ------TAK--------NAHNIQASIVVERANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEW----VQN--NQG 368 (424)
T ss_dssp ------CTT--------TGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHH----HHH--HHT
T ss_pred ------CHH--------HHHHCCCCEEECCCCCCCCHHHHHHHHHCCEEEECHHHHCCCCHHHHHHHH----HHC--CCC
T ss_conf ------788--------897506788992489999862799998399799785886385188889999----730--245
Q ss_pred CCCCHHHHHHHHHH
Q ss_conf 79898899889998
Q gi|254780662|r 1161 GRLTLENRNKLLSS 1174 (1576)
Q Consensus 1161 g~lt~~~Rn~lL~~ 1174 (1576)
-..+.++=++-|..
T Consensus 369 ~~w~~e~V~~~l~~ 382 (424)
T 3k92_A 369 YYWSEEEVAEKLRS 382 (424)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
T ss_conf 78899999999999