HHSEARCH alignment of GI: 254780662 and SCOP domain: d1gtma1

Alignment
>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.34  E-value=2.4e-11  Score=113.91  Aligned_cols=196  Identities=29%  Similarity=0.275  Sum_probs=141.7

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHH-HCC-C-CCEEEEEECCCEEEECCC
Q ss_conf             6999988431011467899999999998089965486459960588633244311-127-6-620899973943686777
Q gi|254780662|r  915 GGSMGYDHKKMGITARGAWETVKRHFREMDIDIQSTPFTVAGVGDMSGDVFGNGM-LLS-R-KIQLVAAFDHSDIFIDPD  991 (1576)
Q Consensus       915 Ggs~GydHK~mGITarGaw~~v~rhfrelg~D~q~~~fTvvgiGdmsGDVfGNgm-Lls-~-~i~lvaafdh~hif~DP~  991 (1576)
                      |||.|-+    .=|++|++.+++.-.+.+|.|. -+.-||+--|=  |.|.++-. +|. + -.|+|+..|+.+..++|+
T Consensus         1 GGs~gR~----eATg~Gv~~~~~~~~~~~g~~~-l~g~~v~IqGf--GnVG~~~a~~L~~~~G~kvv~vsD~~g~i~~~~   73 (239)
T d1gtma1           1 GGSLGRI----EATARGASYTIREAAKVLGWDT-LKGKTIAIQGY--GNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPD   73 (239)
T ss_dssp             TCCTTTT----THHHHHHHHHHHHHHHHTTCSC-STTCEEEEECC--SHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEE
T ss_pred             CCCCCCC----CHHHHHHHHHHHHHHHHHCCCC-CCCCEEEEECC--CHHHHHHHHHHHHHCCCCEEECCCCCCCEECCC
T ss_conf             9988874----0646999999999999719997-68999999798--899999999999836720020013655164377


Q ss_pred             CCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCC
Q ss_conf             88137989999999668987003897871789708982144421798999870988554288899986303653044338
Q gi|254780662|r  992 PNSETTFDERKRLFDSPSSSWQDFDRKVLSKGGMIISRKEKAVQLTPEAVAVIGISKQIATPSEIISAILMASVDLLWFG 1071 (1576)
Q Consensus       992 PD~~~s~~Er~RLf~lprssw~dyd~~liS~gGgv~~r~~k~i~ls~~~~~~l~~~~~~~~p~eli~~iL~a~vDLlw~g 1071 (1576)
                         +.+..+..+.+... .+..+|+      |+                        ..+++++    ++..|+|.|.+|
T Consensus        74 ---G~d~~~l~~~~~~~-~~~~~~~------~~------------------------~~~~~~~----i~~~~~DIl~Pc  115 (239)
T d1gtma1          74 ---GLNADEVLKWKNEH-GSVKDFP------GA------------------------TNITNEE----LLELEVDVLAPA  115 (239)
T ss_dssp             ---EECHHHHHHHHHHH-SSSTTCT------TS------------------------EEECHHH----HHHSCCSEEEEC
T ss_pred             ---CCCHHHHHHHHHHC-CCCCCCC------CC------------------------EEECCCC----CCCCCCCEEEEC
T ss_conf             ---68889999998722-6554578------87------------------------3550232----111554577303


Q ss_pred             CCCCEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHH
Q ss_conf             74211126898620015210000002588304689985551030767899999739868353313443732440476799
Q gi|254780662|r 1072 GIGTYIRAPRENNADIGDKGNNILRVTADKVRAKVIGEGANLGLTQQARVVYSLNGGRINSDAIDNSGGVNCSDLEVNIK 1151 (1576)
Q Consensus      1072 GiGTYvka~~e~~~~vgd~and~~rv~g~~lr~kvi~EG~NLg~Tq~~Rie~a~~Gg~intDaidNsaGV~~Sd~EVniK 1151 (1576)
                      .+|-         ....+        |...++||+|+||+|--+|+.+.-.+..+|+.+.+|++.|+|||.+|-+|..  
T Consensus       116 A~~~---------~I~~~--------~a~~i~ak~I~e~AN~p~t~ea~~~L~~rgI~~iPD~~aNAGGVi~s~~E~~--  176 (239)
T d1gtma1         116 AIEE---------VITKK--------NADNIKAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWV--  176 (239)
T ss_dssp             SCSC---------CBCTT--------GGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHH--
T ss_pred             CCCC---------CCCHH--------HHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEECCHHHCCCCEEEEEEEEC--
T ss_conf             3104---------44498--------8873445478724789898789999997898794603307763267633201--


Q ss_pred             HHHHHHHHCCCCCHHHHHHHH-HHHHHH
Q ss_conf             986588770798988998899-987899
Q gi|254780662|r 1152 IALASAMRDGRLTLENRNKLL-SSMTSE 1178 (1576)
Q Consensus      1152 Ill~~~~~~g~lt~~~Rn~lL-~~mtde 1178 (1576)
                          +-...-..+.++-++-| ..|.+-
T Consensus       177 ----qn~~~~~w~~~~v~~~l~~~m~~~  200 (239)
T d1gtma1         177 ----QNITGYYWTIEEVRERLDKKMTKA  200 (239)
T ss_dssp             ----HHHHCCCCCHHHHHHHHHHHHHHH
T ss_pred             ----CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             ----343112365999999999999999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]