BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= gi|254780663|ref|YP_003065076.1| carbonate dehydratase
[Candidatus Liberibacter asiaticus str. psy62]
         (207 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>gi|254780663|ref|YP_003065076.1| carbonate dehydratase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 207

 Score =  433 bits (1114), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MTSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELF 60
           MTSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELF
Sbjct: 1   MTSFPNTLLERHREFIQDQYDKKLFQELANQQKPKIMIISCCDSRVAPETIFNAKPGELF 60

Query: 61  VVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTS 120
           VVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTS
Sbjct: 61  VVRNVANIVPPYEPDGQHHATSAAIEFAVQGLNVEHIVVMGHGRCGGIQAVLDSNNSSTS 120

Query: 121 PGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQI 180
           PGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQI
Sbjct: 121 PGDFIGKWMDIVRPIAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKEHMLQI 180

Query: 181 HGAWFDISSGKLWILDPTSNEFTCDTR 207
           HGAWFDISSGKLWILDPTSNEFTCDTR
Sbjct: 181 HGAWFDISSGKLWILDPTSNEFTCDTR 207


>gi|254780682|ref|YP_003065095.1| hypothetical protein CLIBASIA_02845 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 199

 Score = 27.7 bits (60), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 12/20 (60%), Positives = 13/20 (65%)

Query: 179 QIHGAWFDISSGKLWILDPT 198
           QIH A   ISSG + IL PT
Sbjct: 42  QIHKALMSISSGIILILSPT 61


>gi|254780623|ref|YP_003065036.1| 2-polyprenylphenol 6-hydroxylase [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 517

 Score = 25.4 bits (54), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 13/58 (22%)

Query: 37 MIISCCDSRVAPETIFNAKPGELFVVRNVAN-------------IVPPYEPDGQHHAT 81
          +I+S    R+ P  +F  K   LFV RN+               + P Y   GQ  AT
Sbjct: 19 VIVSLPSDRLPPIIVFGKKIASLFVRRNIKKCQRSDRLARAMNRLGPSYVKMGQFLAT 76


>gi|254780606|ref|YP_003065019.1| cell division protein [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 744

 Score = 24.3 bits (51), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 135 IAQKIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKE 175
           I  +I+  N    +TILE+  I+  + N+   P V   E E
Sbjct: 285 ITHEILEKNAGSLETILEEFGIKGEIINVNPGPVVTLYEFE 325


>gi|254780743|ref|YP_003065156.1| putative uracil-DNA glycosylase [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 261

 Score = 23.9 bits (50), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 172 LEKEHMLQIHGAWFDISSGKLWILDPTSNEFTCDTR 207
           L +E +L I  A F   SG  W+ D  +NE T +++
Sbjct: 7   LSQEQILTI--ALFYADSGVYWVFDEPNNEATYESQ 40


>gi|254780199|ref|YP_003064612.1| outer membrane lipoprotein [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 160

 Score = 23.9 bits (50), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 105 CGGIQAVLDSNNSSTSPGDFIGKWMD 130
           C  +  V+DS+     P D  G W D
Sbjct: 24  CSALSVVVDSSELLPEPMDITGYWED 49


>gi|254780799|ref|YP_003065212.1| DNA translocase FtsK [Candidatus Liberibacter asiaticus str. psy62]
          Length = 806

 Score = 23.9 bits (50), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 138 KIVANNPTEKQTILEQLSIRNSLKNIRNFPFVNKLEKE 175
           K++ NN    +++L    I+  + N+R  P +   E E
Sbjct: 330 KVMQNNACTLKSVLSDFGIQGEIVNVRPGPVITLYELE 367


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.320    0.135    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,321
Number of Sequences: 1233
Number of extensions: 5157
Number of successful extensions: 14
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 7
length of query: 207
length of database: 328,796
effective HSP length: 70
effective length of query: 137
effective length of database: 242,486
effective search space: 33220582
effective search space used: 33220582
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 36 (18.5 bits)