HHsearch alignment for GI: 254780663 and conserved domain: cd00382
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=100.00 E-value=6e-41 Score=285.92 Aligned_cols=119 Identities=47% Similarity=0.859 Sum_probs=112.4
Q ss_pred CCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
Q ss_conf 99759999626789988885178866248886242234577777530257888776722057668999815853898875
Q gi|254780663|r 32 QKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAV 111 (207)
Q Consensus 32 q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa 111 (207)
T Consensus 1 Q~P~~~vi~C~DSRv~p~~i~~~~~Gd~fv~Rn~Gn~v~~~-----d~~~~~sleyav~~L~v~~IvV~GHt~CG~v~a- 74 (119)
T cd00382 1 QKPKALIIGCSDSRVPPELIFGLGPGDLFVVRNAGNLVPPY-----DLDVLASLEYAVEVLGVKHIIVCGHTDCGAVKA- 74 (119)
T ss_pred CCCCEEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCC-----CCEEEEEHHHHHHHCCCCEEEEECCCCCHHHHH-
T ss_conf 99848999886789898998099997589997045400678-----731675312688855998899968987518889-
Q ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCE
Q ss_conf 30000134633101468988889999864016324687999999999999973097889999779967999999889876
Q gi|254780663|r 112 LDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIHGAWFDISSGK 191 (207)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~G~~yDi~tG~ 191 (207)
T Consensus 75 ---------------------------------------~~~~nV~~qv~~L~~~p~i~~~~~~~~l~v~G~~ydi~tG~ 115 (119)
T cd00382 75 ---------------------------------------LVEENVREQVENLRSHPLIQEAVAPGELKVHGWVYDIETGK 115 (119)
T ss_pred ---------------------------------------HHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCE
T ss_conf ---------------------------------------99999999999998098899998789958999999879977
Q ss_pred EEEE
Q ss_conf 9998
Q gi|254780663|r 192 LWIL 195 (207)
Q Consensus 192 v~~l 195 (207)
T Consensus 116 v~~l 119 (119)
T cd00382 116 LEVL 119 (119)
T ss_pred EEEC
T ss_conf 9869