HHsearch results for GI: 254780663 and protein with PDBid: 1ylk_A
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in europe, spine, structural genomics; 2.00A {Mycobacterium tuberculosis H37RV}
Probab=100.00 E-value=3.6e-44 Score=305.45 Aligned_cols=163 Identities=21% Similarity=0.341 Sum_probs=132.1
Q ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf 74699999999999706879889998623899759999626789988885178866248886242234577777530257
Q gi|254780663|r 2 TSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHAT 81 (207)
Q Consensus 2 ~~~~~~Ll~~N~~f~~~~~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~ 81 (207)
.+++|+|+++|++|+++++. .++.+|+|+++||||||||++|+.+||++|||+|++||+||+|+ .++
T Consensus 10 ~t~~d~ll~~N~~~~~~~~~-----~l~~~q~p~~~vi~CsDSRv~pe~if~~~~Gd~fvvRnaGn~v~--------~~~ 76 (172)
T 1ylk_A 10 GTVTDDYLANNVDYASGFKG-----PLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT--------DDV 76 (172)
T ss_dssp CCHHHHHHHHHHHHHHTCCC-----CCCSSCTTCEEEEEECCTTCCHHHHHTCCTTSEEEEEETTSCCC--------HHH
T ss_pred CCHHHHHHHHHHHHHHHCCC-----CCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCC--------HHH
T ss_conf 42899999999999964867-----78888898469999558897999983999975899985444699--------677
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88877672205766899981585389887530000134633101468988889999864016324687999999999999
Q gi|254780663|r 82 SAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLK 161 (207)
Q Consensus 82 ~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~ 161 (207)
++|||||+.+||+++|||||||+|||++++.+...... ... ...............++||++|++
T Consensus 77 ~~sleyav~~L~v~~IvVlGHt~CGav~aa~~~~~~~~-------------~~~--~~~~~~~~~~~~~d~~enV~~~V~ 141 (172)
T 1ylk_A 77 IRSLAISQRLLGTREIILLHHTDCGMLTFTDDDFKRAI-------------QDE--TGIRPTWSPESYPDAVEDVRQSLR 141 (172)
T ss_dssp HHHHHHHHHTTCCCEEEEEEESSCGGGSCCHHHHHHHH-------------HHH--HSCCCSSCCCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHEECCCCEEEEEEECCCCCCCCCHHHHHHHH-------------HHH--HCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 42144440123975899971058665103377776544-------------465--346841223332268999999999
Q ss_pred HHHCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEEC
Q ss_conf 973097889999779967999999889876999846
Q gi|254780663|r 162 NIRNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDP 197 (207)
Q Consensus 162 ~L~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~ 197 (207)
+|+++|+|++ ++.||||+||++||+|+.+.|
T Consensus 142 ~L~~~p~i~~-----~l~I~G~vyDi~TG~v~~V~p 172 (172)
T 1ylk_A 142 RIEVNPFVTK-----HTSLRGFVFDVATGKLNEVTP 172 (172)
T ss_dssp HHHTCTTCCC-----CSEEEEEEECTTTCCEEEECC
T ss_pred HHHHCCCCCC-----CCEEEEEEEECCCCEEEEECC
T ss_conf 9983946367-----978999999899987988379