Query         gi|254780663|ref|YP_003065076.1| carbonate dehydratase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 207
No_of_seqs    125 out of 2127
Neff          7.8 
Searched_HMMs 23785
Date          Tue May 31 18:01:32 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780663.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1ekj_A Beta-carbonic anhydrase 100.0       0       0  381.5  23.2  201    5-206    14-220 (221)
  2 2w3q_A Carbonic anhydrase 2; l 100.0       0       0  370.0  20.4  195    4-204    33-235 (243)
  3 1i6p_A Carbonic anhydrase; met 100.0       0       0  373.5  16.7  195    1-206     1-202 (220)
  4 1ym3_A Carbonic anhydrase (car 100.0       0       0  367.5  19.8  190    5-203    18-213 (215)
  5 1ddz_A Carbonic anhydrase; alp 100.0       0       0  367.8  19.2  188    5-202    36-231 (496)
  6 3eyx_A Carbonic anhydrase; ros 100.0       0       0  364.4  18.5  194    1-200     9-212 (216)
  7 3e3i_A Carbonic anhydrase 2, b 100.0       0       0  361.9  19.2  193    1-204     1-200 (229)
  8 1ddz_A Carbonic anhydrase; alp 100.0       0       0  354.1  17.8  191    5-205   290-488 (496)
  9 1ylk_A Hypothetical protein RV 100.0 3.6E-44       0  305.5  11.5  163    2-197    10-172 (172)
 10 1g5c_A Beta-carbonic anhydrase 100.0 1.8E-43       0  301.0   9.1  166    4-198     2-169 (170)
 11 2hwk_A Helicase NSP2; rossman   77.2     1.5 6.5E-05   22.2   3.0   31  164-200   101-131 (320)
 12 1vkh_A Putative serine hydrola  58.6     8.6 0.00036   17.4   4.1   37   77-113    96-132 (273)
 13 2vh7_A Acylphosphatase-1; hydr  48.6      11 0.00045   16.7   2.8   19  177-195    33-51  (99)
 14 3d89_A Rieske domain-containin  45.5     7.3 0.00031   17.8   1.6   17  179-195    81-97  (157)
 15 1ulr_A Putative acylphosphatas  44.8      13 0.00056   16.1   2.8   19  177-195    27-45  (88)
 16 2fhm_A Probable acylphosphatas  43.9      14 0.00059   16.0   2.8   19  177-195    27-45  (91)
 17 1w2i_A Acylphosphatase; hydrol  42.8      13 0.00053   16.3   2.5   19  177-195    29-47  (91)
 18 1y5e_A Molybdenum cofactor bio  41.4     5.8 0.00024   18.5   0.6   75   31-107    11-86  (169)
 19 2wyh_A Alpha-mannosidase; hydr  40.0     6.8 0.00029   18.0   0.7   13    3-15    121-133 (923)
 20 2bjd_A Acylphosphatase; hypert  39.9      17 0.00071   15.5   2.8   19  177-195    39-57  (101)
 21 1aps_A Acylphosphatase; hydrol  39.6      13 0.00054   16.2   2.1   19  177-195    32-50  (98)
 22 1urr_A CG18505 protein; acylph  37.7      17 0.00072   15.4   2.5   19  177-195    36-54  (102)
 23 2jo6_A Nitrite reductase [NAD(  35.4     7.7 0.00032   17.7   0.4   14  179-192    74-87  (113)
 24 1brt_A Bromoperoxidase A2; hal  35.0      20 0.00084   15.0   3.1   30   80-109    75-105 (277)
 25 2h5e_A Peptide chain release f  32.9      12 0.00052   16.4   1.1   20   25-44    127-146 (529)
 26 1gxu_A Hydrogenase maturation   32.7      14 0.00058   16.0   1.3   23  178-200    33-55  (91)
 27 3dqy_A Toluene 1,2-dioxygenase  31.8     7.8 0.00033   17.6  -0.1   17  178-194    61-77  (106)
 28 1fqt_A Rieske-type ferredoxin   31.4     8.9 0.00037   17.3   0.2   18  178-195    66-83  (112)
 29 2gv1_A Probable acylphosphatas  31.3      12 0.00053   16.3   0.9   18  178-195    30-47  (92)
 30 3lvt_A Glycosyl hydrolase, fam  30.1      11 0.00047   16.6   0.5   14    3-17    102-115 (899)
 31 3c0d_A Putative nitrite reduct  30.0     7.3 0.00031   17.8  -0.5   12  181-192    74-85  (119)
 32 1a88_A Chloroperoxidase L; hal  28.8      25  0.0011   14.3   3.0   79   32-111    20-104 (275)
 33 1mkz_A Molybdenum cofactor bio  28.4      15 0.00065   15.7   1.0   67   32-107     9-83  (172)
 34 1vm9_A Toluene-4-monooxygenase  28.3     8.1 0.00034   17.5  -0.5   15  178-192    63-77  (111)
 35 2qpz_A Naphthalene 1,2-dioxyge  27.8     9.1 0.00038   17.2  -0.3   18  178-195    63-80  (103)
 36 2i7f_A Ferredoxin component of  27.4     6.9 0.00029   18.0  -0.9   15  179-193    65-79  (108)
 37 1f60_A Elongation factor EEF1A  27.2      18 0.00077   15.2   1.2   58   41-100    93-151 (458)
 38 2jza_A Nitrite reductase [NAD(  26.3     9.5  0.0004   17.1  -0.4   11  181-191    73-83  (130)
 39 1svi_A GTP-binding protein YSX  26.3      23 0.00097   14.6   1.6   16   31-46     21-36  (195)
 40 3gce_A Ferredoxin component of  26.2      11 0.00047   16.6  -0.1   17  178-194    72-88  (121)
 41 2de6_D Ferredoxin component of  25.1      12  0.0005   16.4  -0.1   15  179-193    66-80  (115)
 42 3d7r_A Esterase; alpha/beta fo  24.1      31  0.0013   13.8   2.1   35   78-112   147-181 (326)
 43 1ukf_A Avirulence protein AVRP  24.0      31  0.0013   13.8   3.4   27  181-207   132-158 (188)
 44 3ihk_A Thiamin pyrophosphokina  23.9      31  0.0013   13.7   4.8   67   30-106    35-101 (218)
 45 3bvx_A Alpha-mannosidase 2; fa  23.9      13 0.00057   16.1   0.0   15    3-17    177-191 (1045)
 46 1g7s_A Translation initiation   22.7      19  0.0008   15.1   0.6   65   32-104    68-133 (594)
 47 3o4h_A Acylamino-acid-releasin  22.2      33  0.0014   13.5   3.5   34   79-112   421-454 (582)
 48 1zo0_A ODC-AZ, ornithine decar  21.3      35  0.0015   13.4   2.2   63   41-107    24-89  (126)
 49 1gz0_A Hypothetical tRNA/RRNA   20.8      36  0.0015   13.3   4.7   71   21-105    64-142 (253)
 50 3kxp_A Alpha-(N-acetylaminomet  20.2      37  0.0015   13.3   3.1   35   79-113   118-152 (314)
 51 3iij_A Coilin-interacting nucl  20.2      30  0.0013   13.8   1.2   11   96-106    13-23  (180)
 52 1r5b_A Eukaryotic peptide chai  20.1      33  0.0014   13.5   1.4   58   44-105   132-193 (467)

No 1  
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1
Probab=100.00  E-value=0  Score=381.51  Aligned_cols=201  Identities=35%  Similarity=0.598  Sum_probs=180.6

Q ss_pred             HHHHHHHHHHHHHCCC--CHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHH
Q ss_conf             9999999999970687--98899986238997599996267899888851788662488862422345777775302578
Q gi|254780663|r    5 PNTLLERHREFIQDQY--DKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATS   82 (207)
Q Consensus         5 ~~~Ll~~N~~f~~~~~--~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~   82 (207)
                      +++|++||++|+++.+  +|++|++|++||+|+++||||||||++||.+||++|||+||+||+||+|+|++.. ...+++
T Consensus        14 ~e~L~~G~~~f~~~~~~~~~~~~~~la~gQ~P~~~vi~CsDSRv~pe~i~~~~~GdlfvvRNaGN~v~~~d~~-~~~~~~   92 (221)
T 1ekj_A           14 SERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQA-KYAGTG   92 (221)
T ss_dssp             HHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTT-TCHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCC-CCCHHH
T ss_conf             9999999999985766328899999856899846999513658888997278997579986555567976655-431056


Q ss_pred             HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHH
Q ss_conf             887767220576689998158538988753000013463310146898888999986401----6324687999999999
Q gi|254780663|r   83 AAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVAN----NPTEKQTILEQLSIRN  158 (207)
Q Consensus        83 ~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~nV~~  158 (207)
                      ++||||+.+||+++|||||||+||||+++++.........+++..|+..+++........    ...+..+.+++.||+.
T Consensus        93 asleyAv~~L~v~~IvV~GHs~CGav~aa~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~~  172 (221)
T 1ekj_A           93 AAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNA  172 (221)
T ss_dssp             HHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             88998886049507999658873478887754422676731578888851779999875415785788988999999999


Q ss_pred             HHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCEEEECC
Q ss_conf             999973097889999779967999999889876999846888258335
Q gi|254780663|r  159 SLKNIRNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDPTSNEFTCDT  206 (207)
Q Consensus       159 ~v~~L~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~~~~F~~~~  206 (207)
                      |+++|++||+|++++++|+|.|||||||++||+|++|+.+.+.+...|
T Consensus       173 qv~~L~~~p~I~~~v~~g~l~I~G~~YDi~tG~V~~~~~e~g~~~~~~  220 (221)
T 1ekj_A          173 SLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFS  220 (221)
T ss_dssp             HHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCC
T ss_pred             HHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCCC
T ss_conf             999997098999999869948999999878977999824568877876


No 2  
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A
Probab=100.00  E-value=0  Score=370.04  Aligned_cols=195  Identities=26%  Similarity=0.409  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHHHHCCC--CHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf             69999999999970687--9889998623899759999626789988885178866248886242234577777530257
Q gi|254780663|r    4 FPNTLLERHREFIQDQY--DKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHAT   81 (207)
Q Consensus         4 ~~~~Ll~~N~~f~~~~~--~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~   81 (207)
                      -+++|++||++|+++.+  +|++|++|++||+|+++||||||||++||.+||+.|||+||+||+||+|+|.     +.++
T Consensus        33 ~l~~Ll~gN~~f~~~~~~~~~~~f~~la~gQ~P~~lvi~CsDSRv~pe~i~~~~~GdlFVvRNaGN~v~~~-----d~~~  107 (243)
T 2w3q_A           33 EIREVLEGNRYWARKVTSEEPEFMAEQVKGQAPNFLWIGCADSRVPEVTIMARKPGDVFVQRNVANQFKPE-----DDSS  107 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCSEEEEEECCTTCCHHHHTTCCTTSEEEEEEGGGCCCTT-----CHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCC-----CCCH
T ss_conf             99999999999997412109789998737999976999775879899997089995379986016714777-----7626


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             88877672205766899981585389887530000134633101468988889999864016324687999999999999
Q gi|254780663|r   82 SAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLK  161 (207)
Q Consensus        82 ~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~  161 (207)
                      +++||||+.+|||++|||||||+||||+|+++...... ..++...|...+++..............+.++++||+.|++
T Consensus       108 ~asleyAv~~L~v~~IvVlGHt~CGav~Aa~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~NV~~qv~  186 (243)
T 2w3q_A          108 QALLNYAIMNVGVTHVMVVGHTGCGGCIAAFDQPLPTE-ENPGGTPLVRYLEPIIRLKHSLPEGSDVNDLIKENVKMAVK  186 (243)
T ss_dssp             HHHHHHHHHTTCCCEEEEEEETTCHHHHHHHTCCCC------CCSHHHHHTHHHHHHHHHSCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             89999999854977799925877348999873313445-57762169999999999874274465665899999999999


Q ss_pred             HHHCCHHHHHHHHCC------CCEEEEEEEECCCCEEEEEECCCCEEEE
Q ss_conf             973097889999779------9679999998898769998468882583
Q gi|254780663|r  162 NIRNFPFVNKLEKEH------MLQIHGAWFDISSGKLWILDPTSNEFTC  204 (207)
Q Consensus       162 ~L~~~p~i~~~v~~g------~l~I~G~~yDi~tG~v~~l~~~~~~F~~  204 (207)
                      +|+++|+|+++++.+      +|.|||||||++||+|++||.+++.|.-
T Consensus       187 ~L~~~p~I~~a~~~~~~~~~~~l~VhG~vYDi~TG~V~~Ld~~~g~~~~  235 (243)
T 2w3q_A          187 NVVNSPTIQGAWEQARKGEFREVFVHGWLYDLSTGNIVDLNVTQGPHPF  235 (243)
T ss_dssp             HHHTSHHHHHHHHHHHTTSSCCCEEEEEEEETTTTEEEECSCCBCSCC-
T ss_pred             HHHCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCC
T ss_conf             9970989999998543167884289999998899669884788788865


No 3  
>1i6p_A Carbonic anhydrase; metalloenzyme, zinc coordination, PH- dependent activity, MAD phasing, lyase; 2.00A {Escherichia coli} SCOP: c.53.2.1 PDB: 1i6o_A 1t75_A 2esf_A
Probab=100.00  E-value=0  Score=373.46  Aligned_cols=195  Identities=31%  Similarity=0.477  Sum_probs=168.7

Q ss_pred             CCHHHHHHHHHHHHHHHCC--CCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf             9746999999999997068--79889998623899759999626789988885178866248886242234577777530
Q gi|254780663|r    1 MTSFPNTLLERHREFIQDQ--YDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQH   78 (207)
Q Consensus         1 M~~~~~~Ll~~N~~f~~~~--~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~   78 (207)
                      |+.+ ++|++||++|+++.  .+|++|++|++||+|+++||||||||++|+.+||++|||+||+||+||+|+|.+     
T Consensus         1 M~~l-~~Ll~gN~~f~~~~~~~~~~~~~~la~gQ~P~~~vi~CsDSRv~pe~if~~~~GdlFvvRNaGn~v~~~d-----   74 (220)
T 1i6p_A            1 MKDI-DTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD-----   74 (220)
T ss_dssp             -CCH-HHHHHHHHHHHHHHHTTCTTTTHHHHSCCCCSEEEEEETTCSSCHHHHHCCCTTSEEEEEETTCCCCTTC-----
T ss_pred             CCHH-HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCCC-----
T ss_conf             9449-9999999999986132096899986068999559995437798988955999964688850456669853-----


Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH----HHCCCHHHHHHHHHH
Q ss_conf             2578887767220576689998158538988753000013463310146898888999986----401632468799999
Q gi|254780663|r   79 HATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKI----VANNPTEKQTILEQL  154 (207)
Q Consensus        79 ~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~  154 (207)
                      .++++|||||+.+|+|++|||||||+||||+++++....     +....|....++.....    .........+.+++.
T Consensus        75 ~~~~asleyav~~L~v~~IvV~GHt~CGav~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (220)
T 1i6p_A           75 LNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPEL-----GLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCEL  149 (220)
T ss_dssp             HHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHCCCC-----STHHHHHHHHHHHHHHTHHHHTTSCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCC-----CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             237899999999708877999758775066653305545-----553035554489999987651236657788899999


Q ss_pred             HHHHHHHHHHCCHHHHHHHHCC-CCEEEEEEEECCCCEEEEEECCCCEEEECC
Q ss_conf             9999999973097889999779-967999999889876999846888258335
Q gi|254780663|r  155 SIRNSLKNIRNFPFVNKLEKEH-MLQIHGAWFDISSGKLWILDPTSNEFTCDT  206 (207)
Q Consensus       155 nV~~~v~~L~~~p~i~~~v~~g-~l~I~G~~yDi~tG~v~~l~~~~~~F~~~~  206 (207)
                      ||+.|+++|+++|+|++++.++ +|.|||||||++||+|++|+.+++.||..+
T Consensus       150 nV~~qv~~L~~~p~i~~~~~~~~~l~vhG~~ydi~tG~v~~ld~~~~~~e~l~  202 (220)
T 1i6p_A          150 NVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLE  202 (220)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHTTCCCEEEEEEECTTTCCEEECSCCBSSHHHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCCCCCHH
T ss_conf             99999999741939899998299548999999868856999528898734278


No 4  
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbonic dehydratase); Zn protein, structural proteomics in europe, spine; 1.75A {Mycobacterium tuberculosis H37RV} PDB: 2a5v_A
Probab=100.00  E-value=0  Score=367.55  Aligned_cols=190  Identities=28%  Similarity=0.421  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHHCCC-----CHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCH
Q ss_conf             9999999999970687-----98899986238997599996267899888851788662488862422345777775302
Q gi|254780663|r    5 PNTLLERHREFIQDQY-----DKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHH   79 (207)
Q Consensus         5 ~~~Ll~~N~~f~~~~~-----~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~   79 (207)
                      +++|++||+||++++.     .++.+++|++||+|+++||||||||++||.+||++|||+||+||+||+|+        .
T Consensus        18 ~~~L~~GN~rF~~~~~~~~~~~~~~~~~la~gQ~P~a~vi~CsDSRv~pe~if~~~~GdlfvvRnaGn~v~--------~   89 (215)
T 1ym3_A           18 WKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVID--------S   89 (215)
T ss_dssp             HHHHHHHHHHHHHTCCSSGGGC----------CCCSEEEEEETTCSSCHHHHTTCCTTSEEEEEEGGGCCC--------H
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEECCCCCC--------H
T ss_conf             99999999999839766855488999974058998469993247797778753799863799830455568--------6


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             57888776722057668999815853898875300001346331014689888899998640163246879999999999
Q gi|254780663|r   80 ATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNS  159 (207)
Q Consensus        80 ~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~  159 (207)
                      ++++|||||+.+|+|++|||||||+||||+++++.......+.++++.|++.++++..... .++.+..+.++++||+.|
T Consensus        90 ~~~~sleyAv~~L~v~~IvV~GHt~CGav~Aa~~~~~~~~~~~~~i~~~l~~~~~~~~~~~-~~~~~~~~~~~~~NV~~~  168 (215)
T 1ym3_A           90 AVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVLLGR-RDGLSRVDEFEQRHVHET  168 (215)
T ss_dssp             HHHHHHHHHHHTSCCCEEEEEEESSCHHHHHHHHHHHHTSCCSTTHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHHHH
T ss_pred             HHHHEEEEEHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH
T ss_conf             5530115401106867899957964135587662100267750168899998748987643-024014418999999999


Q ss_pred             HHHHHC-CHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCEEE
Q ss_conf             999730-97889999779967999999889876999846888258
Q gi|254780663|r  160 LKNIRN-FPFVNKLEKEHMLQIHGAWFDISSGKLWILDPTSNEFT  203 (207)
Q Consensus       160 v~~L~~-~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~~~~F~  203 (207)
                      +++|++ ||+|++++++|+|.|||||||++||+|+++|...+-||
T Consensus       169 v~~L~~~~p~i~~~v~~g~l~IhG~~Ydi~TG~V~~~d~~~~~~e  213 (215)
T 1ym3_A          169 VAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIGE  213 (215)
T ss_dssp             HHHHHHHCHHHHHHHHHTSCEEEEEEECTTTCCCEEEEEESCCSC
T ss_pred             HHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCC
T ss_conf             999975799999999889958999999878817999978875478


No 5  
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1
Probab=100.00  E-value=0  Score=367.77  Aligned_cols=188  Identities=28%  Similarity=0.464  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHCC--CCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHH
Q ss_conf             999999999997068--798899986238997599996267899888851788662488862422345777775302578
Q gi|254780663|r    5 PNTLLERHREFIQDQ--YDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATS   82 (207)
Q Consensus         5 ~~~Ll~~N~~f~~~~--~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~   82 (207)
                      +++|++||++|+++.  .+|++|++|++||+|+++|||||||||+||.+||++|||+||+||+||+|++.     +.+++
T Consensus        36 ~~~l~~~N~~~~~~~~~~~p~~f~~la~gQ~P~~lvi~CsDSRV~pe~if~~~pGdlFVvRNaGN~v~~~-----d~~~~  110 (496)
T 1ddz_A           36 KSNIFANNEAWRQEMLKQDPEFFNRLANGQSPEYLWIGCADSRVPANQLLDLPAGEVFVHRNIANQCIHS-----DISFL  110 (496)
T ss_dssp             SSHHHHHHHHHHHHHHHHCTTHHHHHHTCCCCSEEEEEETTCSSCHHHHTTCCTTSEEEEEEGGGCCCTT-----CHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEEECCCCCCCC-----CCHHH
T ss_conf             9999999999997413329799998627999976999866879899998199998779987138878886-----51378


Q ss_pred             HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHH
Q ss_conf             887767220576689998158538988753000013463310146898888999986401-----632468799999999
Q gi|254780663|r   83 AAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVAN-----NPTEKQTILEQLSIR  157 (207)
Q Consensus        83 ~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~nV~  157 (207)
                      +|||||+.+|||++|||||||+||||+++++...     .+.+..|+..++++.......     +..++.+.++++||+
T Consensus       111 asleyAv~~L~v~~IVV~GHt~CGav~aa~~~~~-----~~~~~~wl~~i~~~~~~~~~~~~~~~~~~~~~~~l~e~NV~  185 (496)
T 1ddz_A          111 SVLQYAVQYLKVKHILVCGHYGCGGAKAALGDSR-----LGLIDNWLRHIRDVRRMNAKYLDKCKDGDEELNRLIELNVL  185 (496)
T ss_dssp             HHHHHHHHTSCCSEEEEEEETTCHHHHHHHHCCC-----CTHHHHHHHHHHHHHHHTHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCC-----CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             9999999971886799916888841776530554-----42478899988999998776530148978999999999999


Q ss_pred             HHHHHHHCCHHHHHHHHCC-CCEEEEEEEECCCCEEEEEECCCCEE
Q ss_conf             9999973097889999779-96799999988987699984688825
Q gi|254780663|r  158 NSLKNIRNFPFVNKLEKEH-MLQIHGAWFDISSGKLWILDPTSNEF  202 (207)
Q Consensus       158 ~~v~~L~~~p~i~~~v~~g-~l~I~G~~yDi~tG~v~~l~~~~~~F  202 (207)
                      .|+++|+++|+|++++++| +|.|||||||++||+|++|+...+..
T Consensus       186 ~qv~~L~~~p~v~~~~~~g~~l~IhG~vYdi~tG~v~~L~~~~~~~  231 (496)
T 1ddz_A          186 EQVHNVCATSIVQDAWDAGQELTVQGVVYGVGDGKLRDLGVVVNSS  231 (496)
T ss_dssp             HHHHHHHHSHHHHHHHHTTCCCEEEEEEECTTTTCCEEEEEESCCC
T ss_pred             HHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCH
T ss_conf             9999986398989999769953899999977970699766877885


No 6  
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae}
Probab=100.00  E-value=0  Score=364.38  Aligned_cols=194  Identities=24%  Similarity=0.430  Sum_probs=165.7

Q ss_pred             CCHHHHHHHHHHHHHHHCCC--CHHHHHHH-HCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             97469999999999970687--98899986-2389975999962678998888517886624888624223457777753
Q gi|254780663|r    1 MTSFPNTLLERHREFIQDQY--DKKLFQEL-ANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQ   77 (207)
Q Consensus         1 M~~~~~~Ll~~N~~f~~~~~--~~~~~~~l-~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~   77 (207)
                      +++-+++|++||++|+++..  +|++|+++ ++||+|+++|||||||||+|+ +||++|||+||+|||||+|++.     
T Consensus         9 ~~~~l~~Ll~gN~~f~~~~~~~~p~~~~~~~a~gQ~P~~~vi~C~DSRv~~~-i~~~~~GdlfvvRnaGn~v~~~-----   82 (216)
T 3eyx_A            9 HNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNEN-CLGVLPGEVFTWKNVANICHSE-----   82 (216)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHCGGGC--------CCSEEEEEECCTTCCGG-GGCCCTTSEEEEEEGGGCCCTT-----
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCHH-HHCCCCCCEEEEECCCCCCCCC-----
T ss_conf             5059999999999999740210857789987479998579997528896978-9579997578972346767887-----


Q ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCC--CCCCHHHHHHHHHHHHHHHHH-----CCCHHHHHH
Q ss_conf             0257888776722057668999815853898875300001346--331014689888899998640-----163246879
Q gi|254780663|r   78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTS--PGDFIGKWMDIVRPIAQKIVA-----NNPTEKQTI  150 (207)
Q Consensus        78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  150 (207)
                      +.++++|||||+..|+|++|||||||+||||+++++.......  ..+.+..|+..+++.......     ..+.++.+.
T Consensus        83 d~~~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  162 (216)
T 3eyx_A           83 DLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHY  162 (216)
T ss_dssp             CHHHHHHHHHHHHTTCCSEEEEEEESSCHHHHHHHTTCGGGTGGGTCHHHHHHTHHHHHHHHHTHHHHTTCCSHHHHHHH
T ss_pred             CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             70089999999985498789992598750689887524305653343046889999999999988741124777999999


Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCC
Q ss_conf             99999999999973097889999779967999999889876999846888
Q gi|254780663|r  151 LEQLSIRNSLKNIRNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDPTSN  200 (207)
Q Consensus       151 l~~~nV~~~v~~L~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~~~  200 (207)
                      ++++||+.|+++|++||+|++++++|+|.|||||||++||+|++|+++++
T Consensus       163 l~~~NV~~qv~~L~~~p~I~~~v~~g~l~V~G~~YDi~tG~v~~l~~~~~  212 (216)
T 3eyx_A          163 LSHCNVKRQFNRIIENPTVQTAVQNGELQVYGLLYNVEDGLLQTVSTYTK  212 (216)
T ss_dssp             HHHHHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEECTTTCCEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCC
T ss_conf             99999999999997198899999879918999999889857999778878


No 7  
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META binding, zinc; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A
Probab=100.00  E-value=0  Score=361.95  Aligned_cols=193  Identities=30%  Similarity=0.505  Sum_probs=167.0

Q ss_pred             CCHHHHHHHHHHHHHHHCC--CCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf             9746999999999997068--79889998623899759999626789988885178866248886242234577777530
Q gi|254780663|r    1 MTSFPNTLLERHREFIQDQ--YDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQH   78 (207)
Q Consensus         1 M~~~~~~Ll~~N~~f~~~~--~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~   78 (207)
                      |.. +++|++||++|+++.  .+|++|++|++||+|+++||||||||++|+.+||++|||+||+||+||+|+|.     +
T Consensus         1 M~~-l~~Ll~gN~~f~~~~~~~~~~~f~~la~gQ~P~~~vi~C~DSRv~pe~if~~~~GdlFVvRNaGN~v~~~-----d   74 (229)
T 3e3i_A            1 MDK-IKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIACSDSRVPAEKLTNLEPGELFVHRNVANQVIHT-----D   74 (229)
T ss_dssp             CHH-HHHHHHHHHHHHHHHHHC------------CCCEEEEEETTCCSCHHHHHTCCTTSEEEEEETTCCCCTT-----C
T ss_pred             CCH-HHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCC-----C
T ss_conf             946-9999999999997513318789998606899965999876889798895689995468885235558875-----4


Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH----HHHCCCHHHHHHHHHH
Q ss_conf             257888776722057668999815853898875300001346331014689888899998----6401632468799999
Q gi|254780663|r   79 HATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQK----IVANNPTEKQTILEQL  154 (207)
Q Consensus        79 ~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~  154 (207)
                      .++++|||||+.+|||++|||||||+||||+++++....     +....|...+++....    .....+..+.+.+++.
T Consensus        75 ~~~~asleyAv~~L~v~~IvV~GHt~CGav~aa~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (229)
T 3e3i_A           75 FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKDL-----GLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKI  149 (229)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEEEEESSCHHHHHHHSCCCC-----STHHHHHHHHHHHHHHTHHHHHTBCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCC-----CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf             036788888775058656999635787620222214445-----664046777799999876553015838899999999


Q ss_pred             HHHHHHHHHHCCHHHHHHHHCC-CCEEEEEEEECCCCEEEEEECCCCEEEE
Q ss_conf             9999999973097889999779-9679999998898769998468882583
Q gi|254780663|r  155 SIRNSLKNIRNFPFVNKLEKEH-MLQIHGAWFDISSGKLWILDPTSNEFTC  204 (207)
Q Consensus       155 nV~~~v~~L~~~p~i~~~v~~g-~l~I~G~~yDi~tG~v~~l~~~~~~F~~  204 (207)
                      ||+.|+++|+++|+|++++..+ +|+|||||||++||+|..|+...+.||-
T Consensus       150 NV~~qv~~L~~~p~i~~~~~~~~~l~I~G~~YDi~tG~v~~L~~~~~~~e~  200 (229)
T 3e3i_A          150 NVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDGFLVDQGVMATSRET  200 (229)
T ss_dssp             HHHHHHHHHHTSHHHHHHHHTTCCCEEEEEEECTTTCCEEEEEEEESSHHH
T ss_pred             HHHHHHHHHHHCHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCCCC
T ss_conf             999999999709688999983994089999998898569975787786331


No 8  
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1
Probab=100.00  E-value=0  Score=354.13  Aligned_cols=191  Identities=27%  Similarity=0.463  Sum_probs=167.0

Q ss_pred             HHHHHHHHHHHHHCCC--CHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHH
Q ss_conf             9999999999970687--98899986238997599996267899888851788662488862422345777775302578
Q gi|254780663|r    5 PNTLLERHREFIQDQY--DKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATS   82 (207)
Q Consensus         5 ~~~Ll~~N~~f~~~~~--~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~   82 (207)
                      .++++.+|+.|+++.+  +|++|++|++||+|+++||||||||++|+.+||++|||+||+|||||+|++.     +.+++
T Consensus       290 ~~~~~~~n~~~~~~~~~~~p~~f~~la~gQ~P~~lvi~CsDSRv~pe~ifg~~pGdlFVvRNaGN~V~~~-----d~~~l  364 (496)
T 1ddz_A          290 ANRVFVNNENWRQKMLKQDPQFFSNLAHTQTPEILWIGCADSRVPANQIINLPAGEVFVHRNIANQCIHS-----DMSFL  364 (496)
T ss_dssp             SSHHHHHHHHHHHHHHHHCTTHHHHHTTCCCCSEEEEEETTCSSCHHHHTTCCTTSEEEEEETTCCCCTT-----CHHHH
T ss_pred             HHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCC-----CCCHH
T ss_conf             8999873566776553159899998408999967999754879898997199997679987258746876-----65213


Q ss_pred             HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHH
Q ss_conf             887767220576689998158538988753000013463310146898888999986401-----632468799999999
Q gi|254780663|r   83 AAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVAN-----NPTEKQTILEQLSIR  157 (207)
Q Consensus        83 ~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~nV~  157 (207)
                      +|||||+.+|+|++|||||||+||||+++++..     ..+.+..|+..++++.......     .+.+..+.++++||+
T Consensus       365 asleyAv~~L~v~~IvV~GHt~CGav~aa~~~~-----~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~l~e~NV~  439 (496)
T 1ddz_A          365 SVLQYAVQYLKVKRVVVCGHYACGGCAAALGDS-----RLGLIDNWLRHIRDVRRHNQAELSRITDPKDSLNRLIEINVL  439 (496)
T ss_dssp             HHHHHHHHTSCCSEEEEEEETTCHHHHHTTSCC-----CCTTHHHHTHHHHHHHHTTHHHHTTCCSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCC-----CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             458999986199779992799866877103145-----444078999999999998776432358979999999999999


Q ss_pred             HHHHHHHCCHHHHHHHHCC-CCEEEEEEEECCCCEEEEEECCCCEEEEC
Q ss_conf             9999973097889999779-96799999988987699984688825833
Q gi|254780663|r  158 NSLKNIRNFPFVNKLEKEH-MLQIHGAWFDISSGKLWILDPTSNEFTCD  205 (207)
Q Consensus       158 ~~v~~L~~~p~i~~~v~~g-~l~I~G~~yDi~tG~v~~l~~~~~~F~~~  205 (207)
                      .|+++|+++|+|++++.+| +|.||||+||++||+|++++...+.++-.
T Consensus       440 ~qv~~L~~~p~v~~~~~~g~~l~I~G~vydi~tG~v~~l~~~~~~~~~~  488 (496)
T 1ddz_A          440 EQMHNVCATSIVQDAWDAGQELEVQGVVYGVGDGKLRDMGVVAKANDDI  488 (496)
T ss_dssp             HHHHHHHHSHHHHHHHHTTCCCEEEEEEECTTTTCCEEEEEESCCCCCC
T ss_pred             HHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCH
T ss_conf             9999997496777999769962899999988981799971888787688


No 9  
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in europe, spine, structural genomics; 2.00A {Mycobacterium tuberculosis H37RV}
Probab=100.00  E-value=3.6e-44  Score=305.45  Aligned_cols=163  Identities=21%  Similarity=0.341  Sum_probs=132.1

Q ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf             74699999999999706879889998623899759999626789988885178866248886242234577777530257
Q gi|254780663|r    2 TSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHAT   81 (207)
Q Consensus         2 ~~~~~~Ll~~N~~f~~~~~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~   81 (207)
                      .+++|+|+++|++|+++++.     .++.+|+|+++||||||||++|+.+||++|||+|++||+||+|+        .++
T Consensus        10 ~t~~d~ll~~N~~~~~~~~~-----~l~~~q~p~~~vi~CsDSRv~pe~if~~~~Gd~fvvRnaGn~v~--------~~~   76 (172)
T 1ylk_A           10 GTVTDDYLANNVDYASGFKG-----PLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT--------DDV   76 (172)
T ss_dssp             CCHHHHHHHHHHHHHHTCCC-----CCCSSCTTCEEEEEECCTTCCHHHHHTCCTTSEEEEEETTSCCC--------HHH
T ss_pred             CCHHHHHHHHHHHHHHHCCC-----CCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCC--------HHH
T ss_conf             42899999999999964867-----78888898469999558897999983999975899985444699--------677


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             88877672205766899981585389887530000134633101468988889999864016324687999999999999
Q gi|254780663|r   82 SAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLK  161 (207)
Q Consensus        82 ~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~  161 (207)
                      ++|||||+.+||+++|||||||+|||++++.+......             ...  ...............++||++|++
T Consensus        77 ~~sleyav~~L~v~~IvVlGHt~CGav~aa~~~~~~~~-------------~~~--~~~~~~~~~~~~~d~~enV~~~V~  141 (172)
T 1ylk_A           77 IRSLAISQRLLGTREIILLHHTDCGMLTFTDDDFKRAI-------------QDE--TGIRPTWSPESYPDAVEDVRQSLR  141 (172)
T ss_dssp             HHHHHHHHHTTCCCEEEEEEESSCGGGSCCHHHHHHHH-------------HHH--HSCCCSSCCCCCSCHHHHHHHHHH
T ss_pred             HHHHHHHHEECCCCEEEEEEECCCCCCCCCHHHHHHHH-------------HHH--HCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             42144440123975899971058665103377776544-------------465--346841223332268999999999


Q ss_pred             HHHCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEEC
Q ss_conf             973097889999779967999999889876999846
Q gi|254780663|r  162 NIRNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDP  197 (207)
Q Consensus       162 ~L~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~  197 (207)
                      +|+++|+|++     ++.||||+||++||+|+.+.|
T Consensus       142 ~L~~~p~i~~-----~l~I~G~vyDi~TG~v~~V~p  172 (172)
T 1ylk_A          142 RIEVNPFVTK-----HTSLRGFVFDVATGKLNEVTP  172 (172)
T ss_dssp             HHHTCTTCCC-----CSEEEEEEECTTTCCEEEECC
T ss_pred             HHHHCCCCCC-----CCEEEEEEEECCCCEEEEECC
T ss_conf             9983946367-----978999999899987988379


No 10 
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1
Probab=100.00  E-value=1.8e-43  Score=300.96  Aligned_cols=166  Identities=23%  Similarity=0.364  Sum_probs=128.3

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCH--HHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf             699999999999706879889998623899759999626789988--885178866248886242234577777530257
Q gi|254780663|r    4 FPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAP--ETIFNAKPGELFVVRNVANIVPPYEPDGQHHAT   81 (207)
Q Consensus         4 ~~~~Ll~~N~~f~~~~~~~~~~~~l~~~q~P~~~vitC~DsRv~~--~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~   81 (207)
                      ++++|+++|++|+...       ....||+|+++||||||||++|  |.+||++|||+||+||+||+|++        ++
T Consensus         2 ~l~~ll~~n~~~~~~~-------~~~~gq~P~~~vi~C~DsRv~p~~e~i~~~~~Gd~fv~RnaGn~v~~--------~~   66 (170)
T 1g5c_A            2 IIKDILRENQDFRFRD-------LSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVDD--------GV   66 (170)
T ss_dssp             CHHHHHHHHTTCCCCS-------GGGSSSSCCEEEEEECCGGGTTHHHHHHTCCTTSCEEEEETTCCCCH--------HH
T ss_pred             CHHHHHHHHHHHHHHH-------HCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCEEEEECCCCCCCH--------HH
T ss_conf             6799988635130223-------30259998579998647799821778848999737998504777887--------68


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             88877672205766899981585389887530000134633101468988889999864016324687999999999999
Q gi|254780663|r   82 SAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTSPGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLK  161 (207)
Q Consensus        82 ~~sle~av~~l~v~~iiV~GHt~CGav~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nV~~~v~  161 (207)
                      ++||+||+.+||+++|+|||||+|||++++.+.........+.....   +++......  .+.    ..+++||++|++
T Consensus        67 ~~sl~~av~~l~v~~IvV~GHt~CG~v~a~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~----~~~e~nV~~qv~  137 (170)
T 1g5c_A           67 IRSAAVAIYALGDNEIIIVGHTDCGMARLDEDLIVSRMRELGVEEEV---IENFSIDVL--NPV----GDEEENVIEGVK  137 (170)
T ss_dssp             HHHHHHHHHHHCCCEEEEEEESSCCTTSCCHHHHHHHHHHTTCCHHH---HHHHHHHHT--SSC----CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHH---HHHCCCCCC--CCC----CCHHHHHHHHHH
T ss_conf             88999999834987799984557674325878887565441525888---864470303--541----379999999999


Q ss_pred             HHHCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEECC
Q ss_conf             9730978899997799679999998898769998468
Q gi|254780663|r  162 NIRNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDPT  198 (207)
Q Consensus       162 ~L~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~  198 (207)
                      +|++||+|++     ++.|||||||++||+|+.|+.+
T Consensus       138 ~L~~~P~i~~-----~l~V~G~vydi~TG~v~~l~~d  169 (170)
T 1g5c_A          138 RLKSSPLIPE-----SIGVHGLIIDINTGRLKPLYLD  169 (170)
T ss_dssp             HHHHCTTSCT-----TSEEEEEEECTTTCCEEEEECC
T ss_pred             HHHHCCCCCC-----CCEEEEEEEECCCCEEEEECCC
T ss_conf             9982905134-----8789999998899769871799


No 11 
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=77.15  E-value=1.5  Score=22.22  Aligned_cols=31  Identities=26%  Similarity=0.479  Sum_probs=19.5

Q ss_pred             HCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCC
Q ss_conf             3097889999779967999999889876999846888
Q gi|254780663|r  164 RNFPFVNKLEKEHMLQIHGAWFDISSGKLWILDPTSN  200 (207)
Q Consensus       164 ~~~p~i~~~v~~g~l~I~G~~yDi~tG~v~~l~~~~~  200 (207)
                      +.||.++.+++.|+      .+|+.||++..+++..+
T Consensus       101 rryP~~~~a~~~g~------~~di~t~~~~~~~p~~N  131 (320)
T 2hwk_A          101 RRYPQLPRAVATGR------VYDMNTGTLRNYDPRIN  131 (320)
T ss_dssp             TTCTTHHHHHHHTC------EECTTTSSEECCCTTSC
T ss_pred             HHCCHHHHHHCCCE------EEEECCCCCCCCCCCCC
T ss_conf             86854344423772------89843784325886543


No 12 
>1vkh_A Putative serine hydrolase; YDR428C, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=58.62  E-value=8.6  Score=17.35  Aligned_cols=37  Identities=14%  Similarity=0.072  Sum_probs=29.6

Q ss_pred             CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             3025788877672205766899981585389887530
Q gi|254780663|r   77 QHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        77 ~~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      .-.++.+++.+.....+.+.|+++|||--|.+...+.
T Consensus        96 ~~~D~~~a~~~l~~~~~~~~i~l~G~SaGg~lal~~~  132 (273)
T 1vkh_A           96 NLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQIL  132 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
T ss_conf             9999999999875316987538999640899999998


No 13 
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=48.57  E-value=11  Score=16.72  Aligned_cols=19  Identities=16%  Similarity=0.034  Sum_probs=14.5

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        33 ~~~l~G~V~N~~dG~Vei~   51 (99)
T 2vh7_A           33 KLGLVGWVQNTDRGTVQGQ   51 (99)
T ss_dssp             HTTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCCEEEE
T ss_conf             8198899999999919999


No 14 
>3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein structure initiative, PSI; 2.07A {Mus musculus}
Probab=45.45  E-value=7.3  Score=17.81  Aligned_cols=17  Identities=12%  Similarity=0.081  Sum_probs=12.5

Q ss_pred             EEEEEEEECCCCEEEEE
Q ss_conf             79999998898769998
Q gi|254780663|r  179 QIHGAWFDISSGKLWIL  195 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~~l  195 (207)
                      +.|||.||++||++...
T Consensus        81 PyHgw~fdl~tG~~~~~   97 (157)
T 3d89_A           81 PWHKYKITLATGEGLYQ   97 (157)
T ss_dssp             TTTCCEEETTTCEEEEE
T ss_pred             CCCCCEEECCCCCEEEC
T ss_conf             88898998999888671


No 15 
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=44.85  E-value=13  Score=16.12  Aligned_cols=19  Identities=16%  Similarity=0.319  Sum_probs=15.5

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+-++.+|.|+.+
T Consensus        27 ~l~l~G~V~N~~dG~Vei~   45 (88)
T 1ulr_A           27 ELGLSGYAENLPDGRVEVV   45 (88)
T ss_dssp             HTTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCCEEEE
T ss_conf             8099899999999989999


No 16 
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=43.91  E-value=14  Score=15.97  Aligned_cols=19  Identities=21%  Similarity=0.223  Sum_probs=14.2

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        27 ~lgl~G~V~N~~dG~Vei~   45 (91)
T 2fhm_A           27 KRKLAGWVKNRDDGRVEIL   45 (91)
T ss_dssp             HTTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCCEEEE
T ss_conf             8398899999999989999


No 17 
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=42.82  E-value=13  Score=16.26  Aligned_cols=19  Identities=16%  Similarity=0.251  Sum_probs=13.7

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        29 ~l~l~G~V~N~~dG~Vei~   47 (91)
T 1w2i_A           29 KLGVNGWVRNLPDGSVEAV   47 (91)
T ss_dssp             HHTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCEEEEE
T ss_conf             8499899999969979999


No 18 
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=41.44  E-value=5.8  Score=18.47  Aligned_cols=75  Identities=15%  Similarity=0.171  Sum_probs=38.8

Q ss_pred             CCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCC-CHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             89975999962678998888517886624888624223457777753-025788877672205766899981585389
Q gi|254780663|r   31 QQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQ-HHATSAAIEFAVQGLNVEHIVVMGHGRCGG  107 (207)
Q Consensus        31 ~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~-~~~~~~sle~av~~l~v~~iiV~GHt~CGa  107 (207)
                      .+..+++|||+||+|-.-+-..+-..-++  ++..|.-|........ ......++.-+...-+...|+..|=|++|.
T Consensus        11 p~~~~~avitvsD~~~~~~D~nGp~L~~~--l~~~G~~v~~~~iv~Dd~~~i~~~~~~~~~~~~~dvIiT~GGtg~g~   86 (169)
T 1y5e_A           11 PKEVRCKIVTISDTRTEETDKSGQLLHEL--LKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITK   86 (169)
T ss_dssp             -CCCEEEEEEECSSCCTTTCHHHHHHHHH--HHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSST
T ss_pred             CCCCEEEEEEECCCCCCCCCCHHHHHHHH--HHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf             87878999998188887768509999999--99779977898745897999999999998656983899734414775


No 19 
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=40.04  E-value=6.8  Score=18.01  Aligned_cols=13  Identities=15%  Similarity=0.107  Sum_probs=7.6

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             4699999999999
Q gi|254780663|r    3 SFPNTLLERHREF   15 (207)
Q Consensus         3 ~~~~~Ll~~N~~f   15 (207)
                      ++.+.|+.|.+-+
T Consensus       121 slirql~~G~~~~  133 (923)
T 2wyh_A          121 SNVRNMLIGKEDC  133 (923)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999999999


No 20 
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=39.92  E-value=17  Score=15.46  Aligned_cols=19  Identities=21%  Similarity=0.324  Sum_probs=12.7

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+-+..+|.|+.+
T Consensus        39 ~l~l~G~V~N~~dG~Vei~   57 (101)
T 2bjd_A           39 RLGIKGYAKNLPDGSVEVV   57 (101)
T ss_dssp             HTTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCCEEEE
T ss_conf             8599799999999989999


No 21 
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=39.60  E-value=13  Score=16.23  Aligned_cols=19  Identities=16%  Similarity=0.027  Sum_probs=15.5

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+.+..+|.|+.+
T Consensus        32 ~~~l~G~V~N~~dG~Vei~   50 (98)
T 1aps_A           32 KIGVVGWVKNTSKGTVTGQ   50 (98)
T ss_dssp             HHTCEEEEECCTTCEEEEE
T ss_pred             HCCCEEEEEECCCCEEEEE
T ss_conf             7799899999999949999


No 22 
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=37.72  E-value=17  Score=15.44  Aligned_cols=19  Identities=16%  Similarity=0.167  Sum_probs=12.8

Q ss_pred             CCEEEEEEEECCCCEEEEE
Q ss_conf             9679999998898769998
Q gi|254780663|r  177 MLQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       177 ~l~I~G~~yDi~tG~v~~l  195 (207)
                      ++.|.||+-+..+|.|+.+
T Consensus        36 ~l~l~G~V~N~~dG~Vei~   54 (102)
T 1urr_A           36 RLGVRGWCMNTRDGTVKGQ   54 (102)
T ss_dssp             HHTCEEEEEECTTSCEEEE
T ss_pred             HCCCEEEEEECCCCCEEEE
T ss_conf             8699899999999989999


No 23 
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=35.40  E-value=7.7  Score=17.67  Aligned_cols=14  Identities=21%  Similarity=0.370  Sum_probs=9.4

Q ss_pred             EEEEEEEECCCCEE
Q ss_conf             79999998898769
Q gi|254780663|r  179 QIHGAWFDISSGKL  192 (207)
Q Consensus       179 ~I~G~~yDi~tG~v  192 (207)
                      +.|||.||++||+.
T Consensus        74 p~Hg~~F~l~tG~~   87 (113)
T 2jo6_A           74 PLKKQRFRLSDGLC   87 (113)
T ss_dssp             TTTTEEEETTTTEE
T ss_pred             CCCCCEEECCCCCC
T ss_conf             98987897898248


No 24 
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=35.01  E-value=20  Score=14.97  Aligned_cols=30  Identities=17%  Similarity=0.399  Sum_probs=20.8

Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECC-CHHHHH
Q ss_conf             578887767220576689998158-538988
Q gi|254780663|r   80 ATSAAIEFAVQGLNVEHIVVMGHG-RCGGIQ  109 (207)
Q Consensus        80 ~~~~sle~av~~l~v~~iiV~GHt-~CGav~  109 (207)
                      .....+.-.+..++.+.++++||| ++|.+.
T Consensus        75 ~~~~di~~~~~~l~~~~~~lvGhS~Gg~~~~  105 (277)
T 1brt_A           75 TFAADLNTVLETLDLQDAVLVGFSTGTGEVA  105 (277)
T ss_dssp             HHHHHHHHHHHHHTCCSEEEEEEGGGHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCCCCHH
T ss_conf             9999999999981999706999723312123


No 25 
>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A
Probab=32.93  E-value=12  Score=16.36  Aligned_cols=20  Identities=10%  Similarity=0.190  Sum_probs=10.5

Q ss_pred             HHHHHCCCCCEEEEEECCCC
Q ss_conf             99862389975999962678
Q gi|254780663|r   25 FQELANQQKPKIMIISCCDS   44 (207)
Q Consensus        25 ~~~l~~~q~P~~~vitC~Ds   44 (207)
                      ++.+.+..-|.+++|..+|-
T Consensus       127 ~~~~~~~~lp~i~~INK~Dr  146 (529)
T 2h5e_A          127 MEVTRLRDTPILTFMNKLDR  146 (529)
T ss_dssp             HHHHTTTTCCEEEEEECTTS
T ss_pred             HHHHHHCCCCEEEEEEEECC
T ss_conf             87777517870754443146


No 26 
>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A
Probab=32.70  E-value=14  Score=16.04  Aligned_cols=23  Identities=22%  Similarity=0.253  Sum_probs=11.6

Q ss_pred             CEEEEEEEECCCCEEEEEECCCC
Q ss_conf             67999999889876999846888
Q gi|254780663|r  178 LQIHGAWFDISSGKLWILDPTSN  200 (207)
Q Consensus       178 l~I~G~~yDi~tG~v~~l~~~~~  200 (207)
                      +.|.||+-+..+|.+..+..+.+
T Consensus        33 l~l~G~V~N~~dGv~~~~~~~~e   55 (91)
T 1gxu_A           33 LNLHGDVCNDGDGVEVRLREDPE   55 (91)
T ss_dssp             HTCCEEEEECSSSEEEEESSCCH
T ss_pred             CCCEEEEEECCCCEEEEEEECHH
T ss_conf             19889999999945999991999


No 27 
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida}
Probab=31.83  E-value=7.8  Score=17.65  Aligned_cols=17  Identities=24%  Similarity=0.288  Sum_probs=12.7

Q ss_pred             CEEEEEEEECCCCEEEE
Q ss_conf             67999999889876999
Q gi|254780663|r  178 LQIHGAWFDISSGKLWI  194 (207)
Q Consensus       178 l~I~G~~yDi~tG~v~~  194 (207)
                      -+.|||.||+.||++..
T Consensus        61 CP~Hg~~F~l~tG~~~~   77 (106)
T 3dqy_A           61 CTLHFGKFCVRTGKVKA   77 (106)
T ss_dssp             CTTTCCEEETTTCCEEE
T ss_pred             ECCCCCEEECCCCCCCC
T ss_conf             88889899999823966


No 28 
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxidoreductase; 1.60A {Burkholderia xenovorans LB400} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=31.40  E-value=8.9  Score=17.27  Aligned_cols=18  Identities=22%  Similarity=0.246  Sum_probs=13.7

Q ss_pred             CEEEEEEEECCCCEEEEE
Q ss_conf             679999998898769998
Q gi|254780663|r  178 LQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       178 l~I~G~~yDi~tG~v~~l  195 (207)
                      -+.|||.||++||++..-
T Consensus        66 Cp~H~~~f~l~tG~~~~~   83 (112)
T 1fqt_A           66 CSLHMGKFCVRTGKVKSP   83 (112)
T ss_dssp             CTTTCCEEETTTCCEEES
T ss_pred             ECCCCCEEECCCEEECCC
T ss_conf             088699998997008578


No 29 
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=31.32  E-value=12  Score=16.31  Aligned_cols=18  Identities=17%  Similarity=0.337  Sum_probs=11.1

Q ss_pred             CEEEEEEEECCCCEEEEE
Q ss_conf             679999998898769998
Q gi|254780663|r  178 LQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       178 l~I~G~~yDi~tG~v~~l  195 (207)
                      +.|.||+.+..+|.|+.+
T Consensus        30 l~l~G~V~N~~dG~Vei~   47 (92)
T 2gv1_A           30 LGLTGYAKNLDDGSVEVV   47 (92)
T ss_dssp             HTCCCEEEECSSSCEEEE
T ss_pred             CCCEEEEEECCCCCEEEE
T ss_conf             198899999999979999


No 30 
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=30.08  E-value=11  Score=16.61  Aligned_cols=14  Identities=21%  Similarity=-0.092  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             469999999999970
Q gi|254780663|r    3 SFPNTLLERHREFIQ   17 (207)
Q Consensus         3 ~~~~~Ll~~N~~f~~   17 (207)
                      ++.+.|+.| +.|.+
T Consensus       102 slirql~~G-~~~~~  115 (899)
T 3lvt_A          102 SNVRNMLIG-HLESQ  115 (899)
T ss_dssp             HHHHHHHHH-HHHHH
T ss_pred             HHHHHHHHH-HHHHH
T ss_conf             999999999-99999


No 31 
>3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3
Probab=30.03  E-value=7.3  Score=17.84  Aligned_cols=12  Identities=25%  Similarity=0.415  Sum_probs=5.4

Q ss_pred             EEEEEECCCCEE
Q ss_conf             999998898769
Q gi|254780663|r  181 HGAWFDISSGKL  192 (207)
Q Consensus       181 ~G~~yDi~tG~v  192 (207)
                      |||.||++||+.
T Consensus        74 Hg~~Fdl~tG~~   85 (119)
T 3c0d_A           74 YKQHFSLKSGQC   85 (119)
T ss_dssp             TCCEEETTTCBB
T ss_pred             CCCEEECCCCCC
T ss_conf             898999998479


No 32 
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=28.82  E-value=25  Score=14.31  Aligned_cols=79  Identities=14%  Similarity=0.125  Sum_probs=39.4

Q ss_pred             CCCEEEEE--ECCCCCCCHHHHHCC-CCC-CEEEE--ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf             99759999--626789988885178-866-24888--6242234577777530257888776722057668999815853
Q gi|254780663|r   32 QKPKIMII--SCCDSRVAPETIFNA-KPG-ELFVV--RNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRC  105 (207)
Q Consensus        32 q~P~~~vi--tC~DsRv~~~~i~~~-~~G-d~fv~--RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~C  105 (207)
                      ..|.++++  .+.+++.-...+-.. ..| .++..  |.-|.--.+... .........+.-.+..++.+.++++||+.-
T Consensus        20 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~-~~~~~~~~d~~~~l~~l~~~~~~lvg~s~g   98 (275)
T 1a88_A           20 DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTG-HDMDTYAADVAALTEALDLRGAVHIGHSTG   98 (275)
T ss_dssp             TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-CSHHHHHHHHHHHHHHHTCCSEEEEEETHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             9984999899988878999999999968998999827998667888888-899999999999987527876424553357


Q ss_pred             HHHHHH
Q ss_conf             898875
Q gi|254780663|r  106 GGIQAV  111 (207)
Q Consensus       106 Gav~aa  111 (207)
                      |++.+.
T Consensus        99 G~~~a~  104 (275)
T 1a88_A           99 GGEVAR  104 (275)
T ss_dssp             HHHHHH
T ss_pred             CCCHHH
T ss_conf             752305


No 33 
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=28.38  E-value=15  Score=15.71  Aligned_cols=67  Identities=18%  Similarity=0.238  Sum_probs=39.5

Q ss_pred             CCCEEEEEECCCCCCCHHH-----H---HCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             9975999962678998888-----5---1788662488862422345777775302578887767220576689998158
Q gi|254780663|r   32 QKPKIMIISCCDSRVAPET-----I---FNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHG  103 (207)
Q Consensus        32 q~P~~~vitC~DsRv~~~~-----i---~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt  103 (207)
                      +..+++|||.+|+|-..+-     +   +.. .| ..++.  ..+++     .........+.-++..-++..|+-.|=+
T Consensus         9 ~p~rvavitvsD~rg~~~D~nGp~L~~~l~~-~G-~~v~~--~~iv~-----Dd~~~~~~~l~~~~~~~~~dlIiTtGGt   79 (172)
T 1mkz_A            9 IPTRIAILTVSNRRGEEDDTSGHYLRDSAQE-AG-HHVVD--KAIVK-----ENRYAIRAQVSAWIASDDVQVVLITGGT   79 (172)
T ss_dssp             CCCEEEEEEECSSCCGGGCHHHHHHHHHHHH-TT-CEEEE--EEEEC-----SCHHHHHHHHHHHHHSSSCCEEEEESCC
T ss_pred             CCCEEEEEEEECCCCCCCCCHHHHHHHHHHH-CC-CEEEE--EEECC-----CCHHHHHHHHHHHHHCCCCCEEEECCCE
T ss_conf             6868999998489886766739999999998-59-95776--31058-----8579999999998762567615852531


Q ss_pred             CHHH
Q ss_conf             5389
Q gi|254780663|r  104 RCGG  107 (207)
Q Consensus       104 ~CGa  107 (207)
                      ++|.
T Consensus        80 g~g~   83 (172)
T 1mkz_A           80 GLTE   83 (172)
T ss_dssp             SSST
T ss_pred             ECCC
T ss_conf             3477


No 34 
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=28.29  E-value=8.1  Score=17.52  Aligned_cols=15  Identities=20%  Similarity=0.087  Sum_probs=10.7

Q ss_pred             CEEEEEEEECCCCEE
Q ss_conf             679999998898769
Q gi|254780663|r  178 LQIHGAWFDISSGKL  192 (207)
Q Consensus       178 l~I~G~~yDi~tG~v  192 (207)
                      -+.|||.||++||.+
T Consensus        63 Cp~H~~~f~l~tG~~   77 (111)
T 1vm9_A           63 CRAHLWTFNDGTGHG   77 (111)
T ss_dssp             CTTTCCEEETTTCBB
T ss_pred             ECCCCCEEECCCCCC
T ss_conf             489998999999459


No 35 
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=27.84  E-value=9.1  Score=17.19  Aligned_cols=18  Identities=28%  Similarity=0.501  Sum_probs=14.4

Q ss_pred             CEEEEEEEECCCCEEEEE
Q ss_conf             679999998898769998
Q gi|254780663|r  178 LQIHGAWFDISSGKLWIL  195 (207)
Q Consensus       178 l~I~G~~yDi~tG~v~~l  195 (207)
                      -+.|||.||++||++..-
T Consensus        63 Cp~Hg~~F~~~~G~~~~~   80 (103)
T 2qpz_A           63 CPLHQGRFDVCTGKALCA   80 (103)
T ss_dssp             CTTTTCEEETTTCCEEET
T ss_pred             ECCCCCEEECCCCCCCCC
T ss_conf             189898998998338358


No 36 
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=27.40  E-value=6.9  Score=17.97  Aligned_cols=15  Identities=40%  Similarity=0.676  Sum_probs=8.8

Q ss_pred             EEEEEEEECCCCEEE
Q ss_conf             799999988987699
Q gi|254780663|r  179 QIHGAWFDISSGKLW  193 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~  193 (207)
                      +.|||.||++||++.
T Consensus        65 p~Hg~~F~~~tG~~~   79 (108)
T 2i7f_A           65 PFHGGSFDIATGAAK   79 (108)
T ss_dssp             SSTTCEEETTTCCBC
T ss_pred             CCCCCEEECCCCCCC
T ss_conf             698839999997796


No 37 
>1f60_A Elongation factor EEF1A; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1g7c_A* 1ije_A* 1ijf_A* 2b7b_A* 2b7c_A
Probab=27.19  E-value=18  Score=15.23  Aligned_cols=58  Identities=9%  Similarity=0.040  Sum_probs=31.4

Q ss_pred             CCCCCCCHHHHHCCCCCCEEEEECCCCCCC-CCCCCCCCHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             267899888851788662488862422345-777775302578887767220576689998
Q gi|254780663|r   41 CCDSRVAPETIFNAKPGELFVVRNVANIVP-PYEPDGQHHATSAAIEFAVQGLNVEHIVVM  100 (207)
Q Consensus        41 C~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~-~~~~~~~~~~~~~sle~av~~l~v~~iiV~  100 (207)
                      |-......+++.|+..-|.-++=..++.=. +.... ....+-..+ +.+..||++.+||+
T Consensus        93 pGH~~f~~~~i~g~~~~d~ailvV~A~~G~~~~g~~-~~~qTkEHl-~l~~~Lgi~~iiV~  151 (458)
T 1f60_A           93 PGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGIS-KDGQTREHA-LLAFTLGVRQLIVA  151 (458)
T ss_dssp             CCCTTHHHHHHHSSSCCSEEEEEEECSHHHHHHHTC-TTSHHHHHH-HHHHHTTCCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHH-HHHHHHHHH-HHHHHCCCCEEEEE
T ss_conf             974878999987863146258998637672323100-557599999-99998599979999


No 38 
>2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3
Probab=26.33  E-value=9.5  Score=17.07  Aligned_cols=11  Identities=18%  Similarity=0.302  Sum_probs=4.5

Q ss_pred             EEEEEECCCCE
Q ss_conf             99999889876
Q gi|254780663|r  181 HGAWFDISSGK  191 (207)
Q Consensus       181 ~G~~yDi~tG~  191 (207)
                      |||.||++||+
T Consensus        73 Hg~~F~l~tG~   83 (130)
T 2jza_A           73 KKQHFRLYDGF   83 (130)
T ss_dssp             SCCEEETTTCC
T ss_pred             CCCEEECCCCC
T ss_conf             99788689977


No 39 
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=26.30  E-value=23  Score=14.57  Aligned_cols=16  Identities=13%  Similarity=0.144  Sum_probs=9.0

Q ss_pred             CCCCEEEEEECCCCCC
Q ss_conf             8997599996267899
Q gi|254780663|r   31 QQKPKIMIISCCDSRV   46 (207)
Q Consensus        31 ~q~P~~~vitC~DsRv   46 (207)
                      +.-|.++++|=.++.=
T Consensus        21 ~~~p~I~ivG~~nvGK   36 (195)
T 1svi_A           21 GGLPEIALAGRSNVGK   36 (195)
T ss_dssp             SCCCEEEEEEBTTSSH
T ss_pred             CCCCEEEEECCCCCCH
T ss_conf             8998999999999849


No 40 
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=26.20  E-value=11  Score=16.63  Aligned_cols=17  Identities=24%  Similarity=0.362  Sum_probs=12.1

Q ss_pred             CEEEEEEEECCCCEEEE
Q ss_conf             67999999889876999
Q gi|254780663|r  178 LQIHGAWFDISSGKLWI  194 (207)
Q Consensus       178 l~I~G~~yDi~tG~v~~  194 (207)
                      -+.|||.||++||++..
T Consensus        72 CP~H~~~Fdl~tG~~~~   88 (121)
T 3gce_A           72 CPLHVGRFDVRTGAPTA   88 (121)
T ss_dssp             CTTTCCEEETTTCCEEE
T ss_pred             ECCCCCEEECCCCCCCC
T ss_conf             68999899999967966


No 41 
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=25.12  E-value=12  Score=16.42  Aligned_cols=15  Identities=27%  Similarity=0.523  Sum_probs=9.4

Q ss_pred             EEEEEEEECCCCEEE
Q ss_conf             799999988987699
Q gi|254780663|r  179 QIHGAWFDISSGKLW  193 (207)
Q Consensus       179 ~I~G~~yDi~tG~v~  193 (207)
                      +.|||.||++||++.
T Consensus        66 p~H~~~f~l~tG~~~   80 (115)
T 2de6_D           66 PFHGGAFNVCTGMPA   80 (115)
T ss_dssp             TTTCCEEETTTCCEE
T ss_pred             CCCCCEEECCCCCCC
T ss_conf             798999999996697


No 42 
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=24.09  E-value=31  Score=13.76  Aligned_cols=35  Identities=23%  Similarity=0.399  Sum_probs=26.5

Q ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
Q ss_conf             02578887767220576689998158538988753
Q gi|254780663|r   78 HHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVL  112 (207)
Q Consensus        78 ~~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~  112 (207)
                      -.++..++.+.....+.+.|+|+|||-=|.+.+++
T Consensus       147 l~d~~~a~~~l~~~~~~~~I~v~GdSAGG~Lal~l  181 (326)
T 3d7r_A          147 FQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSF  181 (326)
T ss_dssp             HHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH
T ss_conf             99999999999834996344999718983477899


No 43 
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=24.02  E-value=31  Score=13.75  Aligned_cols=27  Identities=19%  Similarity=0.352  Sum_probs=20.9

Q ss_pred             EEEEEECCCCEEEEEECCCCEEEECCC
Q ss_conf             999998898769998468882583359
Q gi|254780663|r  181 HGAWFDISSGKLWILDPTSNEFTCDTR  207 (207)
Q Consensus       181 ~G~~yDi~tG~v~~l~~~~~~F~~~~~  207 (207)
                      |..-.-++.|.+.+|||..+.|+.++.
T Consensus       132 HaIa~~~~~~kvtfFDPN~GEF~~~s~  158 (188)
T 1ukf_A          132 HAIACSCEGSQFKLFDPNLGEFQSSRS  158 (188)
T ss_dssp             EEEEEEEETTEEEEEETTTEEEEEETT
T ss_pred             EEEEEEECCCCEEEECCCCCCEECCHH
T ss_conf             289998569937997899877435617


No 44 
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=23.95  E-value=31  Score=13.74  Aligned_cols=67  Identities=22%  Similarity=0.095  Sum_probs=39.2

Q ss_pred             CCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf             38997599996267899888851788662488862422345777775302578887767220576689998158538
Q gi|254780663|r   30 NQQKPKIMIISCCDSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCG  106 (207)
Q Consensus        30 ~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CG  106 (207)
                      .|=.|. +++|-+||=-++..-+-...| .-++|-..      +.+  ..+.--+|+|++...+.+.|+|+|=++=.
T Consensus        35 ~gi~Pd-~iiGDfDSi~~~~~~~~~~~~-~~i~~~p~------dkD--~TD~ekAl~~~~~~~~~~~I~i~Ga~GgR  101 (218)
T 3ihk_A           35 NQLPLD-LAIGDFDSVSAEEFKQIKAKA-KKLVMAPA------EKN--DTDTELALKTIFDCFGRVEIIVFGAFGGR  101 (218)
T ss_dssp             TTCCCS-EEEECCTTSCHHHHHHHHTTC-SSEEECCS------SCS--SCHHHHHHHHHHHHTSSCEEEEESCSSSC
T ss_pred             CCCCCC-EEECCCCCCCHHHHHHHHHCC-CEEEECCC------CCC--CCHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             699869-898868899857888886369-78999870------146--20589999999875699879999337897


No 45 
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=23.89  E-value=13  Score=16.09  Aligned_cols=15  Identities=20%  Similarity=0.009  Sum_probs=9.4

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             469999999999970
Q gi|254780663|r    3 SFPNTLLERHREFIQ   17 (207)
Q Consensus         3 ~~~~~Ll~~N~~f~~   17 (207)
                      ++.+.|+.|.+-+.+
T Consensus       177 slIrQl~~G~~~l~~  191 (1045)
T 3bvx_A          177 NVLLQLTEGQTWLKQ  191 (1045)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             999999999999998


No 46 
>1g7s_A Translation initiation factor IF2/EIF5B; translational GTPase; HET: GDP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: b.43.3.1 b.43.3.1 c.20.1.1 c.37.1.8 PDB: 1g7r_A* 1g7t_A*
Probab=22.75  E-value=19  Score=15.13  Aligned_cols=65  Identities=12%  Similarity=0.083  Sum_probs=31.6

Q ss_pred             CCCEEEEEECC-CCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             99759999626-78998888517886624888624223457777753025788877672205766899981585
Q gi|254780663|r   32 QKPKIMIISCC-DSRVAPETIFNAKPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGR  104 (207)
Q Consensus        32 q~P~~~vitC~-DsRv~~~~i~~~~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~  104 (207)
                      ..+.+.+|-|. ..--..+...++..-|+-++=..++-       +....+..++.+| ..++++.|+++---|
T Consensus        68 ~~~~i~~iDTPGH~~F~~~~~rg~~~~D~ailVV~A~~-------Gv~~QT~e~i~~a-~~~~vp~Iv~INKiD  133 (594)
T 1g7s_A           68 TLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINE-------GFKPQTQEALNIL-RMYRTPFVVAANKID  133 (594)
T ss_dssp             TCCEEEEECCCTTSCCTTSBCSSSBSCSEEEEEEETTT-------CCCHHHHHHHHHH-HHTTCCEEEEEECGG
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCC-------CCCHHHHHHHHHH-HHCCCCEEEEEECCC
T ss_conf             88439999898769999999999976889999998888-------9638999999999-984998799998965


No 47 
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=22.23  E-value=33  Score=13.53  Aligned_cols=34  Identities=21%  Similarity=0.187  Sum_probs=27.6

Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
Q ss_conf             2578887767220576689998158538988753
Q gi|254780663|r   79 HATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVL  112 (207)
Q Consensus        79 ~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~  112 (207)
                      .++.++++|......+..|.|+|||--|.+....
T Consensus       421 ~D~~~a~~~l~~~~~~~ri~i~G~S~GG~~a~~~  454 (582)
T 3o4h_A          421 EDVSAAARWARESGLASELYIMGYSYGGYMTLCA  454 (582)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
T ss_conf             6699999998862875267446655664343441


No 48 
>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} SCOP: d.108.1.7
Probab=21.34  E-value=35  Score=13.41  Aligned_cols=63  Identities=17%  Similarity=0.235  Sum_probs=37.2

Q ss_pred             CCCCCCCHHHH--HCC-CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             26789988885--178-86624888624223457777753025788877672205766899981585389
Q gi|254780663|r   41 CCDSRVAPETI--FNA-KPGELFVVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGG  107 (207)
Q Consensus        41 C~DsRv~~~~i--~~~-~~Gd~fv~RnaGn~v~~~~~~~~~~~~~~sle~av~~l~v~~iiV~GHt~CGa  107 (207)
                      +..+|+.+...  |.+ -.|...=+.-+-...+.    +.-.+.++-||||-..|++.+|+||=+-+..-
T Consensus        24 ~f~~~~t~~~~~~W~~vl~~~~Lyv~iP~~~l~~----GsKe~lvaLLE~Aee~L~c~~vvic~~k~r~d   89 (126)
T 1zo0_A           24 SIQCTLTEAKQVTWRAVWNGGGLYIELPAGPLPE----GSKDSFAALLEFAEEQLRADHVFICFPKNRED   89 (126)
T ss_dssp             EEEECCTTSCCEEEEEEEETTEEEEECSSCCCSS----CCSHHHHHHHHHHHHHHCCCCEEEEECCCSSC
T ss_pred             EEEEEECCCEEEEEEEEEECCEEEEECCCCCCCC----CCHHHHHHHHHHHHHCCCCCEEEEEEECCCHH
T ss_conf             9999825443899888986888999877753621----11889999999765503987899999588725


No 49 
>1gz0_A Hypothetical tRNA/RRNA methyltransferase YJFH; 2'O-methyltransferase, knot, montreal- kingston bacterial structural genomics initiative, BSGI; 2.5A {Escherichia coli} SCOP: c.116.1.1 d.79.3.3
Probab=20.79  E-value=36  Score=13.34  Aligned_cols=71  Identities=13%  Similarity=0.126  Sum_probs=44.1

Q ss_pred             CHHHHHHHHCCCCCEEEEEECCCCCCCH-----HHHHCCCCCCEEEE---ECCCCCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             9889998623899759999626789988-----88517886624888---624223457777753025788877672205
Q gi|254780663|r   21 DKKLFQELANQQKPKIMIISCCDSRVAP-----ETIFNAKPGELFVV---RNVANIVPPYEPDGQHHATSAAIEFAVQGL   92 (207)
Q Consensus        21 ~~~~~~~l~~~q~P~~~vitC~DsRv~~-----~~i~~~~~Gd~fv~---RnaGn~v~~~~~~~~~~~~~~sle~av~~l   92 (207)
                      ++..+.+++.+..|.-++.-|...+..+     +.+...++.-+.++   +++||              +|+|.=.+..+
T Consensus        64 ~~~~l~~~~~~~~~qgv~~~~~~~~~~~~~~~~~~~~~~~~~~~vvLd~i~dp~N--------------lGaiiRta~af  129 (253)
T 1gz0_A           64 NRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHN--------------LGACLRSADAA  129 (253)
T ss_dssp             CSHHHHHTTTSCCCTTEEEEECCCCCCCGGGHHHHHHTCSSCEEEEEESCCCHHH--------------HHHHHHHHHHH
T ss_pred             CHHHHHHHCCCCCCCCCHHEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCH--------------HHHHHHHHHHC
T ss_conf             9999977503433455100010112133566999984668986999955788507--------------99999999972


Q ss_pred             CCCEEEEEECCCH
Q ss_conf             7668999815853
Q gi|254780663|r   93 NVEHIVVMGHGRC  105 (207)
Q Consensus        93 ~v~~iiV~GHt~C  105 (207)
                      |++.|+++++...
T Consensus       130 G~~~vil~~~~~~  142 (253)
T 1gz0_A          130 GVHAVIVPKDRSA  142 (253)
T ss_dssp             TCSEEEEESSSSC
T ss_pred             CCCEEEECCCCCC
T ss_conf             9986830467667


No 50 
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=20.21  E-value=37  Score=13.26  Aligned_cols=35  Identities=14%  Similarity=0.169  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf             25788877672205766899981585389887530
Q gi|254780663|r   79 HATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLD  113 (207)
Q Consensus        79 ~~~~~sle~av~~l~v~~iiV~GHt~CGav~aa~~  113 (207)
                      ......|.--+..++.+.++++|||--|.+...+.
T Consensus       118 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a  152 (314)
T 3kxp_A          118 NDYADDIAGLIRTLARGHAILVGHSLGARNSVTAA  152 (314)
T ss_dssp             HHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH
T ss_conf             99999999999980999879999547865421233


No 51 
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=20.16  E-value=30  Score=13.81  Aligned_cols=11  Identities=27%  Similarity=0.561  Sum_probs=3.5

Q ss_pred             EEEEEECCCHH
Q ss_conf             89998158538
Q gi|254780663|r   96 HIVVMGHGRCG  106 (207)
Q Consensus        96 ~iiV~GHt~CG  106 (207)
                      +|++.|..+||
T Consensus        13 nI~i~G~pG~G   23 (180)
T 3iij_A           13 NILLTGTPGVG   23 (180)
T ss_dssp             CEEEECSTTSS
T ss_pred             CEEEECCCCCC
T ss_conf             57998999988


No 52 
>1r5b_A Eukaryotic peptide chain release factor GTP- binding subunit; translation termination, peptide release, GTPase; 2.35A {Schizosaccharomyces pombe} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1r5n_A* 1r5o_A* 3e20_A
Probab=20.10  E-value=33  Score=13.54  Aligned_cols=58  Identities=14%  Similarity=0.114  Sum_probs=25.7

Q ss_pred             CCCCHHHHHCCCCCCEEEEECCCCC---CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE-EECCCH
Q ss_conf             8998888517886624888624223---4577777530257888776722057668999-815853
Q gi|254780663|r   44 SRVAPETIFNAKPGELFVVRNVANI---VPPYEPDGQHHATSAAIEFAVQGLNVEHIVV-MGHGRC  105 (207)
Q Consensus        44 sRv~~~~i~~~~~Gd~fv~RnaGn~---v~~~~~~~~~~~~~~sle~av~~l~v~~iiV-~GHt~C  105 (207)
                      .+...++++|+...|.-++=..++.   ....+.    ........+....|+++.|+| +=--|+
T Consensus       132 ~~ylk~~i~G~~~~d~allVV~a~~G~~~~~~~~----~~~t~eh~~l~~~lgi~~iiV~vnK~D~  193 (467)
T 1r5b_A          132 KGYVTNMINGASQADIGVLVISARRGEFEAGFER----GGQTREHAVLARTQGINHLVVVINKMDE  193 (467)
T ss_dssp             ----------TTSCSEEEEEEECSTTHHHHTTST----TCCHHHHHHHHHHTTCSSEEEEEECTTS
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH----HHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             8999999987521475407998366864432123----3547999999997299759999941566


Done!