Query         gi|254780663|ref|YP_003065076.1| carbonate dehydratase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 207
No_of_seqs    125 out of 2127
Neff          7.8 
Searched_HMMs 33803
Date          Wed Jun  1 15:25:34 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780663.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >1ym3_A Carbonic anhydrase (ca 100.0       0       0  345.9  18.7  193    3-204    16-214 (215)
  2 >1ekj_A Beta-carbonic anhydras 100.0       0       0  330.8  19.5  172   33-205     1-176 (178)
  3 >3eyx_A Carbonic anhydrase; ro 100.0       0       0  324.1  18.0  169   29-203     2-177 (178)
  4 >1i6p_A Carbonic anhydrase; me 100.0       0       0  322.5  17.9  173   26-204     1-174 (194)
  5 >3e3i_A Carbonic anhydrase 2,  100.0       0       0  318.8  17.2  171   28-204     1-172 (201)
  6 >1ddz_A Carbonic anhydrase; al 100.0 1.4E-45       0  316.3  16.7  166   34-205     1-168 (254)
  7 >2w3q_A Carbonic anhydrase 2;  100.0 1.4E-44       0  309.1  17.4  167   33-205     1-173 (180)
  8 >1ylk_A Hypothetical protein R 100.0 3.9E-40 1.1E-44  280.3   8.4  139   31-197     2-140 (140)
  9 >1g5c_A Beta-carbonic anhydras 100.0 1.8E-39 5.2E-44  276.0   8.0  149   29-199     2-152 (152)
 10 >1ddz_A Carbonic anhydrase; al 100.0 6.9E-29 2.1E-33  207.2  19.1  182    7-198    38-227 (242)
 11 >2hwk_A Helicase NSP2; rossman  78.4     1.9 5.7E-05   22.6   3.0   36  159-200     4-40  (49)
 12 >3gcf_A Terminal oxygenase com  51.8     7.2 0.00021   18.9   1.6   15  181-195    13-27  (37)
 13 >1gxu_A Hydrogenase maturation  50.1     7.1 0.00021   18.9   1.3   27  177-203    32-58  (91)
 14 >2bjd_A Acylphosphatase; hyper  49.3      15 0.00044   16.8   2.8   19  177-195    39-57  (101)
 15 >1ctt_A Cytidine deaminase; hy  47.0      19 0.00055   16.2   4.2   66   52-117    42-112 (121)
 16 >3d89_A Rieske domain-containi  46.8     9.6 0.00028   18.0   1.6   26  179-204    21-48  (57)
 17 >1wm1_A Proline iminopeptidase  46.7      19 0.00056   16.1   4.1   82   32-113    36-123 (209)
 18 >2fhm_A Probable acylphosphata  44.0      20 0.00059   16.0   2.8   19  177-195    27-45  (91)
 19 >2hu5_A Acylamino-acid-releasi  43.7      21 0.00062   15.8   3.5   36   78-113   118-153 (280)
 20 >1fqt_A Rieske-type ferredoxin  42.8     7.2 0.00021   18.9   0.4   17  179-195    52-68  (72)
 21 >2z72_A Protein-tyrosine-phosp  42.6      16 0.00047   16.6   2.2   31   82-113    72-102 (113)
 22 >3dqy_A Toluene 1,2-dioxygenas  42.2     7.5 0.00022   18.8   0.4   16  179-194    51-66  (71)
 23 >2qpz_A Naphthalene 1,2-dioxyg  40.4     6.9  0.0002   19.0   0.0   17  179-195    51-67  (71)
 24 >1urr_A CG18505 protein; acylp  40.1      21 0.00062   15.8   2.5   19  177-195    36-54  (102)
 25 >2de6_D Ferredoxin component o  39.8     7.7 0.00023   18.7   0.2   17  179-195    17-33  (37)
 26 >2de6_A Terminal oxygenase com  39.6      13 0.00037   17.3   1.3   20  178-197    90-109 (147)
 27 >2vh7_A Acylphosphatase-1; hyd  37.6      26 0.00077   15.2   2.8   22  177-198    33-55  (99)
 28 >2i7f_A Ferredoxin component o  37.4     5.3 0.00016   19.7  -0.9   16  179-194    17-32  (38)
 29 >2fuk_A XC6422 protein; A/B hy  37.2      26 0.00078   15.2   4.0   52   62-113    77-129 (220)
 30 >1w2i_A Acylphosphatase; hydro  35.5      28 0.00082   15.1   2.5   19  177-195    29-47  (91)
 31 >2e87_A Hypothetical protein P  35.2      19 0.00055   16.2   1.6   10   35-44      7-16  (195)
 32 >2c78_A Elongation factor TU-A  34.1      15 0.00046   16.7   1.0   58   34-99     75-133 (215)
 33 >1aps_A Acylphosphatase; hydro  33.5      26 0.00077   15.2   2.1   19  177-195    32-50  (98)
 34 >2rdo_7 EF-G, elongation facto  32.9      17  0.0005   16.5   1.0   49   48-106    97-147 (289)
 35 >1ulr_A Putative acylphosphata  32.1      32 0.00094   14.7   2.8   19  177-195    27-45  (88)
 36 >2q0x_A Protein DUF1749, uncha  31.3      33 0.00097   14.6   3.1   83   30-112    35-125 (335)
 37 >2vtv_A PHB depolymerase PHAZ7  31.2      33 0.00097   14.6   3.1   35   79-113    98-132 (281)
 38 >1j1i_A META cleavage compound  30.6      34   0.001   14.5   3.6   84   30-113    33-124 (296)
 39 >1ega_A Protein (GTP-binding p  30.5      17 0.00051   16.4   0.7   13   94-106     8-20  (181)
 40 >2ojh_A Uncharacterized protei  30.5      34   0.001   14.5   2.8   29  176-204    18-46  (99)
 41 >1zo1_I IF2, translation initi  30.4      21 0.00061   15.9   1.1   24   83-106    93-116 (170)
 42 >2gv1_A Probable acylphosphata  29.9      19 0.00057   16.1   0.9   19  177-195    29-47  (92)
 43 >2wj6_A 1H-3-hydroxy-4-oxoquin  29.1      36  0.0011   14.3   3.9   81   31-112    25-110 (207)
 44 >2hf9_A Probable hydrogenase n  28.8      25 0.00074   15.3   1.3   16   31-46     36-51  (226)
 45 >1zo0_A ODC-AZ, ornithine deca  28.6      36  0.0011   14.3   2.2   69   40-113    23-95  (126)
 46 >3bdi_A Uncharacterized protei  28.2      37  0.0011   14.2   3.6   36   78-113    83-118 (207)
 47 >1e8c_A UDP-N-acetylmuramoylal  28.1      23 0.00069   15.5   1.1   19   39-64     23-41  (90)
 48 >2aiz_P Outer membrane protein  27.0      37  0.0011   14.3   1.9   31   77-107    44-74  (134)
 49 >3a4m_A L-seryl-tRNA(SEC) kina  26.8      24 0.00072   15.4   1.0   15   93-107     3-17  (182)
 50 >1z68_A Fibroblast activation   26.7      23 0.00068   15.6   0.8   17  181-197    34-50  (51)
 51 >3def_A T7I23.11 protein; chlo  26.4      26 0.00078   15.2   1.1   15   31-45     34-48  (262)
 52 >2h5e_A Peptide chain release   25.9      27 0.00081   15.1   1.1   21   84-104   125-145 (207)
 53 >2w3q_A Carbonic anhydrase 2;   25.8      41  0.0012   14.0   2.4   27    6-32     35-63  (63)
 54 >3iby_A Ferrous iron transport  25.6      31 0.00093   14.7   1.4   11   96-106     3-13  (173)
 55 >1znw_A Guanylate kinase, GMP   25.3      33 0.00098   14.6   1.4   20   89-108    15-34  (155)
 56 >1zun_B Sulfate adenylate tran  24.8      30 0.00088   14.9   1.1   12   35-46     26-37  (238)
 57 >2k1s_A Inner membrane lipopro  24.7      43  0.0013   13.8   2.9   29   79-107    50-78  (149)
 58 >1orv_A Dipeptidyl peptidase I  24.4      27  0.0008   15.1   0.8   17  181-197    36-52  (53)
 59 >1ukf_A Avirulence protein AVR  24.3      43  0.0013   13.8   3.4   27  181-207   132-158 (188)
 60 >2hjg_A GTP-binding protein EN  24.2      34   0.001   14.5   1.3   15   93-107     2-16  (167)
 61 >2hqs_H Peptidoglycan-associat  23.8      44  0.0013   13.7   3.7   33   75-107    18-50  (118)
 62 >3a1s_A Iron(II) transport pro  23.6      28 0.00082   15.0   0.8   11   96-106     7-17  (173)
 63 >1n0u_A EF-2, elongation facto  23.3      31 0.00093   14.7   1.0   66   32-107    96-164 (304)
 64 >2r11_A Carboxylesterase NP; 2  23.2      46  0.0013   13.6   3.7   56   58-113    95-152 (306)
 65 >2zf8_A MOTY, component of sod  22.8      46  0.0014   13.6   3.4   15   93-107    39-53  (124)
 66 >1k1x_A 4-alpha-glucanotransfe  22.3      33 0.00098   14.5   1.0   86   95-191     4-91  (175)
 67 >1dar_A EF-G, elongation facto  22.1      33 0.00098   14.6   0.9   65   33-107    76-143 (283)
 68 >2hjg_A GTP-binding protein EN  22.0      36  0.0011   14.3   1.1   11   96-106    10-20  (186)
 69 >2wji_A Ferrous iron transport  22.0      36  0.0011   14.3   1.1   12   95-106     4-15  (165)
 70 >2qtf_A Protein HFLX, GTP-bind  21.9      40  0.0012   14.0   1.3   12   34-45      9-20  (193)
 71 >1kez_A Erythronolide synthase  21.6      49  0.0014   13.5   3.5   36   78-113   117-152 (300)
 72 >3kb5_A Tripartite motif-conta  21.4      49  0.0015   13.4   4.3   24  177-200   132-155 (193)
 73 >2dy1_A Elongation factor G; t  21.3      38  0.0011   14.1   1.1   13   36-48    102-114 (277)
 74 >3b60_A Lipid A export ATP-bin  21.3      43  0.0013   13.8   1.4  106   90-198    34-161 (181)
 75 >3iev_A GTP-binding protein ER  20.5      35   0.001   14.4   0.8   25   82-106   111-135 (204)
 76 >2gj8_A MNME, tRNA modificatio  20.4      43  0.0013   13.8   1.2   14   94-107     4-17  (172)
 77 >1gg4_A UDP-N-acetylmuramoylal  20.3      40  0.0012   14.0   1.1   20   39-65     26-45  (81)
 78 >1tq4_A IIGP1, interferon-indu  20.1      45  0.0013   13.7   1.3   62   34-105    52-119 (197)
 79 >1l2t_A Hypothetical ABC trans  20.0      44  0.0013   13.7   1.2   16   92-107    29-44  (235)

No 1  
>>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbonic dehydratase); Zn protein, structural proteomics in europe, spine; 1.75A {Mycobacterium tuberculosis H37RV} PDB: 2a5v_A (A:)
Probab=100.00  E-value=0  Score=345.86  Aligned_cols=193  Identities=28%  Similarity=0.421  Sum_probs=170.2

Q ss_pred             HHHHHHHHHHHHHHHCCC-----CHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             469999999999970687-----988999862389975999962678998888517886624888624223457777753
Q gi|254780663|r    3 SFPNTLLERHREFIQDQY-----DKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQ   77 (207)
Q Consensus         3 ~~~~~Ll~~N~~f~~~~~-----~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~   77 (207)
                      +-+++|++||++|++++.     .+++|+.|++||+|+++||||||||++||.+||++|||+||+||+||+|        
T Consensus        16 ~~l~~ll~gN~~f~~~~~~~~~~~~~~~~~l~~gq~P~~~vi~CsDsRv~pe~i~~~~~GdlfvvRn~Gn~v--------   87 (215)
T 1ym3_A           16 AAWKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVI--------   87 (215)
T ss_dssp             HHHHHHHHHHHHHHHTCCSSGGGC----------CCCSEEEEEETTCSSCHHHHTTCCTTSEEEEEEGGGCC--------
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEECCCCC--------
T ss_conf             999999999999983975685438899987415899836999405778787773389987468983043446--------


Q ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             02578887767220576689998158538988753000013463310146898888999986401632468799999999
Q gi|254780663|r   78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIR  157 (207)
Q Consensus        78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~  157 (207)
                      +.++++|||||+.+|+|++|||||||+||||+++++..........+...+....++... .....+.+..+.++++||+
T Consensus        88 ~~~~~asieyav~~L~v~~IvV~GHt~CGav~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~NV~  166 (215)
T 1ym3_A           88 DSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVL-LGRRDGLSRVDEFEQRHVH  166 (215)
T ss_dssp             CHHHHHHHHHHHHTSCCCEEEEEEESSCHHHHHHHHHHHHTSCCSTTHHHHHHHHHHHHH-HHHHTTCCSHHHHHHHHHH
T ss_pred             CHHHHEEEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHH
T ss_conf             843401568864127867899976865068887651012456763226799998605555-3201432243279999999


Q ss_pred             HHHHHHHCC-HHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCEEEE
Q ss_conf             999997309-78899997799679999998898769998468882583
Q gi|254780663|r  158 NSLKNIRNF-PFVNKLEKEHMLQIHGAWFDISSGKLWILDPTSNEFTC  204 (207)
Q Consensus       158 ~~v~~L~~~-p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~~~~F~~  204 (207)
                      .|+++|+++ |++++++++|+|.||||+||++||+|++|+.+++.|+.
T Consensus       167 ~~v~~l~~~~~~~~~~~~~g~l~I~G~~ydi~tG~v~~l~~~~~~~~~  214 (215)
T 1ym3_A          167 ETVAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIGEE  214 (215)
T ss_dssp             HHHHHHHHHCHHHHHHHHHTSCEEEEEEECTTTCCCEEEEEESCCSCC
T ss_pred             HHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCC
T ss_conf             999999746999999998898389999998787079999889865882


No 2  
>>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} (A:44-221)
Probab=100.00  E-value=0  Score=330.82  Aligned_cols=172  Identities=37%  Similarity=0.620  Sum_probs=159.0

Q ss_pred             CCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
Q ss_conf             97599996267899888851788662488862422345777775302578887767220576689998158538988753
Q gi|254780663|r   33 KPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVL  112 (207)
Q Consensus        33 ~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~  112 (207)
                      +|+++||||||||++|+.+||++|||+||+||+||+|||+... .+.++++|||||+.+|++++|+|||||+|||+++++
T Consensus         1 ~P~~~~i~C~DsRv~p~~i~~~~~GdlfvvRN~GN~V~~~~~~-~~~~~~asleyAv~~l~v~~IvV~GHt~Cgav~aa~   79 (178)
T 1ekj_A            1 SPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQA-KYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLL   79 (178)
T ss_dssp             CCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTT-TCHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH
T ss_conf             9987999405889898998099998689987157753876566-651079999999986089779996588871677766


Q ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECC
Q ss_conf             000013463310146898888999986401----6324687999999999999973097889999779967999999889
Q gi|254780663|r  113 DSNNSSTSPGDFIGKWMDIVRPIAQKIVAN----NPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIHGAWFDIS  188 (207)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~G~~yDi~  188 (207)
                      +.........++++.|+..++++.......    ......+.++++||++|+++|++||+|++++++|++.|||||||++
T Consensus        80 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~~qv~~L~~~p~i~~~~~~g~l~IhG~~ydi~  159 (178)
T 1ekj_A           80 SFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFV  159 (178)
T ss_dssp             HCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETT
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEEEECC
T ss_conf             54430476776289999988989999987626999899999999999999999997398899999869849999999888


Q ss_pred             CCEEEEEECCCCEEEEC
Q ss_conf             87699984688825833
Q gi|254780663|r  189 SGKLWILDPTSNEFTCD  205 (207)
Q Consensus       189 tG~v~~l~~~~~~F~~~  205 (207)
                      ||+|++|+.+++.|+..
T Consensus       160 tG~v~~l~~~~~~~~~i  176 (178)
T 1ekj_A          160 KGSFELWGLEFGLSSTF  176 (178)
T ss_dssp             TTEEEEEEECCCCCCCC
T ss_pred             CCEEEEEECCCCCCCCC
T ss_conf             87799983246888777


No 3  
>>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} (A:39-216)
Probab=100.00  E-value=0  Score=324.06  Aligned_cols=169  Identities=27%  Similarity=0.463  Sum_probs=151.6

Q ss_pred             HCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHH
Q ss_conf             23899759999626789988885178866248886242234577777530257888776722057668999815853898
Q gi|254780663|r   29 ANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGI  108 (207)
Q Consensus        29 ~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav  108 (207)
                      ++||+|+++|||||||||| +.+||++|||+||+||+||+|+|.     +.++++|||||+.+|++++|||||||+||||
T Consensus         2 a~gq~P~~~~i~C~DsRvp-e~i~~~~~GdlfvvRn~Gn~v~~~-----~~~~~~sleyav~~l~v~~IvV~GHt~CGav   75 (178)
T 3eyx_A            2 AKGQSPHTLFIGCSDSRYN-ENCLGVLPGEVFTWKNVANICHSE-----DLTLKATLEFAIICLKVNKVIICGHTDCGGI   75 (178)
T ss_dssp             ----CCSEEEEEECCTTCC-GGGGCCCTTSEEEEEEGGGCCCTT-----CHHHHHHHHHHHHTTCCSEEEEEEESSCHHH
T ss_pred             HCCCCCCEEEEECCCCCCC-CCCCCCCCCCEEEEEEECCCCCCC-----CHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf             3689995489940477878-564799986556761024644887-----5325766464420278768999768617788


Q ss_pred             HHHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE
Q ss_conf             8753000013--463310146898888999986401-----632468799999999999997309788999977996799
Q gi|254780663|r  109 QAVLDSNNSS--TSPGDFIGKWMDIVRPIAQKIVAN-----NPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIH  181 (207)
Q Consensus       109 ~aa~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~  181 (207)
                      +++++.....  ....++++.|+..++++.......     .+.++.+.++++||+.|+++|++||+|++++++|+|+||
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NV~~qv~~L~~~p~i~~~~~~g~l~V~  155 (178)
T 3eyx_A           76 KTCLTNQREALPKVNCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGELQVY  155 (178)
T ss_dssp             HHHHTTCGGGTGGGTCHHHHHHTHHHHHHHHHTHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHTTSCEEE
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEE
T ss_conf             87775233057643442147799999999999887501347889999999999999999999759899999986980899


Q ss_pred             EEEEECCCCEEEEEECCCCEEE
Q ss_conf             9999889876999846888258
Q gi|254780663|r  182 GAWFDISSGKLWILDPTSNEFT  203 (207)
Q Consensus       182 G~~yDi~tG~v~~l~~~~~~F~  203 (207)
                      ||+||++||+|++|+++.+.|+
T Consensus       156 G~~yDi~tG~v~~l~~~~~~~~  177 (178)
T 3eyx_A          156 GLLYNVEDGLLQTVSTYTKVTP  177 (178)
T ss_dssp             EEEECTTTCCEEEEEEECSSSC
T ss_pred             EEEEECCCCEEEEECCCCCCCC
T ss_conf             9999889857999778888798


No 4  
>>1i6p_A Carbonic anhydrase; metalloenzyme, zinc coordination, PH- dependent activity, MAD phasing, lyase; 2.00A {Escherichia coli} (A:27-220)
Probab=100.00  E-value=0  Score=322.53  Aligned_cols=173  Identities=30%  Similarity=0.465  Sum_probs=148.2

Q ss_pred             HHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf             98623899759999626789988885178866248886242234577777530257888776722057668999815853
Q gi|254780663|r   26 QELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRC  105 (207)
Q Consensus        26 ~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~C  105 (207)
                      ++|++||+|+++||||||||++|+.+||++|||+||+||+||+|++.     +.++++|||||+.+|++++|||||||+|
T Consensus         1 ~~l~~gq~P~~~vi~C~DsRv~p~~i~~~~~Gd~fv~Rn~Gn~v~~~-----d~~~~~sle~av~~l~v~~ivV~GHt~C   75 (194)
T 1i6p_A            1 EKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHT-----DLNCLSVVQYAVDVLEVEHIIICGHYGC   75 (194)
T ss_dssp             HHHHSCCCCSEEEEEETTCSSCHHHHHCCCTTSEEEEEETTCCCCTT-----CHHHHHHHHHHHHTSCCSEEEEEEETTC
T ss_pred             HHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCC-----CCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             98606899835999863889897884589986367761135656876-----5016899999998628846999279760


Q ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHCCCCEEEEEE
Q ss_conf             898875300001346331014689888899998640163246879999999999999730978899-9977996799999
Q gi|254780663|r  106 GGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNK-LEKEHMLQIHGAW  184 (207)
Q Consensus       106 Gav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~-~v~~g~l~I~G~~  184 (207)
                      |||+++++....... ..+...+...............+.++.+.++++||+.|+++|+++|+|++ ++++|+|.||||+
T Consensus        76 Gav~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NV~~qv~~L~~~p~v~~~~v~~g~l~V~G~~  154 (194)
T 1i6p_A           76 GGVQAAVENPELGLI-NNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWA  154 (194)
T ss_dssp             HHHHHHHHCCCCSTH-HHHHHHHHHHHHHTHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHSHHHHHHHHTTCCCEEEEEE
T ss_pred             HHHHHHHHCCCCCCC-HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEE
T ss_conf             354423321335530-4666665999999864113354678899999999999999987297989999819962899999


Q ss_pred             EECCCCEEEEEECCCCEEEE
Q ss_conf             98898769998468882583
Q gi|254780663|r  185 FDISSGKLWILDPTSNEFTC  204 (207)
Q Consensus       185 yDi~tG~v~~l~~~~~~F~~  204 (207)
                      ||++||+|++|+..++.|+.
T Consensus       155 yDi~tG~v~~l~~~~~~~~~  174 (194)
T 1i6p_A          155 YGIHDGLLRDLDVTATNRET  174 (194)
T ss_dssp             ECTTTCCEEECSCCBSSHHH
T ss_pred             EECCCCEEEEECCCCCCCCC
T ss_conf             98898379984389997130


No 5  
>>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, metal-binding, zinc; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A (A:29-229)
Probab=100.00  E-value=0  Score=318.82  Aligned_cols=171  Identities=29%  Similarity=0.489  Sum_probs=146.0

Q ss_pred             HHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             62389975999962678998888517886624888624223457777753025788877672205766899981585389
Q gi|254780663|r   28 LANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG  107 (207)
Q Consensus        28 l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa  107 (207)
                      |++||+|+++||||||||++|+.+||++|||+||+||+||+|+|.     +.++++|||||+..|++++|||||||+|||
T Consensus         1 L~~gQ~P~~~vitC~DsRv~pe~i~~~~~GdlfvvRNaGn~v~~~-----d~~~~~sleyAv~~l~v~~IvV~GHt~CGa   75 (201)
T 3e3i_A            1 LADHQTPHYLWIACSDSRVPAEKLTNLEPGELFVHRNVANQVIHT-----DFNCLSVVQYAVDVLKIEHIIICGHTNCGG   75 (201)
T ss_dssp             -----CCCEEEEEETTCCSCHHHHHTCCTTSEEEEEETTCCCCTT-----CHHHHHHHHHHHHTSCCCEEEEEEESSCHH
T ss_pred             HCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCC-----CHHHHHHHHHEEEECCCCEEEEECCCCCCC
T ss_conf             606899964999775779798886589986457774126778984-----344466412201316864699972677752


Q ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHCCCCEEEEEEEE
Q ss_conf             8875300001346331014689888899998640163246879999999999999730978899-997799679999998
Q gi|254780663|r  108 IQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNK-LEKEHMLQIHGAWFD  186 (207)
Q Consensus       108 v~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~-~v~~g~l~I~G~~yD  186 (207)
                      |++++....... ...++..+....+............+..+.++++||++|+++|+++|+|++ ++.+|+|.||||+||
T Consensus        76 v~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~~qv~~L~~~p~v~~~~~~~g~l~V~G~~yd  154 (201)
T 3e3i_A           76 IHAAMADKDLGL-INNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYD  154 (201)
T ss_dssp             HHHHHSCCCCST-HHHHHHHHHHHHHHTHHHHHTBCGGGHHHHHHHHHHHHHHHHHHTSHHHHHHHHTTCCCEEEEEEEC
T ss_pred             HHHHHCCCCCCC-CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEEEE
T ss_conf             022210344565-4247887889999877651034505678889999999999999729688899984993189999998


Q ss_pred             CCCCEEEEEECCCCEEEE
Q ss_conf             898769998468882583
Q gi|254780663|r  187 ISSGKLWILDPTSNEFTC  204 (207)
Q Consensus       187 i~tG~v~~l~~~~~~F~~  204 (207)
                      ++||+|++++...+.|+.
T Consensus       155 i~tG~v~~~~~~~~~~~~  172 (201)
T 3e3i_A          155 VNDGFLVDQGVMATSRET  172 (201)
T ss_dssp             TTTCCEEEEEEEESSHHH
T ss_pred             CCCCEEEECCCCCCCCHH
T ss_conf             898479973688886102


No 6  
>>1ddz_A Carbonic anhydrase; alpha-beta-alpha; 2.20A {Porphyridium cruentum} (A:67-320)
Probab=100.00  E-value=1.4e-45  Score=316.28  Aligned_cols=166  Identities=27%  Similarity=0.408  Sum_probs=142.8

Q ss_pred             CEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             75999962678998888517886624888624223457777753025788877672205766899981585389887530
Q gi|254780663|r   34 PKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        34 P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      |+++|||||||||+|+.+||++|||+||+||+||+|+|+     +.++++|||||+.+|+|++|||||||+||||+++++
T Consensus         1 P~~l~I~CsDSRV~pe~i~~~~pGdlFVvRNaGN~V~~~-----d~~~~asleyAV~~L~V~~IvV~GHt~CGav~a~~~   75 (254)
T 1ddz_A            1 PEYLWIGCADSRVPANQLLDLPAGEVFVHRNIANQCIHS-----DISFLSVLQYAVQYLKVKHILVCGHYGCGGAKAALG   75 (254)
T ss_dssp             CSEEEEEETTCSSCHHHHTTCCTTSEEEEEEGGGCCCTT-----CHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHH
T ss_pred             CCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCC-----CCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHC
T ss_conf             976999877768898997099998679986058877876-----503789999999861886799936899842887640


Q ss_pred             HHCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHCCHHHHHH-HHCCCCEEEEEEEECCCCE
Q ss_conf             000134633101468988889999864016-32468799999999999997309788999-9779967999999889876
Q gi|254780663|r  114 SNNSSTSPGDFIGKWMDIVRPIAQKIVANN-PTEKQTILEQLSIRNSLKNIRNFPFVNKL-EKEHMLQIHGAWFDISSGK  191 (207)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~nV~~~v~~L~~~p~i~~~-v~~g~l~I~G~~yDi~tG~  191 (207)
                      ..... ....++..|....++....+.... +.+..+.++++||+.|+++|+++|+|+++ +++|+|.||||+||++||+
T Consensus        76 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~NV~~qve~L~~~p~V~~~~~~~g~l~VhG~vYDi~tG~  154 (254)
T 1ddz_A           76 DSRLG-LIDNWLRHIRDVRRMNAKYLDKCKDGDEELNRLIELNVLEQVHNVCATSIVQDAWDAGQELTVQGVVYGVGDGK  154 (254)
T ss_dssp             CCCCT-HHHHHHHHHHHHHHHTHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHTTCCCEEEEEEECTTTTC
T ss_pred             CCCCC-HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEEEECCCCE
T ss_conf             45443-37899998899999877643025887999999999999999999850988899997699408999999889716


Q ss_pred             EEEEECCCCEEEEC
Q ss_conf             99984688825833
Q gi|254780663|r  192 LWILDPTSNEFTCD  205 (207)
Q Consensus       192 v~~l~~~~~~F~~~  205 (207)
                      |++|+...+.|+..
T Consensus       155 v~~l~~~~~~~~~l  168 (254)
T 1ddz_A          155 LRDLGVVVNSSDDI  168 (254)
T ss_dssp             CEEEEEESCCCCCC
T ss_pred             EEECCCCCCCHHHH
T ss_conf             99766877885787


No 7  
>>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A (A:64-243)
Probab=100.00  E-value=1.4e-44  Score=309.11  Aligned_cols=167  Identities=28%  Similarity=0.436  Sum_probs=152.5

Q ss_pred             CCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
Q ss_conf             97599996267899888851788662488862422345777775302578887767220576689998158538988753
Q gi|254780663|r   33 KPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVL  112 (207)
Q Consensus        33 ~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~  112 (207)
                      +|+++||||||||++|+.+||++|||+||+||+||+|+|.     ++++++|||||+..|++++|+|||||+||||++++
T Consensus         1 sP~~~vi~C~DsRv~~e~i~~~~~GdlfviRn~Gn~v~~~-----~~~~~~sleyAv~~l~v~~IvV~GHt~CGav~a~~   75 (180)
T 2w3q_A            1 APNFLWIGCADSRVPEVTIMARKPGDVFVQRNVANQFKPE-----DDSSQALLNYAIMNVGVTHVMVVGHTGCGGCIAAF   75 (180)
T ss_dssp             CCSEEEEEECCTTCCHHHHTTCCTTSEEEEEEGGGCCCTT-----CHHHHHHHHHHHHTTCCCEEEEEEETTCHHHHHHH
T ss_pred             CCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCC-----CCCEEEEEEEEEEECCCCEEEEECCCCCHHHHHHH
T ss_conf             9976999774879899997299997479996027713887-----78603667876554586579992587732899987


Q ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC------CCEEEEEEEE
Q ss_conf             0000134633101468988889999864016324687999999999999973097889999779------9679999998
Q gi|254780663|r  113 DSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEH------MLQIHGAWFD  186 (207)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g------~l~I~G~~yD  186 (207)
                      +...... ...++..|...+++...........+..+.++++||..|+++|++||+|++++++|      +|+||||+||
T Consensus        76 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~~qv~~L~~~p~i~~~~~~g~~~~~~~l~V~G~~yd  154 (180)
T 2w3q_A           76 DQPLPTE-ENPGGTPLVRYLEPIIRLKHSLPEGSDVNDLIKENVKMAVKNVVNSPTIQGAWEQARKGEFREVFVHGWLYD  154 (180)
T ss_dssp             TCCCC------CCSHHHHHTHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSSCCCEEEEEEEE
T ss_pred             HCCCCCC-CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf             3423444-477401689999999998733846778889999999999999970989999998533167883389999998


Q ss_pred             CCCCEEEEEECCCCEEEEC
Q ss_conf             8987699984688825833
Q gi|254780663|r  187 ISSGKLWILDPTSNEFTCD  205 (207)
Q Consensus       187 i~tG~v~~l~~~~~~F~~~  205 (207)
                      ++||+|++++.+++.|+..
T Consensus       155 i~tG~v~~l~~~~~~~~~~  173 (180)
T 2w3q_A          155 LSTGNIVDLNVTQGPHPFV  173 (180)
T ss_dssp             TTTTEEEECSCCBCSCC--
T ss_pred             CCCCEEEEECCCCCCCCCC
T ss_conf             8996798847887888650


No 8  
>>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in europe, spine, structural genomics; 2.00A {Mycobacterium tuberculosis H37RV} (A:33-172)
Probab=100.00  E-value=3.9e-40  Score=280.26  Aligned_cols=139  Identities=24%  Similarity=0.382  Sum_probs=119.6

Q ss_pred             CCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
Q ss_conf             89975999962678998888517886624888624223457777753025788877672205766899981585389887
Q gi|254780663|r   31 QQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQA  110 (207)
Q Consensus        31 ~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~a  110 (207)
                      ||+|+++||||||||++|+.+||.+|||+|++||+||+|+        .+.++||+||+.+|++++|+|||||+|||+++
T Consensus         2 gq~p~~~vi~C~DsRv~~~~i~~~~~Gd~fv~Rn~Gn~v~--------~~~~~sle~av~~l~v~~IvV~GHt~Cg~~~~   73 (140)
T 1ylk_A            2 PPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT--------DDVIRSLAISQRLLGTREIILLHHTDCGMLTF   73 (140)
T ss_dssp             SCTTCEEEEEECCTTCCHHHHHTCCTTSEEEEEETTSCCC--------HHHHHHHHHHHHTTCCCEEEEEEESSCGGGSC
T ss_pred             CCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCC--------HHHHCEEEEEEEECCCCEEEEEEECCCCCCCC
T ss_conf             8898669999646675787874899975799985055588--------03310035403106986899997368886312


Q ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCC
Q ss_conf             53000013463310146898888999986401632468799999999999997309788999977996799999988987
Q gi|254780663|r  111 VLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIHGAWFDISSG  190 (207)
Q Consensus       111 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~G~~yDi~tG  190 (207)
                      +.+.......               ..........+..+.++++||++|+++|++||++++     +|+||||+||++||
T Consensus        74 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~e~nV~~qv~~L~~~p~v~~-----~l~I~G~~ydi~tG  133 (140)
T 1ylk_A           74 TDDDFKRAIQ---------------DETGIRPTWSPESYPDAVEDVRQSLRRIEVNPFVTK-----HTSLRGFVFDVATG  133 (140)
T ss_dssp             CHHHHHHHHH---------------HHHSCCCSSCCCCCSCHHHHHHHHHHHHHTCTTCCC-----CSEEEEEEECTTTC
T ss_pred             CHHHHHHHHH---------------HHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCC-----CCEEEEEEEECCCC
T ss_conf             4345543211---------------431368402221122689999999999972915256-----97899999988998


Q ss_pred             EEEEEEC
Q ss_conf             6999846
Q gi|254780663|r  191 KLWILDP  197 (207)
Q Consensus       191 ~v~~l~~  197 (207)
                      +|++++|
T Consensus       134 ~v~~l~p  140 (140)
T 1ylk_A          134 KLNEVTP  140 (140)
T ss_dssp             CEEEECC
T ss_pred             EEEEECC
T ss_conf             6988379


No 9  
>>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} (A:19-170)
Probab=100.00  E-value=1.8e-39  Score=275.99  Aligned_cols=149  Identities=23%  Similarity=0.337  Sum_probs=122.7

Q ss_pred             HCCCCCEEEEEECCCCCCCH--HHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf             23899759999626789988--8851788662488862422345777775302578887767220576689998158538
Q gi|254780663|r   29 ANQQKPKIMIISCCDSRVAP--ETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCG  106 (207)
Q Consensus        29 ~~~q~P~~~vitC~DsRv~~--~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CG  106 (207)
                      ++||+|+++||||||||++|  +.+||..|||+|++||+||+|+        .+.++||+||+..|++++|+|||||+||
T Consensus         2 ~~~q~p~~~vitC~DsRv~p~~e~i~~~~~Ge~fv~Rn~Gn~v~--------~~~~~sl~~av~~l~v~~IiV~gHt~Cg   73 (152)
T 1g5c_A            2 DLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVD--------DGVIRSAAVAIYALGDNEIIIVGHTDCG   73 (152)
T ss_dssp             GSSSSCCEEEEEECCGGGTTHHHHHHTCCTTSCEEEEETTCCCC--------HHHHHHHHHHHHHHCCCEEEEEEESSCC
T ss_pred             CCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCEEEEEECCCCCC--------HHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             26999967999886789981378883899963799850366798--------4578999999986499779996678888


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEE
Q ss_conf             98875300001346331014689888899998640163246879999999999999730978899997799679999998
Q gi|254780663|r  107 GIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQIHGAWFD  186 (207)
Q Consensus       107 av~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~G~~yD  186 (207)
                      |++++.+...................         .......+.++++||++|+++|+++|+|++     ++.||||+||
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~nV~~~v~~L~~~p~i~~-----~i~v~G~~yd  139 (152)
T 1g5c_A           74 MARLDEDLIVSRMRELGVEEEVIENF---------SIDVLNPVGDEEENVIEGVKRLKSSPLIPE-----SIGVHGLIID  139 (152)
T ss_dssp             TTSCCHHHHHHHHHHTTCCHHHHHHH---------HHHHTSSCCCHHHHHHHHHHHHHHCTTSCT-----TSEEEEEEEC
T ss_pred             EEEECHHHCCCCCCCCCCCHHHHHHH---------CHHHCCCHHHHHHHHHHHHHHHHCCCCHHC-----CCEEEEEEEE
T ss_conf             06734100234222233138888640---------222206201399999999999970930320-----8789999998


Q ss_pred             CCCCEEEEEECCC
Q ss_conf             8987699984688
Q gi|254780663|r  187 ISSGKLWILDPTS  199 (207)
Q Consensus       187 i~tG~v~~l~~~~  199 (207)
                      ++||+|+.++.+.
T Consensus       140 i~tG~v~~~~~~~  152 (152)
T 1g5c_A          140 INTGRLKPLYLDE  152 (152)
T ss_dssp             TTTCCEEEEECCC
T ss_pred             CCCCEEEEECCCC
T ss_conf             8996287717999


No 10 
>>1ddz_A Carbonic anhydrase; alpha-beta-alpha; 2.20A {Porphyridium cruentum} (A:1-66,A:321-496)
Probab=99.97  E-value=6.9e-29  Score=207.22  Aligned_cols=182  Identities=29%  Similarity=0.499  Sum_probs=158.2

Q ss_pred             HHHHHHHHHHHCC--CCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHH
Q ss_conf             9999999997068--79889998623899759999626789988885178866248886242234577777530257888
Q gi|254780663|r    7 TLLERHREFIQDQ--YDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAA   84 (207)
Q Consensus         7 ~Ll~~N~~f~~~~--~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~s   84 (207)
                      .+...|+.|....  ++|++|.+|+.||+|.++|++|.|||+|.+.|.++..||+|++||++|..-++     +.+.++.
T Consensus        38 nifanneawrqemlkqdpeffnrlangqspeilwigcadsrvpanqiinlpagevfvhrnianqcihs-----dmsflsv  112 (242)
T 1ddz_A           38 NIFANNEAWRQEMLKQDPEFFNRLANGQSPEILWIGCADSRVPANQIINLPAGEVFVHRNIANQCIHS-----DMSFLSV  112 (242)
T ss_dssp             HHHHHHHHHHHHHHHHCTTHHHHHHTCCCCSEEEEEETTCSSCHHHHTTCCTTSEEEEEETTCCCCTT-----CHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCC-----CCCHHHH
T ss_conf             99999999997524449799998637999976999853779899997199997679987358857887-----6422355


Q ss_pred             HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHHHHHHH
Q ss_conf             7767220576689998158538988753000013463310146898888999986-----40163246879999999999
Q gi|254780663|r   85 IEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKI-----VANNPTEKQTILEQLSIRNS  159 (207)
Q Consensus        85 le~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~nV~~~  159 (207)
                      +.||+..|+|+.++||||+.||++.++...     ...+++++|+..++|.....     .-.++.+..+.+.+.|+++|
T Consensus       113 lqyavqylkvkrvvvcghYa~~~Ca~~lS~-----SAlgLIDnWlRHIRPIRr~~KRElS~ITDpkDsLdRLsqINvLqQ  187 (242)
T 1ddz_A          113 LQYAVQYLKVKRVVVCGHYACGGCAAALGD-----SRLGLIDNWLRHIRDVRRHNQAELSRITDPKDSLNRLIEINVLEQ  187 (242)
T ss_dssp             HHHHHHTSCCSEEEEEEETTCHHHHHTTSC-----CCCTTHHHHTHHHHHHHHTTHHHHTTCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCEEEEECCCCCHHHHCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf             899998618977999089996777610205-----644517999999999999877653235887899999999999999


Q ss_pred             HHHHHCCHHHHHHHHCCC-CEEEEEEEECCCCEEEEEECC
Q ss_conf             999730978899997799-679999998898769998468
Q gi|254780663|r  160 LKNIRNFPFVNKLEKEHM-LQIHGAWFDISSGKLWILDPT  198 (207)
Q Consensus       160 v~~L~~~p~i~~~v~~g~-l~I~G~~yDi~tG~v~~l~~~  198 (207)
                      ++++.++.+++++++.|+ |.|-|.+|-+.+|++.....-
T Consensus       188 l~nVas~~~~qdawdagqelevqgvvygvgdgklrdmgvv  227 (242)
T 1ddz_A          188 MHNVCATSIVQDAWDAGQELEVQGVVYGVGDGKLRDMGVV  227 (242)
T ss_dssp             HHHHHHSHHHHHHHHTTCCCEEEEEEECTTTTCCEEEEEE
T ss_pred             HHHHHCCHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECC
T ss_conf             9999739776799875995189999998898179997088


No 11 
>>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus} (A:92-140)
Probab=78.38  E-value=1.9  Score=22.59  Aligned_cols=36  Identities=22%  Similarity=0.478  Sum_probs=29.7

Q ss_pred             HHHHH-HCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCC
Q ss_conf             99997-3097889999779967999999889876999846888
Q gi|254780663|r  159 SLKNI-RNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDPTSN  200 (207)
Q Consensus       159 ~v~~L-~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~~~  200 (207)
                      .++.| +.||-|.++++.|+      ++|+.||.+..+++.-+
T Consensus         4 v~rqLarRYP~l~kAv~TGR------v~D~~t~tlr~Y~P~iN   40 (49)
T 2hwk_A            4 VVRQLSRRYPQLPRAVATGR------VYDMNTGTLRNYDPRIN   40 (49)
T ss_dssp             HHHHHHTTCTTHHHHHHHTC------EECTTTSSEECCCTTSC
T ss_pred             HHHHHHHHCCHHHHHHCCCE------EEEECCCCCCCCCCCCC
T ss_conf             99999886853233313773------89834784425886543


No 12 
>>3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans} (A:87-123)
Probab=51.83  E-value=7.2  Score=18.87  Aligned_cols=15  Identities=33%  Similarity=0.618  Sum_probs=13.9

Q ss_pred             EEEEEECCCCEEEEE
Q ss_conf             999998898769998
Q gi|254780663|r  181 HGAWFDISSGKLWIL  195 (207)
Q Consensus       181 ~G~~yDi~tG~v~~l  195 (207)
                      |||-|++++|+|...
T Consensus        13 Hg~Tf~l~dG~L~~I   27 (37)
T 3gcf_A           13 HGWTYDLDDGRLVDV   27 (37)
T ss_dssp             TCEEEETTTCBEEEE
T ss_pred             CCCEECCCCCCCCCC
T ss_conf             898884887524457


No 13 
>>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} (A:)
Probab=50.09  E-value=7.1  Score=18.88  Aligned_cols=27  Identities=22%  Similarity=0.250  Sum_probs=22.4

Q ss_pred             CCEEEEEEEECCCCEEEEEECCCCEEE
Q ss_conf             967999999889876999846888258
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWILDPTSNEFT  203 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l~~~~~~F~  203 (207)
                      ++.|.||+.+..+|.+..+....+.|.
T Consensus        32 ~~~l~G~V~N~~dGv~~~~~g~~~~~~   58 (91)
T 1gxu_A           32 QLNLHGDVCNDGDGVEVRLREDPEVFL   58 (91)
T ss_dssp             HHTCCEEEEECSSSEEEEESSCCHHHH
T ss_pred             HCCCEEEEEECCCCCEEEEECCHHHHH
T ss_conf             859919999889997999987999999


No 14 
>>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A (A:)
Probab=49.28  E-value=15  Score=16.84  Aligned_cols=19  Identities=21%  Similarity=0.324  Sum_probs=16.2

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        39 ~lgl~G~V~N~~dG~Vei~   57 (101)
T 2bjd_A           39 RLGIKGYAKNLPDGSVEVV   57 (101)
T ss_dssp             HTTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCEEEEE
T ss_conf             7498079999999989999


No 15 
>>1ctt_A Cytidine deaminase; hydrolase; HET: DHZ; 2.20A {Escherichia coli} (A:174-294)
Probab=47.05  E-value=19  Score=16.17  Aligned_cols=66  Identities=12%  Similarity=0.005  Sum_probs=40.0

Q ss_pred             HCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC-----CCHHHHHHHHHHHCC
Q ss_conf             178866248886242234577777530257888776722057668999815-----853898875300001
Q gi|254780663|r   52 FNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGH-----GRCGGIQAVLDSNNS  117 (207)
Q Consensus        52 ~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GH-----t~CGav~aa~~~~~~  117 (207)
                      .-..-|.+|.=.|+-|-.-+.....+..+....+..+-....++.|++...     +-||+....+.....
T Consensus        42 l~~~~G~iy~G~nvEna~~~~slcaE~~Ai~~a~~~g~~~~~i~~i~~~~~~~~~~sPCG~CRq~L~e~~~  112 (121)
T 1ctt_A           42 LECKDGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGC  112 (121)
T ss_dssp             EEETTSCEEEEECBCCTTSTTCBCHHHHHHHHHHHTTCCGGGEEEEEEEECTTCSSCCHHHHHHHHHHHTC
T ss_pred             EEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf             99589999998877505678875899999999997599846678999993799986818999999998577


No 16 
>>3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein structure initiative, PSI; 2.07A {Mus musculus} (A:61-117)
Probab=46.85  E-value=9.6  Score=18.04  Aligned_cols=26  Identities=8%  Similarity=-0.042  Sum_probs=18.6

Q ss_pred             EEEEEEEECCCCEEEEEEC--CCCEEEE
Q ss_conf             7999999889876999846--8882583
Q gi|254780663|r  179 QIHGAWFDISSGKLWILDP--TSNEFTC  204 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~~l~~--~~~~F~~  204 (207)
                      +.|||-||++||+......  .-..|.+
T Consensus        21 P~H~~~Fdl~tG~~~~~p~~~~l~~y~V   48 (57)
T 3d89_A           21 PWHKYKITLATGEGLYQSINPKDPSAKP   48 (57)
T ss_dssp             TTTCCEEETTTCEEEEEECCCC-----C
T ss_pred             CCCCCEEECCCCCEEECCCCCCCCCCCC
T ss_conf             8999789799968876376655556664


No 17 
>>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} (A:1-140,A:249-317)
Probab=46.67  E-value=19  Score=16.13  Aligned_cols=82  Identities=15%  Similarity=0.166  Sum_probs=49.7

Q ss_pred             CCCEEEEE-ECCCCCCCHHHH--HCCCCCCEEEE--ECCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf             99759999-626789988885--17886624888--624223457777-7530257888776722057668999815853
Q gi|254780663|r   32 QKPKIMII-SCCDSRVAPETI--FNAKPGELFVV--RNVANIVPPYEP-DGQHHATSAAIEFAVQGLNVEHIVVMGHGRC  105 (207)
Q Consensus        32 q~P~~~vi-tC~DsRv~~~~i--~~~~~Gd~fv~--RnaGn~v~~~~~-~~~~~~~~~sle~av~~l~v~~iiV~GHt~C  105 (207)
                      +.|.++++ +-..+.......  |...--.++.+  |-.|.--++.+. ..........++.-...++++.++|+|||-.
T Consensus        36 ~g~pvi~lHG~~g~~~~~~~~~~~~~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~lv~di~~i~~~l~i~~~~l~G~S~G  115 (209)
T 1wm1_A           36 NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWG  115 (209)
T ss_dssp             TSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHH
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf             99879998999987414466776521798899996898868887555544310223566887665307666167872354


Q ss_pred             HHHHHHHH
Q ss_conf             89887530
Q gi|254780663|r  106 GGIQAVLD  113 (207)
Q Consensus       106 Gav~aa~~  113 (207)
                      |.+...+.
T Consensus       116 g~ial~~A  123 (209)
T 1wm1_A          116 STLALAYA  123 (209)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             46899999


No 18 
>>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A (A:)
Probab=43.99  E-value=20  Score=15.98  Aligned_cols=19  Identities=21%  Similarity=0.223  Sum_probs=16.2

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        27 ~~gl~G~V~N~~dg~Vei~   45 (91)
T 2fhm_A           27 KRKLAGWVKNRDDGRVEIL   45 (91)
T ss_dssp             HTTCEEEEEECTTSCEEEE
T ss_pred             HCCCCEEEEECCCCCEEEE
T ss_conf             7398199999999989999


No 19 
>>2hu5_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase, beta-propeller, enzyme-inhibitor complex; HET: PHE; 2.00A {Aeropyrum pernix} (A:1-22,A:325-582)
Probab=43.67  E-value=21  Score=15.83  Aligned_cols=36  Identities=19%  Similarity=0.123  Sum_probs=30.0

Q ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             025788877672205766899981585389887530
Q gi|254780663|r   78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      ..++.++++|......++.|.|+|||--|.+.....
T Consensus       118 ~~D~~~~~~~l~~~~~~~ri~i~G~S~GG~~a~~~~  153 (280)
T 2hu5_A          118 LEDVSAAARWARESGLASELYIMGYSYGGYMTLCAL  153 (280)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHH
T ss_conf             355899999876347761798622466763222100


No 20 
>>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxidoreductase; 1.60A {Burkholderia xenovorans LB400} (A:16-87)
Probab=42.80  E-value=7.2  Score=18.85  Aligned_cols=17  Identities=24%  Similarity=0.290  Sum_probs=13.5

Q ss_pred             EEEEEEEECCCCEEEEE
Q ss_conf             79999998898769998
Q gi|254780663|r  179 QIHGAWFDISSGKLWIL  195 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~~l  195 (207)
                      +.|||.||+.||++..-
T Consensus        52 p~Hg~~F~l~tG~~~~~   68 (72)
T 1fqt_A           52 SLHMGKFCVRTGKVKSP   68 (72)
T ss_dssp             TTTCCEEETTTCCEEES
T ss_pred             CCCCCEEECCCCCCCCC
T ss_conf             88898999998569458


No 21 
>>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A (A:196-308)
Probab=42.62  E-value=16  Score=16.62  Aligned_cols=31  Identities=32%  Similarity=0.521  Sum_probs=23.0

Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             88877672205766899981585389887530
Q gi|254780663|r   82 SAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        82 ~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      .+.++-....++++.||| |||-=.+|...++
T Consensus        72 c~~l~~~L~~~g~~riVv-GHTpq~~i~~~c~  102 (113)
T 2z72_A           72 EAELDTILQHFNVNHIVV-GHTSQERVLGLFH  102 (113)
T ss_dssp             HHHHHHHHHHHTCSEEEE-CSSCCSSCEEETT
T ss_pred             HHHHHHHHHHCCCCEEEE-CCEECCCCCEEEC
T ss_conf             789999998779979999-7846378768419


No 22 
>>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} (A:12-82)
Probab=42.17  E-value=7.5  Score=18.75  Aligned_cols=16  Identities=25%  Similarity=0.403  Sum_probs=12.3

Q ss_pred             EEEEEEEECCCCEEEE
Q ss_conf             7999999889876999
Q gi|254780663|r  179 QIHGAWFDISSGKLWI  194 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~~  194 (207)
                      ..|||.||+.||++..
T Consensus        51 p~Hg~~Fdl~tG~~~~   66 (71)
T 3dqy_A           51 TLHFGKFXVRTGKVKA   66 (71)
T ss_dssp             TTTCCEEETTTCCEEE
T ss_pred             ECCCCEEECCCCEEEC
T ss_conf             4588789889822945


No 23 
>>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida} (A:14-84)
Probab=40.39  E-value=6.9  Score=18.96  Aligned_cols=17  Identities=29%  Similarity=0.560  Sum_probs=13.3

Q ss_pred             EEEEEEEECCCCEEEEE
Q ss_conf             79999998898769998
Q gi|254780663|r  179 QIHGAWFDISSGKLWIL  195 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~~l  195 (207)
                      +.|||.||+.||++..-
T Consensus        51 p~H~~~fdl~tG~~~~~   67 (71)
T 2qpz_A           51 PLHQGRFDVCTGKALCA   67 (71)
T ss_dssp             TTTTCEEETTTCCEEET
T ss_pred             CCCCCEEECCCCCEECC
T ss_conf             16898996898228448


No 24 
>>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} (A:)
Probab=40.10  E-value=21  Score=15.82  Aligned_cols=19  Identities=16%  Similarity=0.167  Sum_probs=15.0

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        36 ~lgl~G~V~N~~dG~Vei~   54 (102)
T 1urr_A           36 RLGVRGWCMNTRDGTVKGQ   54 (102)
T ss_dssp             HHTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCCEEEE
T ss_conf             8399799999799979999


No 25 
>>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D* (D:50-86)
Probab=39.80  E-value=7.7  Score=18.67  Aligned_cols=17  Identities=24%  Similarity=0.385  Sum_probs=14.2

Q ss_pred             EEEEEEEECCCCEEEEE
Q ss_conf             79999998898769998
Q gi|254780663|r  179 QIHGAWFDISSGKLWIL  195 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~~l  195 (207)
                      +.||+.||+.||++...
T Consensus        17 P~H~a~Fdi~tG~~~~~   33 (37)
T 2de6_D           17 PFHGGAFNVCTGMPASS   33 (37)
T ss_dssp             TTTCCEEETTTCCEEET
T ss_pred             CCCCCEEECCCCEECCC
T ss_conf             45688884899519868


No 26 
>>2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} (A:1-147)
Probab=39.59  E-value=13  Score=17.27  Aligned_cols=20  Identities=15%  Similarity=0.022  Sum_probs=13.8

Q ss_pred             CEEEEEEEECCCCEEEEEEC
Q ss_conf             67999999889876999846
Q gi|254780663|r  178 LQIHGAWFDISSGKLWILDP  197 (207)
Q Consensus       178 l~I~G~~yDi~tG~v~~l~~  197 (207)
                      -..|||.||++||++.....
T Consensus        90 Cp~H~~~f~l~tG~~~~~p~  109 (147)
T 2de6_A           90 CWYHAWTYRWEDGVLCDILT  109 (147)
T ss_dssp             CTTTCEEEETTTCBEEEETT
T ss_pred             CCCCCEEEECCCCCCCCCCC
T ss_conf             79788599535441000000


No 27 
>>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2k7k_A 2k7j_A 2acy_A (A:)
Probab=37.64  E-value=26  Score=15.24  Aligned_cols=22  Identities=18%  Similarity=0.105  Sum_probs=16.5

Q ss_pred             CCEEEEEEEECCCCEEEE-EECC
Q ss_conf             967999999889876999-8468
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWI-LDPT  198 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~-l~~~  198 (207)
                      ++.|.||+.+..+|.|+. +.++
T Consensus        33 ~~gl~G~V~N~~dG~V~~~~qG~   55 (99)
T 2vh7_A           33 KLGLVGWVQNTDRGTVQGQLQGP   55 (99)
T ss_dssp             HTTCEEEEEECTTSCEEEEEEEE
T ss_pred             HHCCEEEEEECCCCEEEEEEEEC
T ss_conf             81988999999999899999809


No 28 
>>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae} (A:49-86)
Probab=37.37  E-value=5.3  Score=19.70  Aligned_cols=16  Identities=38%  Similarity=0.617  Sum_probs=13.2

Q ss_pred             EEEEEEEECCCCEEEE
Q ss_conf             7999999889876999
Q gi|254780663|r  179 QIHGAWFDISSGKLWI  194 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~~  194 (207)
                      ..||+.||+.||++..
T Consensus        17 P~H~~~Fdi~tG~~~~   32 (38)
T 2i7f_A           17 PFHGGSFDIATGAAKA   32 (38)
T ss_dssp             SSTTCEEETTTCCBCS
T ss_pred             CCCCCEEECCCCCEEC
T ss_conf             2558798578885816


No 29 
>>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} (A:)
Probab=37.16  E-value=26  Score=15.19  Aligned_cols=52  Identities=13%  Similarity=0.194  Sum_probs=35.5

Q ss_pred             EECCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             8624223457777-753025788877672205766899981585389887530
Q gi|254780663|r   62 VRNVANIVPPYEP-DGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        62 ~RnaGn~v~~~~~-~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      .|-.|..-.+... ..........+.+.....+.+.|.++|||-.|.+...+.
T Consensus        77 ~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a  129 (220)
T 2fuk_A           77 FRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAA  129 (220)
T ss_dssp             CTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
T ss_conf             57755678877777534999999988865415674599999646505441111


No 30 
>>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} (A:)
Probab=35.47  E-value=28  Score=15.06  Aligned_cols=19  Identities=16%  Similarity=0.251  Sum_probs=16.2

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        29 ~~gl~G~V~N~~dG~Vei~   47 (91)
T 1w2i_A           29 KLGVNGWVRNLPDGSVEAV   47 (91)
T ss_dssp             HHTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCEEEEE
T ss_conf             6397379999999859999


No 31 
>>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural genomics, NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii OT3} (A:163-357)
Probab=35.24  E-value=19  Score=16.17  Aligned_cols=10  Identities=10%  Similarity=0.175  Sum_probs=3.3

Q ss_pred             EEEEEECCCC
Q ss_conf             5999962678
Q gi|254780663|r   35 KIMIISCCDS   44 (207)
Q Consensus        35 ~~~vitC~Ds   44 (207)
                      .++++|..++
T Consensus         7 ~v~ivG~~~~   16 (195)
T 2e87_A            7 TVVIAGHPNV   16 (195)
T ss_dssp             EEEEECSTTS
T ss_pred             EEEEECCCCC
T ss_conf             7999617884


No 32 
>>2c78_A Elongation factor TU-A; hydrolase, GTPase, translation elongation factor, protein synthesis, antibiotic, GTP-binding, nucleotide-binding; HET: GNP PUL; 1.4A {Thermus thermophilus} (A:1-215)
Probab=34.10  E-value=15  Score=16.71  Aligned_cols=58  Identities=17%  Similarity=0.042  Sum_probs=25.7

Q ss_pred             CEEEEEECCCCCC-CHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
Q ss_conf             7599996267899-88885178866248886242234577777530257888776722057668999
Q gi|254780663|r   34 PKIMIISCCDSRV-APETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVV   99 (207)
Q Consensus        34 P~~~vitC~DsRv-~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV   99 (207)
                      .++.+|-|.-..- ..+.+.++...|.-++=..+.--       ....+...+. ....+|++.++|
T Consensus        75 ~~~~~iDtPGh~dF~~~~~~~~~~~D~ailVvda~~G-------~~~qT~~~~~-~a~~~~~~~~iv  133 (215)
T 2c78_A           75 RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADG-------PMPQTREHIL-LARQVGVPYIVV  133 (215)
T ss_dssp             CEEEEEECCCSGGGHHHHHHHHTTCSSEEEEEETTTC-------CCHHHHHHHH-HHHHTTCCCEEE
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCC-------CCHHHHHHHH-HHHHCCCCEEEE
T ss_conf             4899962898177899987435109989999998999-------8554599999-999859986999


No 33 
>>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} (A:)
Probab=33.51  E-value=26  Score=15.22  Aligned_cols=19  Identities=16%  Similarity=0.027  Sum_probs=15.6

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        32 ~~gl~G~V~N~~dG~Vei~   50 (98)
T 1aps_A           32 KIGVVGWVKNTSKGTVTGQ   50 (98)
T ss_dssp             HHTCEEEEECCTTCEEEEE
T ss_pred             HCCCEEEEEECCCCCEEEE
T ss_conf             8599699999999989999


No 34 
>>2rdo_7 EF-G, elongation factor G; elongation factor G, EF-G, RRF, GDPNP, 50S subunit, cryo-EM, REAL-space refinement, ribonucleoprotein; 9.10A {Escherichia coli} (7:1-289)
Probab=32.88  E-value=17  Score=16.46  Aligned_cols=49  Identities=16%  Similarity=0.131  Sum_probs=26.8

Q ss_pred             HHHHHCCCC--CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf             888517886--62488862422345777775302578887767220576689998158538
Q gi|254780663|r   48 PETIFNAKP--GELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCG  106 (207)
Q Consensus        48 ~~~i~~~~~--Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CG  106 (207)
                      .+.+.++..  |=++|+--..++-+          -...+-+....++++.|+++=+-|-=
T Consensus        97 ~~~~~~l~~~D~ailVVdA~~Gv~~----------qT~~~~~~a~~~~~p~i~~iNK~D~~  147 (289)
T 2rdo_7           97 IEVERSMRVLDGAVMVYCAVGGVQP----------QSETVWRQANKYKVPRIAFVNKMDRM  147 (289)
T ss_pred             HHHHHHHHHHCEEEEEEECCCCCCH----------HHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             9999999885857999978988647----------58999999987699869997330245


No 35 
>>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} (A:)
Probab=32.07  E-value=32  Score=14.66  Aligned_cols=19  Identities=16%  Similarity=0.319  Sum_probs=16.6

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        27 ~~~l~G~V~N~~dG~Vei~   45 (88)
T 1ulr_A           27 ELGLSGYAENLPDGRVEVV   45 (88)
T ss_dssp             HTTCEEEEEECTTSCEEEE
T ss_pred             HHCCEEEEEECCCCCEEEE
T ss_conf             7399389999999989999


No 36 
>>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics; 2.20A {Trypanosoma brucei} (A:)
Probab=31.27  E-value=33  Score=14.58  Aligned_cols=83  Identities=5%  Similarity=-0.021  Sum_probs=45.4

Q ss_pred             CCCCCEEEEEE--CCCCC---CCHHHHHCCCCC-CEEEE--ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             38997599996--26789---988885178866-24888--624223457777753025788877672205766899981
Q gi|254780663|r   30 NQQKPKIMIIS--CCDSR---VAPETIFNAKPG-ELFVV--RNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMG  101 (207)
Q Consensus        30 ~~q~P~~~vit--C~DsR---v~~~~i~~~~~G-d~fv~--RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~G  101 (207)
                      .+..|-++++-  ++.+.   .-....--...| .++.+  |--|.--++.............+++.+..++.+.+.++|
T Consensus        35 ~~~~~~vv~iHG~~~~~~~~~~~~~~~~~~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~g  114 (335)
T 2q0x_A           35 MDARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHAHDAEDVDDLIGILLRDHCMNEVALFA  114 (335)
T ss_dssp             TTSSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHHHHHHHHHHHHHHHHHHSCCCCEEEEE
T ss_pred             CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             99886799989988655530579999999715976999656899898898873158999999999999866987669999


Q ss_pred             CCCHHHHHHHH
Q ss_conf             58538988753
Q gi|254780663|r  102 HGRCGGIQAVL  112 (207)
Q Consensus       102 Ht~CGav~aa~  112 (207)
                      ||-.|++...+
T Consensus       115 ~S~G~~~~~~~  125 (335)
T 2q0x_A          115 TSTGTQLVFEL  125 (335)
T ss_dssp             EGGGHHHHHHH
T ss_pred             ECCCHHHHHHH
T ss_conf             56647999999


No 37 
>>2vtv_A PHB depolymerase PHAZ7; hydrolase; 1.9A {Paucimonas lemoignei} (A:15-173,A:221-342)
Probab=31.20  E-value=33  Score=14.57  Aligned_cols=35  Identities=6%  Similarity=-0.053  Sum_probs=27.7

Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             25788877672205766899981585389887530
Q gi|254780663|r   79 HATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        79 ~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      ....+.++.-...++.+.|+++|||--|.+...+.
T Consensus        98 ~Dlaa~i~~L~~~~g~~rVvLvGHSmGG~vAl~lA  132 (281)
T 2vtv_A           98 AIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATL  132 (281)
T ss_dssp             HHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
T ss_conf             99999999999975998568999783379999999


No 38 
>>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} (A:)
Probab=30.57  E-value=34  Score=14.50  Aligned_cols=84  Identities=7%  Similarity=0.046  Sum_probs=48.2

Q ss_pred             CCCCCEEEEEE--CCCCCCCHHH--HH-CCCCC-CEEEE--ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             38997599996--2678998888--51-78866-24888--624223457777753025788877672205766899981
Q gi|254780663|r   30 NQQKPKIMIIS--CCDSRVAPET--IF-NAKPG-ELFVV--RNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMG  101 (207)
Q Consensus        30 ~~q~P~~~vit--C~DsRv~~~~--i~-~~~~G-d~fv~--RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~G  101 (207)
                      .|+.|-+++|-  +.+++.--..  ++ .+..| .++.+  |.-|.--.+.+...........++..+..++.+-++++|
T Consensus        33 ~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG  112 (296)
T 1j1i_A           33 AGKGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKVSIVG  112 (296)
T ss_dssp             ECCSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHSCCSSCEEEEE
T ss_pred             ECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             88898399989999894477899999999847998999837998888999888899999999999888628888779999


Q ss_pred             CCCHHHHHHHHH
Q ss_conf             585389887530
Q gi|254780663|r  102 HGRCGGIQAVLD  113 (207)
Q Consensus       102 Ht~CGav~aa~~  113 (207)
                      ||--|.+...+.
T Consensus       113 ~S~Gg~ia~~~a  124 (296)
T 1j1i_A          113 NSMGGATGLGVS  124 (296)
T ss_dssp             EHHHHHHHHHHH
T ss_pred             ECCCHHHHHCCC
T ss_conf             234321100003


No 39 
>>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} (A:1-181)
Probab=30.52  E-value=17  Score=16.41  Aligned_cols=13  Identities=23%  Similarity=0.524  Sum_probs=6.0

Q ss_pred             CCEEEEEECCCHH
Q ss_conf             6689998158538
Q gi|254780663|r   94 VEHIVVMGHGRCG  106 (207)
Q Consensus        94 v~~iiV~GHt~CG  106 (207)
                      ...|+++||++||
T Consensus         8 ~~~i~iiG~~nvG   20 (181)
T 1ega_A            8 CGFIAIVGRPNVG   20 (181)
T ss_dssp             EEEEEEECSSSSS
T ss_pred             CCEEEEECCCCCC
T ss_conf             7489999899982


No 40 
>>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} (A:1-79,A:278-297)
Probab=30.50  E-value=34  Score=14.49  Aligned_cols=29  Identities=17%  Similarity=0.156  Sum_probs=20.8

Q ss_pred             CCCEEEEEEEECCCCEEEEEECCCCEEEE
Q ss_conf             99679999998898769998468882583
Q gi|254780663|r  176 HMLQIHGAWFDISSGKLWILDPTSNEFTC  204 (207)
Q Consensus       176 g~l~I~G~~yDi~tG~v~~l~~~~~~F~~  204 (207)
                      .++.=.=++||++||..+++-.....||-
T Consensus        18 ~~~~S~LeI~Dv~TG~~~VV~~~~~~iEA   46 (99)
T 2ojh_A           18 GSXRSSIEIFNIRTRKXRVVWQTPELFEA   46 (99)
T ss_dssp             CCCCEEEEEEETTTTEEEEEEEESSCCEE
T ss_pred             CCCEEEEEEEECCCCCEEEEECCCCCEEE
T ss_conf             98552899998999998999889997860


No 41 
>>1zo1_I IF2, translation initiation factor 2; E. coli, ribosome, initiation of protein synthesis, cryo-eletron microscopy, translation/RNA complex; 13.80A {Escherichia coli} (I:1-170)
Probab=30.39  E-value=21  Score=15.87  Aligned_cols=24  Identities=8%  Similarity=-0.069  Sum_probs=16.4

Q ss_pred             HHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf             887767220576689998158538
Q gi|254780663|r   83 AAIEFAVQGLNVEHIVVMGHGRCG  106 (207)
Q Consensus        83 ~sle~av~~l~v~~iiV~GHt~CG  106 (207)
                      .-+..-+..++.+.|+|+-.-|.-
T Consensus        93 ~~~~~~~~~~~~p~iiv~NK~D~~  116 (170)
T 1zo1_I           93 IEAIQHAKAAQVPVVVAVNKIDKP  116 (170)
T ss_dssp             HHHHHHHHHTTCCEEEEEECSSSS
T ss_pred             HHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             999999998699889999896689


No 42 
>>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli} (A:)
Probab=29.95  E-value=19  Score=16.07  Aligned_cols=19  Identities=16%  Similarity=0.289  Sum_probs=14.8

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        29 ~~gi~G~V~N~~dg~Vei~   47 (92)
T 2gv1_A           29 RLGLTGYAKNLDDGSVEVV   47 (92)
T ss_dssp             HHTCCCEEEECSSSCEEEE
T ss_pred             HCCCEEEEEECCCCCEEEE
T ss_conf             7097379999899989999


No 43 
>>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* (A:1-130,A:200-276)
Probab=29.13  E-value=36  Score=14.35  Aligned_cols=81  Identities=20%  Similarity=0.188  Sum_probs=45.2

Q ss_pred             CCCCEEEEEE--CCCCCCCHHHHHCC-CCCCEEEE--ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf             8997599996--26789988885178-86624888--6242234577777530257888776722057668999815853
Q gi|254780663|r   31 QQKPKIMIIS--CCDSRVAPETIFNA-KPGELFVV--RNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRC  105 (207)
Q Consensus        31 ~q~P~~~vit--C~DsRv~~~~i~~~-~~Gd~fv~--RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~C  105 (207)
                      +..|.++++-  |++++.--..+-.. .-..+.++  |.-|.--.+.. ..........+...+..++.+.++++|||--
T Consensus        25 ~~~p~IillHG~~~s~~~~~~l~~~La~g~~Vi~~d~pG~G~S~~~~~-~~~~~~~a~~i~~~l~~l~~~~i~ivGhSmG  103 (207)
T 2wj6_A           25 TDGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVP-DFGYQEQVKDALEILDQLGVETFLPVSHSHG  103 (207)
T ss_dssp             CSSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCCCC-CCCHHHHHHHHHHHHHHHTCCSEEEEEEGGG
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             999959998999889899999999982799899982899999999999-9999999999999999728887699974377


Q ss_pred             HHHHHHH
Q ss_conf             8988753
Q gi|254780663|r  106 GGIQAVL  112 (207)
Q Consensus       106 Gav~aa~  112 (207)
                      |.+...+
T Consensus       104 G~iAl~l  110 (207)
T 2wj6_A          104 GWVLVEL  110 (207)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             8999999


No 44 
>>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A* (A:)
Probab=28.83  E-value=25  Score=15.34  Aligned_cols=16  Identities=6%  Similarity=-0.056  Sum_probs=8.2

Q ss_pred             CCCCEEEEEECCCCCC
Q ss_conf             8997599996267899
Q gi|254780663|r   31 QQKPKIMIISCCDSRV   46 (207)
Q Consensus        31 ~q~P~~~vitC~DsRv   46 (207)
                      ...|.++++|=.++.=
T Consensus        36 ~~~~~i~iiG~~n~GK   51 (226)
T 2hf9_A           36 HGVVAFDFMGAIGSGK   51 (226)
T ss_dssp             TTCEEEEEEESTTSSH
T ss_pred             CCCEEEEEECCCCCCH
T ss_conf             5984999988999889


No 45 
>>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} (A:)
Probab=28.62  E-value=36  Score=14.29  Aligned_cols=69  Identities=20%  Similarity=0.316  Sum_probs=41.6

Q ss_pred             ECCCCCCCHHHH--HCC--CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             626789988885--178--86624888624223457777753025788877672205766899981585389887530
Q gi|254780663|r   40 SCCDSRVAPETI--FNA--KPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        40 tC~DsRv~~~~i--~~~--~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      =+-.+|+.+...  |..  .-+-+||.= .-...+    .+.-.+.++-||||-..|++.+|++|=+-+...-.+.+.
T Consensus        23 L~f~~rlte~~~~~W~~vl~~~~L~v~i-p~~~l~----~gsKesl~aLLE~Aee~L~c~~vvic~~k~r~dr~~L~r   95 (126)
T 1zo0_A           23 LSIQCTLTEAKQVTWRAVWNGGGLYIEL-PAGPLP----EGSKDSFAALLEFAEEQLRADHVFICFPKNREDRAALLR   95 (126)
T ss_dssp             EEEEECCTTSCCEEEEEEEETTEEEEEC-SSCCCS----SCCSHHHHHHHHHHHHHHCCCCEEEEECCCSSCHHHHHH
T ss_pred             EEEEEEECCCEEEEEEEEEECCEEEEEC-CCCCCC----CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH
T ss_conf             9999880556189999998288889988-876472----111889999999754323876899999788745888764


No 46 
>>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} (A:)
Probab=28.25  E-value=37  Score=14.25  Aligned_cols=36  Identities=17%  Similarity=0.175  Sum_probs=29.1

Q ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             025788877672205766899981585389887530
Q gi|254780663|r   78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      .......++..+..++.+.++++|||-=|.+...+.
T Consensus        83 ~~~~a~~i~~~~~~l~~~~~~l~G~S~Gg~~a~~~a  118 (207)
T 3bdi_A           83 LKHAAEFIRDYLKANGVARSVIXGASXGGGXVIXTT  118 (207)
T ss_dssp             HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHH
T ss_conf             778877766402232223320023557858999999


No 47 
>>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.0A {Escherichia coli} (A:1-90)
Probab=28.06  E-value=23  Score=15.54  Aligned_cols=19  Identities=47%  Similarity=0.565  Sum_probs=14.0

Q ss_pred             EECCCCCCCHHHHHCCCCCCEEEEEC
Q ss_conf             96267899888851788662488862
Q gi|254780663|r   39 ISCCDSRVAPETIFNAKPGELFVVRN   64 (207)
Q Consensus        39 itC~DsRv~~~~i~~~~~Gd~fv~Rn   64 (207)
                      ==|.|||-       ..+|++|+-.-
T Consensus        23 ~i~~DSR~-------v~~g~lFvAl~   41 (90)
T 1e8c_A           23 EXTLDSRV-------AAAGDLFVAVV   41 (90)
T ss_dssp             CEESCGGG-------CCTTCEEEECB
T ss_pred             EEEEECCC-------CCCCCEEEECC
T ss_conf             49965882-------79997899816


No 48 
>>2aiz_P Outer membrane protein P6; alpha-beta sandwich; HET: UDP AMU DGL 6CL DAL; NMR {Haemophilus influenzae} (P:)
Probab=26.98  E-value=37  Score=14.25  Aligned_cols=31  Identities=13%  Similarity=0.075  Sum_probs=21.0

Q ss_pred             CCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             3025788877672205766899981585389
Q gi|254780663|r   77 QHHATSAAIEFAVQGLNVEHIVVMGHGRCGG  107 (207)
Q Consensus        77 ~~~~~~~sle~av~~l~v~~iiV~GHt~CGa  107 (207)
                      .....+..+.-.+....-..|.|.||||..+
T Consensus        44 ~~~~~L~~~a~~l~~~p~~~i~I~Ghtd~~g   74 (134)
T 2aiz_P           44 EYVQILDAHAAYLNATPAAKVLVEGNTDERG   74 (134)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCEEEEEECCSSS
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             8999999999999869984899973124343


No 49 
>>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A (A:1-182)
Probab=26.82  E-value=24  Score=15.41  Aligned_cols=15  Identities=20%  Similarity=0.386  Sum_probs=11.4

Q ss_pred             CCCEEEEEECCCHHH
Q ss_conf             766899981585389
Q gi|254780663|r   93 NVEHIVVMGHGRCGG  107 (207)
Q Consensus        93 ~v~~iiV~GHt~CGa  107 (207)
                      +-+.|+++|+++||=
T Consensus         3 ~G~~i~liG~sGsGK   17 (182)
T 3a4m_A            3 DIMLIILTGLPGVGK   17 (182)
T ss_dssp             CCEEEEEECCTTSSH
T ss_pred             CCEEEEEECCCCCCH
T ss_conf             977998889999989


No 50 
>>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} (A:58-108)
Probab=26.68  E-value=23  Score=15.58  Aligned_cols=17  Identities=18%  Similarity=0.188  Sum_probs=13.1

Q ss_pred             EEEEEECCCCEEEEEEC
Q ss_conf             99999889876999846
Q gi|254780663|r  181 HGAWFDISSGKLWILDP  197 (207)
Q Consensus       181 ~G~~yDi~tG~v~~l~~  197 (207)
                      .=|+||++|+.+..+++
T Consensus        34 ~Y~iydi~t~~~~~l~~   50 (51)
T 1z68_A           34 TYYIYDLSNGEFVRGNE   50 (51)
T ss_dssp             EEEEEETTTTEECCSSC
T ss_pred             EEEEEECCCCCEEECCC
T ss_conf             29999899996886677


No 51 
>>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A* (A:)
Probab=26.45  E-value=26  Score=15.18  Aligned_cols=15  Identities=0%  Similarity=0.069  Sum_probs=7.6

Q ss_pred             CCCCEEEEEECCCCC
Q ss_conf             899759999626789
Q gi|254780663|r   31 QQKPKIMIISCCDSR   45 (207)
Q Consensus        31 ~q~P~~~vitC~DsR   45 (207)
                      ...+.++++|=..+.
T Consensus        34 ~~~~~v~ivG~~~~G   48 (262)
T 3def_A           34 MNSMTVLVLGKGGVG   48 (262)
T ss_dssp             CCEEEEEEEECTTSS
T ss_pred             CCCCEEEEECCCCCC
T ss_conf             887389998999987


No 52 
>>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A (A:1-168,A:240-278)
Probab=25.88  E-value=27  Score=15.09  Aligned_cols=21  Identities=5%  Similarity=-0.084  Sum_probs=9.4

Q ss_pred             HHHHHHHCCCCCEEEEEECCC
Q ss_conf             877672205766899981585
Q gi|254780663|r   84 AIEFAVQGLNVEHIVVMGHGR  104 (207)
Q Consensus        84 sle~av~~l~v~~iiV~GHt~  104 (207)
                      .+...+...+++.|+|+=.-|
T Consensus       125 ~~~~~l~~~~iPiiVviNKiD  145 (207)
T 2h5e_A          125 KLMEVTRLRDTPILTFMNKLD  145 (207)
T ss_dssp             HHHHHHTTTTCCEEEEEECTT
T ss_pred             HHHHHHHHHCCCEEEEEEEEC
T ss_conf             889999862664376532104


No 53 
>>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A (A:1-63)
Probab=25.79  E-value=41  Score=13.96  Aligned_cols=27  Identities=19%  Similarity=0.294  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHCC--CCHHHHHHHHCCC
Q ss_conf             99999999997068--7988999862389
Q gi|254780663|r    6 NTLLERHREFIQDQ--YDKKLFQELANQQ   32 (207)
Q Consensus         6 ~~Ll~~N~~f~~~~--~~~~~~~~l~~~q   32 (207)
                      .+.++||+-|++..  ..|++.....+||
T Consensus        35 revlegnrywarkvtseepefmaeqvkgq   63 (63)
T 2w3q_A           35 REVLEGNRYWARKVTSEEPEFMAEQVKGQ   63 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHCCC
T ss_conf             99999999999750310978999863799


No 54 
>>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell membrane, GTP-binding, ION transport; 2.50A {Legionella pneumophila} (A:1-169,A:253-256)
Probab=25.55  E-value=31  Score=14.70  Aligned_cols=11  Identities=36%  Similarity=1.087  Sum_probs=4.2

Q ss_pred             EEEEEECCCHH
Q ss_conf             89998158538
Q gi|254780663|r   96 HIVVMGHGRCG  106 (207)
Q Consensus        96 ~iiV~GHt~CG  106 (207)
                      .|+++||++||
T Consensus         3 kI~iiG~~~vG   13 (173)
T 3iby_A            3 HALLIGNPNCG   13 (173)
T ss_dssp             EEEEEESTTSS
T ss_pred             EEEEECCCCCC
T ss_conf             89998999968


No 55 
>>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase; 2.10A {Mycobacterium tuberculosis} (A:1-50,A:103-207)
Probab=25.30  E-value=33  Score=14.55  Aligned_cols=20  Identities=15%  Similarity=0.109  Sum_probs=15.0

Q ss_pred             HHCCCCCEEEEEECCCHHHH
Q ss_conf             22057668999815853898
Q gi|254780663|r   89 VQGLNVEHIVVMGHGRCGGI  108 (207)
Q Consensus        89 v~~l~v~~iiV~GHt~CGav  108 (207)
                      +..-.-+.+.++|+|+||=-
T Consensus        15 ~~i~~g~~~~~~GpsG~GKs   34 (155)
T 1znw_A           15 QPAAVGRVVVLSGPSAVGKS   34 (155)
T ss_dssp             ----CCCEEEEECSTTSSHH
T ss_pred             CCCCCCCEEEEECCCCCCHH
T ss_conf             98878808999898999999


No 56 
>>1zun_B Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae PV} (B:1-238)
Probab=24.80  E-value=30  Score=14.87  Aligned_cols=12  Identities=8%  Similarity=0.166  Sum_probs=6.7

Q ss_pred             EEEEEECCCCCC
Q ss_conf             599996267899
Q gi|254780663|r   35 KIMIISCCDSRV   46 (207)
Q Consensus        35 ~~~vitC~DsRv   46 (207)
                      -++++|..|+.=
T Consensus        26 ni~viGHvd~GK   37 (238)
T 1zun_B           26 RFLTCGNVDDGK   37 (238)
T ss_dssp             EEEEECCTTSSH
T ss_pred             EEEEEEECCCCH
T ss_conf             699995348208


No 57 
>>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12} (A:)
Probab=24.70  E-value=43  Score=13.84  Aligned_cols=29  Identities=14%  Similarity=0.227  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             25788877672205766899981585389
Q gi|254780663|r   79 HATSAAIEFAVQGLNVEHIVVMGHGRCGG  107 (207)
Q Consensus        79 ~~~~~sle~av~~l~v~~iiV~GHt~CGa  107 (207)
                      ...+..|.--+....-..|.|.||||.-+
T Consensus        50 ~~~L~~ia~~L~~~p~~~i~I~Ghtd~~g   78 (149)
T 2k1s_A           50 ANTLTGVAMVLKEYPKTAVNVIGYTDSTG   78 (149)
T ss_dssp             HHHHHHHHHHHHHCTTEEEEEEEECCCTT
T ss_pred             HHHHHHHHHHHHCCCCCCEEECCCCCCCC
T ss_conf             99999887777318875201022413544


No 58 
>>1orv_A Dipeptidyl peptidase IV; serine protease, mechanism, oxyanion HOLE, substrate channeling, drug design, diabetes mellitus, hydrolase; HET: NAG BMA; 1.80A {Sus scrofa} (A:58-110)
Probab=24.38  E-value=27  Score=15.13  Aligned_cols=17  Identities=12%  Similarity=0.167  Sum_probs=12.6

Q ss_pred             EEEEEECCCCEEEEEEC
Q ss_conf             99999889876999846
Q gi|254780663|r  181 HGAWFDISSGKLWILDP  197 (207)
Q Consensus       181 ~G~~yDi~tG~v~~l~~  197 (207)
                      .=|+||++||.+.-+++
T Consensus        36 ~Y~iydi~t~~~~~l~~   52 (53)
T 1orv_A           36 SYDIYDLNKRQLITEER   52 (53)
T ss_dssp             EEEEEETTTTEECCSSC
T ss_pred             EEEEEECCCCCCCCCCC
T ss_conf             19999899997834557


No 59 
>>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} (A:)
Probab=24.30  E-value=43  Score=13.79  Aligned_cols=27  Identities=19%  Similarity=0.352  Sum_probs=21.1

Q ss_pred             EEEEEECCCCEEEEEECCCCEEEECCC
Q ss_conf             999998898769998468882583359
Q gi|254780663|r  181 HGAWFDISSGKLWILDPTSNEFTCDTR  207 (207)
Q Consensus       181 ~G~~yDi~tG~v~~l~~~~~~F~~~~~  207 (207)
                      |..=.-++.|.|.+|||..+.|++++.
T Consensus       132 Hava~~~~~~~vtfFDPNfGEF~~~s~  158 (188)
T 1ukf_A          132 HAIACSCEGSQFKLFDPNLGEFQSSRS  158 (188)
T ss_dssp             EEEEEEEETTEEEEEETTTEEEEEETT
T ss_pred             EEEEEEECCCEEEEECCCCCCEECCHH
T ss_conf             279998669907998899872566706


No 60 
>>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis} (A:1-167)
Probab=24.24  E-value=34  Score=14.49  Aligned_cols=15  Identities=13%  Similarity=0.346  Sum_probs=10.9

Q ss_pred             CCCEEEEEECCCHHH
Q ss_conf             766899981585389
Q gi|254780663|r   93 NVEHIVVMGHGRCGG  107 (207)
Q Consensus        93 ~v~~iiV~GHt~CGa  107 (207)
                      |-+.|+++|+++||=
T Consensus         2 ~k~~I~iiG~~nvGK   16 (167)
T 2hjg_A            2 GKPVVAIVGRPNVGK   16 (167)
T ss_dssp             -CCEEEEECSTTSSH
T ss_pred             CCCEEEEECCCCCCH
T ss_conf             989999998999989


No 61 
>>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein/lipoprotein complex; 1.50A {Escherichia coli} (H:)
Probab=23.81  E-value=44  Score=13.73  Aligned_cols=33  Identities=15%  Similarity=0.086  Sum_probs=21.1

Q ss_pred             CCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             753025788877672205766899981585389
Q gi|254780663|r   75 DGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG  107 (207)
Q Consensus        75 ~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa  107 (207)
                      .......+..+.-.+....--.|.|.||||+.+
T Consensus        18 ~~~~~~~L~~ia~~l~~~p~~~i~I~Ghtd~~g   50 (118)
T 2hqs_H           18 RSDFAQMLDAHANFLRSNPSYKVTVEGHADERG   50 (118)
T ss_dssp             CGGGHHHHHHHHHHHHHCTTCCEEEEECCCSSS
T ss_pred             CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             988999999999999769994899984233232


No 62 
>>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A (A:1-173)
Probab=23.57  E-value=28  Score=15.04  Aligned_cols=11  Identities=18%  Similarity=0.471  Sum_probs=5.3

Q ss_pred             EEEEEECCCHH
Q ss_conf             89998158538
Q gi|254780663|r   96 HIVVMGHGRCG  106 (207)
Q Consensus        96 ~iiV~GHt~CG  106 (207)
                      .|+++||++||
T Consensus         7 ki~iiG~~~vG   17 (173)
T 3a1s_A            7 KVALAGCPNVG   17 (173)
T ss_dssp             EEEEECCTTSS
T ss_pred             EEEEECCCCCC
T ss_conf             89999999998


No 63 
>>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} (A:1-221,A:270-352)
Probab=23.26  E-value=31  Score=14.70  Aligned_cols=66  Identities=11%  Similarity=0.092  Sum_probs=32.8

Q ss_pred             CCCEEEEEECCCC-CCCHHHHHCCCCCCEEE--EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             9975999962678-99888851788662488--8624223457777753025788877672205766899981585389
Q gi|254780663|r   32 QKPKIMIISCCDS-RVAPETIFNAKPGELFV--VRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG  107 (207)
Q Consensus        32 q~P~~~vitC~Ds-Rv~~~~i~~~~~Gd~fv--~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa  107 (207)
                      +..++-++-|--- ....+.+.++..-|.-+  +--..++-          .-...+-..+...+.+.|+++=.-|.-.
T Consensus        96 ~~~~i~iiDtPGH~dF~~~~~~~l~~~D~ailVIdA~~Gv~----------~qT~~~l~~~~~~~~p~IV~INKiD~~~  164 (304)
T 1n0u_A           96 NSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVC----------VQTETVLRQALGERIKPVVVINKVDRAL  164 (304)
T ss_dssp             SEEEEEEECCCCCCSSCHHHHHHHHTCSEEEEEEETTTBSC----------HHHHHHHHHHHHTTCEEEEEEECHHHHH
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCC----------HHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             87599998599962259999999998785899996899946----------8699999999875989699997974699


No 64 
>>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} (A:)
Probab=23.18  E-value=46  Score=13.65  Aligned_cols=56  Identities=13%  Similarity=0.093  Sum_probs=35.3

Q ss_pred             CEEEEECCCC--CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             2488862422--3457777753025788877672205766899981585389887530
Q gi|254780663|r   58 ELFVVRNVAN--IVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        58 d~fv~RnaGn--~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      .++.+--.|.  --.+.............++.-+..++.+.++++|||-=|.+...+.
T Consensus        95 ~v~~~D~~G~G~S~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a  152 (306)
T 2r11_A           95 RTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDNLGIEKSHXIGLSLGGLHTXNFL  152 (306)
T ss_dssp             EEEEECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHH
T ss_pred             EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf             8999857645566544666788999988764122343102210012332323320234


No 65 
>>2zf8_A MOTY, component of sodium-driven polar flagellar motor; beta barrel, 2-layer sandwich, flagellum, structural protein; 2.85A {Vibrio alginolyticus} (A:155-278)
Probab=22.84  E-value=46  Score=13.61  Aligned_cols=15  Identities=7%  Similarity=0.182  Sum_probs=12.5

Q ss_pred             CCCEEEEEECCCHHH
Q ss_conf             766899981585389
Q gi|254780663|r   93 NVEHIVVMGHGRCGG  107 (207)
Q Consensus        93 ~v~~iiV~GHt~CGa  107 (207)
                      +.+.|.|.||||..+
T Consensus        39 ~~~~I~I~Ghtd~~g   53 (124)
T 2zf8_A           39 DIDLVLVATYTDSTD   53 (124)
T ss_dssp             SCCEEEEEEC-----
T ss_pred             CCCEEEEEEECCCCC
T ss_conf             965899998748999


No 66 
>>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} (A:1-88,A:178-264)
Probab=22.30  E-value=33  Score=14.54  Aligned_cols=86  Identities=14%  Similarity=0.028  Sum_probs=37.6

Q ss_pred             CEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH--CCHHHHHH
Q ss_conf             6899981585389887530000134633101468988889999864016324687999999999999973--09788999
Q gi|254780663|r   95 EHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIR--NFPFVNKL  172 (207)
Q Consensus        95 ~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~~L~--~~p~i~~~  172 (207)
                      -.|.+++|+.+=          .+.-.-...+......++....+..... .+............++...  ....|+++
T Consensus         4 i~v~~v~HsH~D----------~g~w~~~~ee~~~k~~~~~l~ll~~~p~-~kF~~~~s~~llew~~~~~Pe~~~~lk~l   72 (175)
T 1k1x_A            4 INFIFGIHNHQP----------LGNFGWVFEEAYNRSYRPFMEILEEFPE-MKVNVHFSGPLLEWIEENKPDYLDLLRSL   72 (175)
T ss_dssp             EEEEEEEEECCC----------TTCCHHHHHHHHHHTHHHHHHHHTTCTT-CCEEEEECHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EEEEEEEECCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEECHHHHHHHHHHCHHHHHHHHHH
T ss_conf             999999976789----------9877389999999999999999985899-61999927999999997698999999999


Q ss_pred             HHCCCCEEEEEEEECCCCE
Q ss_conf             9779967999999889876
Q gi|254780663|r  173 EKEHMLQIHGAWFDISSGK  191 (207)
Q Consensus       173 v~~g~l~I~G~~yDi~tG~  191 (207)
                      +++|++.+.|..|--.+..
T Consensus        73 v~~Gr~Eivgg~~ve~~~~   91 (175)
T 1k1x_A           73 IKRGQLEIVVAGFYEPDEK   91 (175)
T ss_dssp             HHTTCEEEEBCCTTCCCHH
T ss_pred             HHCCCEEEECCCCCCCCHH
T ss_conf             9879989987764022721


No 67 
>>1dar_A EF-G, elongation factor G; ribosomal translocase, translational GTPase; HET: GDP; 2.40A {Thermus thermophilus HB8} (A:1-283)
Probab=22.15  E-value=33  Score=14.55  Aligned_cols=65  Identities=15%  Similarity=0.118  Sum_probs=31.2

Q ss_pred             CCEEEEEECCCCCC-CHHHHHCCC--CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             97599996267899-888851788--6624888624223457777753025788877672205766899981585389
Q gi|254780663|r   33 KPKIMIISCCDSRV-APETIFNAK--PGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG  107 (207)
Q Consensus        33 ~P~~~vitC~DsRv-~~~~i~~~~--~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa  107 (207)
                      ..++.++-|--.+- ..+...++.  -|=+||+--..++-          .....+.......+.+.|+|+=.-|+-.
T Consensus        76 ~~~~~~iDtPGh~df~~~~~~~l~~~D~ailVvda~~G~~----------~qt~~~~~~~~~~~~p~ii~iNKiD~~~  143 (283)
T 1dar_A           76 DHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVE----------PQSETVWRQAEKYKVPRIAFANKMDKTG  143 (283)
T ss_dssp             TEEEEEECCCSSTTCHHHHHHHHHHCSEEEEEEETTTCSC----------HHHHHHHHHHHHTTCCEEEEEECTTSTT
T ss_pred             CEEEEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCC----------HHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             9899999298965318999999987186899997898862----------7799999999974998499986346455


No 68 
>>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis} (A:168-353)
Probab=22.02  E-value=36  Score=14.29  Aligned_cols=11  Identities=18%  Similarity=0.576  Sum_probs=4.1

Q ss_pred             EEEEEECCCHH
Q ss_conf             89998158538
Q gi|254780663|r   96 HIVVMGHGRCG  106 (207)
Q Consensus        96 ~iiV~GHt~CG  106 (207)
                      .|+++||+++|
T Consensus        10 ~v~iiG~~~vG   20 (186)
T 2hjg_A           10 QFCLIGRPNVG   20 (186)
T ss_dssp             EEEEECSTTSS
T ss_pred             EEEEECCCCCC
T ss_conf             79998799988


No 69 
>>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A* (A:)
Probab=21.99  E-value=36  Score=14.34  Aligned_cols=12  Identities=25%  Similarity=0.534  Sum_probs=7.3

Q ss_pred             CEEEEEECCCHH
Q ss_conf             689998158538
Q gi|254780663|r   95 EHIVVMGHGRCG  106 (207)
Q Consensus        95 ~~iiV~GHt~CG  106 (207)
                      -.|+++||++||
T Consensus         4 ~kv~iiG~~~vG   15 (165)
T 2wji_A            4 YEIALIGNPNVG   15 (165)
T ss_dssp             EEEEEECSTTSS
T ss_pred             EEEEEECCCCCC
T ss_conf             199999899998


No 70 
>>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* (A:172-364)
Probab=21.90  E-value=40  Score=14.00  Aligned_cols=12  Identities=33%  Similarity=0.504  Sum_probs=5.3

Q ss_pred             CEEEEEECCCCC
Q ss_conf             759999626789
Q gi|254780663|r   34 PKIMIISCCDSR   45 (207)
Q Consensus        34 P~~~vitC~DsR   45 (207)
                      +.++++|.+++.
T Consensus         9 ~~V~iiG~~~vG   20 (193)
T 2qtf_A            9 PSIGIVGYTNSG   20 (193)
T ss_dssp             CEEEEECBTTSS
T ss_pred             CEEEEEECCCCH
T ss_conf             669998345401


No 71 
>>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} (A:)
Probab=21.65  E-value=49  Score=13.45  Aligned_cols=36  Identities=14%  Similarity=0.158  Sum_probs=28.8

Q ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             025788877672205766899981585389887530
Q gi|254780663|r   78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      .......+...+..++.+.++++|||-.|++...+.
T Consensus       117 ~~~~~~~~~~~l~~l~~~~~~lvG~S~Gg~~a~~~a  152 (300)
T 1kez_A          117 AAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALA  152 (300)
T ss_dssp             HHHHHHHHHHHHHHCSSCCEEEECCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
T ss_conf             999999999999857999889999774079999999


No 72 
>>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens} (A:)
Probab=21.41  E-value=49  Score=13.42  Aligned_cols=24  Identities=17%  Similarity=0.260  Sum_probs=21.1

Q ss_pred             CCEEEEEEEECCCCEEEEEECCCC
Q ss_conf             967999999889876999846888
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWILDPTSN  200 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l~~~~~  200 (207)
                      ....+|...|.+.|.|.|+|.+++
T Consensus       132 ~~~rvGV~LD~e~G~lsFy~v~~~  155 (193)
T 3kb5_A          132 RPTRIGLYLSFGDGVLSFYDASDA  155 (193)
T ss_dssp             CCSEEEEEEETTTTEEEEEECCST
T ss_pred             CCCEEEEEEECCCCEEEEEECCCC
T ss_conf             988999998778999999957588


No 73 
>>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} (A:1-277)
Probab=21.32  E-value=38  Score=14.14  Aligned_cols=13  Identities=8%  Similarity=0.041  Sum_probs=5.7

Q ss_pred             EEEEECCCCCCCH
Q ss_conf             9999626789988
Q gi|254780663|r   36 IMIISCCDSRVAP   48 (207)
Q Consensus        36 ~~vitC~DsRv~~   48 (207)
                      ++|+.|.+...+.
T Consensus       102 ilVvda~~g~~~q  114 (277)
T 2dy1_A          102 LVAVSAEAGVQVG  114 (277)
T ss_dssp             EEEEETTTCSCHH
T ss_pred             EEEEECCCCCCHH
T ss_conf             9999789886277


No 74 
>>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} (A:332-428,A:499-582)
Probab=21.29  E-value=43  Score=13.84  Aligned_cols=106  Identities=6%  Similarity=0.063  Sum_probs=46.6

Q ss_pred             HCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC-CC--CHH-HHHH--HHHHHHHH-------------HHHCCCHHHHHH
Q ss_conf             20576689998158538988753000013463-31--014-6898--88899998-------------640163246879
Q gi|254780663|r   90 QGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSP-GD--FIG-KWMD--IVRPIAQK-------------IVANNPTEKQTI  150 (207)
Q Consensus        90 ~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~-~~--~~~-~~~~--~~~~~~~~-------------~~~~~~~~~~~~  150 (207)
                      ..-.-+.+.|+|+++||=-+.+ ........+ .+  ++. .-+.  ..+.....             +--+.|....+.
T Consensus        34 ~i~~Ge~vaivG~sGsGKSTll-~~l~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LP~ililDEPts~LD~  112 (181)
T 3b60_A           34 KIPAGKTVALVGRSGSGKSTIA-SLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLSPILILDEATSALDT  112 (181)
T ss_dssp             EECTTCEEEEEECTTSSHHHHH-HHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSEEEEETTTSSCCH
T ss_pred             EECCCEEEEEECCCCCCHHHHH-HHHHCCCCCCCEEEEECCEECCCCCHHHHHHHEEEEECCCEECCEEEEECCCCCCCH
T ss_conf             9837859999899998799999-998177668970899999984408999997438999257875998999797557998


Q ss_pred             HHHHHHHHHHHHHHCC-HHH--HHHHHCCCCEEEEEEEECCCCEEEEEECC
Q ss_conf             9999999999997309-788--99997799679999998898769998468
Q gi|254780663|r  151 LEQLSIRNSLKNIRNF-PFV--NKLEKEHMLQIHGAWFDISSGKLWILDPT  198 (207)
Q Consensus       151 l~~~nV~~~v~~L~~~-p~i--~~~v~~g~l~I~G~~yDi~tG~v~~l~~~  198 (207)
                      ..+..+.+.+..+.+. .+|  .-.+.  .+...--++-++.|++.....-
T Consensus       113 ~~~~~i~~~l~~l~~~~Tvi~vtH~l~--~~~~~Dri~vl~~G~i~~~g~~  161 (181)
T 3b60_A          113 ESERAIQAALDELQKNRTSLVIAHRLS--TIEQADEIVVVEDGIIVERGTH  161 (181)
T ss_dssp             HHHHHHHHHHHHHHTTSEEEEECSCGG--GTTTCSEEEEEETTEEEEEECH
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCHH--HHHHCCEEEEEECCEEEEECCH
T ss_conf             999999999999759998999928999--9986999999989999998788


No 75 
>>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome assembly, GTP-binding; HET: GNP; 1.90A {Aquifex aeolicus} (A:1-190,A:295-308)
Probab=20.51  E-value=35  Score=14.37  Aligned_cols=25  Identities=20%  Similarity=0.053  Sum_probs=15.1

Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf             8887767220576689998158538
Q gi|254780663|r   82 SAAIEFAVQGLNVEHIVVMGHGRCG  106 (207)
Q Consensus        82 ~~sle~av~~l~v~~iiV~GHt~CG  106 (207)
                      ...+++.....+.+.++|+-..|-.
T Consensus       111 ~~~~~~~~~~~~~~~i~v~nK~D~~  135 (204)
T 3iev_A          111 EEIYQNFIKPLNKPVIVVINKIDKI  135 (204)
T ss_dssp             HHHHHHHTGGGCCCEEEEEECGGGS
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             8999999998399889999701444


No 76 
>>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} (A:)
Probab=20.37  E-value=43  Score=13.79  Aligned_cols=14  Identities=21%  Similarity=0.432  Sum_probs=9.9

Q ss_pred             CCEEEEEECCCHHH
Q ss_conf             66899981585389
Q gi|254780663|r   94 VEHIVVMGHGRCGG  107 (207)
Q Consensus        94 v~~iiV~GHt~CGa  107 (207)
                      ...|+++||+++|=
T Consensus         4 ~~kI~iiG~~~vGK   17 (172)
T 2gj8_A            4 GXKVVIAGRPNAGK   17 (172)
T ss_dssp             CEEEEEEESTTSSH
T ss_pred             CCEEEEECCCCCCH
T ss_conf             76899999999989


No 77 
>>1gg4_A UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase...; alpha/beta sheet; 2.30A {Escherichia coli} (A:1-81)
Probab=20.34  E-value=40  Score=13.99  Aligned_cols=20  Identities=35%  Similarity=0.481  Sum_probs=14.2

Q ss_pred             EECCCCCCCHHHHHCCCCCCEEEEECC
Q ss_conf             962678998888517886624888624
Q gi|254780663|r   39 ISCCDSRVAPETIFNAKPGELFVVRNV   65 (207)
Q Consensus        39 itC~DsRv~~~~i~~~~~Gd~fv~Rna   65 (207)
                      ==|.|||       ...+|++|+-..-
T Consensus        26 ~i~~DSR-------~v~~g~lFval~G   45 (81)
T 1gg4_A           26 AVTTDTR-------KLTPGCLFVALKG   45 (81)
T ss_dssp             CEESCGG-------GCCTTCEEECCBC
T ss_pred             EEEECCC-------CCCCCCEEEEECC
T ss_conf             4796267-------7788989999377


No 78 
>>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} (A:69-265)
Probab=20.13  E-value=45  Score=13.72  Aligned_cols=62  Identities=10%  Similarity=0.093  Sum_probs=33.0

Q ss_pred             CEEEEEECCCC---CCC-HHHHHC--CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf             75999962678---998-888517--8866248886242234577777530257888776722057668999815853
Q gi|254780663|r   34 PKIMIISCCDS---RVA-PETIFN--AKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRC  105 (207)
Q Consensus        34 P~~~vitC~Ds---Rv~-~~~i~~--~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~C  105 (207)
                      +.+.++-+..-   .-. .+.+..  ..-++++++......-          ....-..--+...+.+.|+|+-+-|.
T Consensus        52 ~~i~liDTPG~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~----------~~~~~~~~~l~~~~~p~ivv~NK~D~  119 (197)
T 1tq4_A           52 PNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFK----------KNDIDIAKAISMMKKEFYFVRTKVDS  119 (197)
T ss_dssp             TTEEEEECCCGGGSSCCHHHHHHHTTGGGCSEEEEEESSCCC----------HHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             CCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCC----------HHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             876999788887444349999998775417689997588887----------78999999999739988999758764


No 79 
>>1l2t_A Hypothetical ABC transporter ATP-binding protein MJ0796; ABC transporters, ATPase, walker-A, NBD, transport protein; HET: ATP; 1.90A {Methanocaldococcus jannaschii} (A:)
Probab=20.03  E-value=44  Score=13.73  Aligned_cols=16  Identities=25%  Similarity=0.397  Sum_probs=10.1

Q ss_pred             CCCCEEEEEECCCHHH
Q ss_conf             5766899981585389
Q gi|254780663|r   92 LNVEHIVVMGHGRCGG  107 (207)
Q Consensus        92 l~v~~iiV~GHt~CGa  107 (207)
                      -.-+.+.|+|+|+||=
T Consensus        29 ~~Ge~vaiiGpSGsGK   44 (235)
T 1l2t_A           29 KEGEFVSIMGPSGSGK   44 (235)
T ss_dssp             CTTCEEEEECSTTSSH
T ss_pred             CCCCEEEEECCCCCCH
T ss_conf             7998999999999819


Done!