HHsearch alignment for GI: 254780664 and conserved domain: smart00851
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=99.44 E-value=2.7e-13 Score=117.24 Aligned_cols=89 Identities=44% Similarity=0.723 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCEEEHHHHCCCCHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCC
Q ss_conf 86999999998799999942768999988995179465348816519855323715553553308898999999977998
Q gi|254780664|r 28 GVVEFASRLLSRGIKIISTGGTCQLLEEEGIPVTSVFDITKFPEIMGGRVKTLHPKIYGGILSIRDNPAHMKFMQDHELE 107 (536)
Q Consensus 28 gl~~la~~L~~~g~~iisTgGTa~~l~~~gi~v~~Vs~~TgfpEil~GRVKTLHP~I~ggIL~~r~~~~~~~~l~~~~i~ 107 (536)
T Consensus 1 ~~~~~ak~l~~lGf~l~AT~GTa~~L~~~Gi~v-----------------~~l~~ki~~g~~-------~--i~~~i~~~ 54 (90)
T smart00851 1 GLVELAKRLAELGFELVATGGTAKFLREAGLPV-----------------KTLHPKVHGGIL-------A--ILDLIKNG 54 (90)
T ss_pred CHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCC-----------------EEEECCCCCCCC-------C--HHHHHCCC
T ss_conf 968999999988998998125899999759971-----------------043024435610-------4--89981978
Q ss_pred CEEEEEEECCCHHHHHCC-CCCHHHHHHCCCCCCHH
Q ss_conf 414999948888997317-65311232002334346
Q gi|254780664|r 108 SIDLVVVNLYPFEESFCR-EDDYYTMVENIDIGGPS 142 (536)
Q Consensus 108 ~IDlVvvNLYPF~~~v~~-~~~~~~~IEnIDIGGps 142 (536)
T Consensus 55 ~IdlVInt~~~~~~~~~~d~~~iRr~a~~~~Ip~~T 90 (90)
T smart00851 55 EIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGAT 90 (90)
T ss_pred CEEEEEEECCCCCCHHHHCCCCHHHHHHCCCCCCCC
T ss_conf 879999846876323653588899998808988709