BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780663|ref|YP_003065076.1| carbonate dehydratase [Candidatus Liberibacter asiaticus str. psy62] (207 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780663|ref|YP_003065076.1| carbonate dehydratase [Candidatus Liberibacter asiaticus str. psy62] Length = 207 Score = 433 bits (1114), Expect = e-124, Method: Compositional matrix adjust. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MTSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELF 60 MTSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELF Sbjct: 1 MTSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELF 60 Query: 61 VVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTS 120 VVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTS Sbjct: 61 VVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTS 120 Query: 121 PGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQI 180 PGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQI Sbjct: 121 PGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQI 180 Query: 181 HGAWFDISSGKLWILDPTSNEFTCDTR 207 HGAWFDISSGKLWILDPTSNEFTCDTR Sbjct: 181 HGAWFDISSGKLWILDPTSNEFTCDTR 207 >gi|254780682|ref|YP_003065095.1| hypothetical protein CLIBASIA_02845 [Candidatus Liberibacter asiaticus str. psy62] Length = 199 Score = 27.7 bits (60), Expect = 0.16, Method: Compositional matrix adjust. Identities = 12/20 (60%), Positives = 13/20 (65%) Query: 179 QIHGAWFDISSGKLWILDPT 198 QIH A ISSG + IL PT Sbjct: 42 QIHKALMSISSGIILILSPT 61 >gi|254780623|ref|YP_003065036.1| 2-polyprenylphenol 6-hydroxylase [Candidatus Liberibacter asiaticus str. psy62] Length = 517 Score = 25.4 bits (54), Expect = 0.73, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 13/58 (22%) Query: 37 MIISCCDSRVAPETIFNAKPGELFVVRNVAN-------------IVPPYEPDGQHHAT 81 +I+S R+ P +F K LFV RN+ + P Y GQ AT Sbjct: 19 VIVSLPSDRLPPIIVFGKKIASLFVRRNIKKCQRSDRLARAMNRLGPSYVKMGQFLAT 76 >gi|254780606|ref|YP_003065019.1| cell division protein [Candidatus Liberibacter asiaticus str. psy62] Length = 744 Score = 24.3 bits (51), Expect = 1.6, Method: Compositional matrix adjust. Identities = 13/41 (31%), Positives = 20/41 (48%) Query: 135 IAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKE 175 I +I+ N +TILE+ I+ + N+ P V E E Sbjct: 285 ITHEILEKNAGSLETILEEFGIKGEIINVNPGPVVTLYEFE 325 >gi|254780743|ref|YP_003065156.1| putative uracil-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] Length = 261 Score = 23.9 bits (50), Expect = 1.9, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Query: 172 LEKEHMLQIHGAWFDISSGKLWILDPTSNEFTCDTR 207 L +E +L I A F SG W+ D +NE T +++ Sbjct: 7 LSQEQILTI--ALFYADSGVYWVFDEPNNEATYESQ 40 >gi|254780199|ref|YP_003064612.1| outer membrane lipoprotein [Candidatus Liberibacter asiaticus str. psy62] Length = 160 Score = 23.9 bits (50), Expect = 2.2, Method: Compositional matrix adjust. Identities = 9/26 (34%), Positives = 12/26 (46%) Query: 105 CGGIQAVLDSNNSSTSPGDFIGKWMD 130 C + V+DS+ P D G W D Sbjct: 24 CSALSVVVDSSELLPEPMDITGYWED 49 >gi|254780799|ref|YP_003065212.1| DNA translocase FtsK [Candidatus Liberibacter asiaticus str. psy62] Length = 806 Score = 23.9 bits (50), Expect = 2.3, Method: Compositional matrix adjust. Identities = 10/38 (26%), Positives = 19/38 (50%) Query: 138 KIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKE 175 K++ NN +++L I+ + N+R P + E E Sbjct: 330 KVMQNNACTLKSVLSDFGIQGEIVNVRPGPVITLYELE 367 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.320 0.135 0.410 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 132,321 Number of Sequences: 1233 Number of extensions: 5157 Number of successful extensions: 14 Number of sequences better than 100.0: 7 Number of HSP's better than 100.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 7 Number of HSP's gapped (non-prelim): 7 length of query: 207 length of database: 328,796 effective HSP length: 70 effective length of query: 137 effective length of database: 242,486 effective search space: 33220582 effective search space used: 33220582 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 36 (18.5 bits)