HHsearch results for GI: 254780663 and protein with PDBid: 1ylk_A

>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in europe, spine, structural genomics; 2.00A {Mycobacterium tuberculosis H37RV}
Probab=100.00  E-value=3.6e-44  Score=305.45  Aligned_cols=163  Identities=21%  Similarity=0.341  Sum_probs=132.1

Q ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf             74699999999999706879889998623899759999626789988885178866248886242234577777530257
Q gi|254780663|r    2 TSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHAT   81 (207)
Q Consensus         2 ~~~~~~Ll~~N~~f~~~~~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~   81 (207)
                      .+++|+|+++|++|+++++.     .++.+|+|+++||||||||++|+.+||++|||+|++||+||+|+        .++
T Consensus        10 ~t~~d~ll~~N~~~~~~~~~-----~l~~~q~p~~~vi~CsDSRv~pe~if~~~~Gd~fvvRnaGn~v~--------~~~   76 (172)
T 1ylk_A           10 GTVTDDYLANNVDYASGFKG-----PLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT--------DDV   76 (172)
T ss_dssp             CCHHHHHHHHHHHHHHTCCC-----CCCSSCTTCEEEEEECCTTCCHHHHHTCCTTSEEEEEETTSCCC--------HHH
T ss_pred             CCHHHHHHHHHHHHHHHCCC-----CCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCC--------HHH
T ss_conf             42899999999999964867-----78888898469999558897999983999975899985444699--------677


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             88877672205766899981585389887530000134633101468988889999864016324687999999999999
Q gi|254780663|r   82 SAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLK  161 (207)
Q Consensus        82 ~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~  161 (207)
                      ++|||||+.+||+++|||||||+|||++++.+......             ...  ...............++||++|++
T Consensus        77 ~~sleyav~~L~v~~IvVlGHt~CGav~aa~~~~~~~~-------------~~~--~~~~~~~~~~~~~d~~enV~~~V~  141 (172)
T 1ylk_A           77 IRSLAISQRLLGTREIILLHHTDCGMLTFTDDDFKRAI-------------QDE--TGIRPTWSPESYPDAVEDVRQSLR  141 (172)
T ss_dssp             HHHHHHHHHTTCCCEEEEEEESSCGGGSCCHHHHHHHH-------------HHH--HSCCCSSCCCCCSCHHHHHHHHHH
T ss_pred             HHHHHHHHEECCCCEEEEEEECCCCCCCCCHHHHHHHH-------------HHH--HCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             42144440123975899971058665103377776544-------------465--346841223332268999999999


Q ss_pred             HHHCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEEC
Q ss_conf             973097889999779967999999889876999846
Q gi|254780663|r  162 NIRNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDP  197 (207)
Q Consensus       162 ~L~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~  197 (207)
                      +|+++|+|++     ++.||||+||++||+|+.+.|
T Consensus       142 ~L~~~p~i~~-----~l~I~G~vyDi~TG~v~~V~p  172 (172)
T 1ylk_A          142 RIEVNPFVTK-----HTSLRGFVFDVATGKLNEVTP  172 (172)
T ss_dssp             HHHTCTTCCC-----CSEEEEEEECTTTCCEEEECC
T ss_pred             HHHHCCCCCC-----CCEEEEEEEECCCCEEEEECC
T ss_conf             9983946367-----978999999899987988379