HHsearch results for GI: 254780664 and protein with PDBid: 1wo8_A
>1wo8_A Methylglyoxal synthase; structural genomics, riken structural genomics/proteomics initiative, RSGI, lyase; 1.70A {Thermus thermophilus HB8} SCOP: c.24.1.2
Probab=98.06 E-value=1e-05 Score=60.48 Aligned_cols=117 Identities=21% Similarity=0.221 Sum_probs=80.4
Q ss_pred EE-EEEEE-EECCCCHHHHHHHHHHC--CCEEEEEHHHHHHHHHC-CCCEEEHHHHCCCCHHCCCCCCCCCCHHHHHHHH
Q ss_conf 36-98998-75456869999999987--99999942768999988-9951794653488165198553237155535533
Q gi|254780664|r 16 VK-TALIS-VHNKTGVVEFASRLLSR--GIKIISTGGTCQLLEEE-GIPVTSVFDITKFPEIMGGRVKTLHPKIYGGILS 90 (536)
Q Consensus 16 ik-rALiS-V~dKtgl~~la~~L~~~--g~~iisTgGTa~~l~~~-gi~v~~Vs~~TgfpEil~GRVKTLHP~I~ggIL~ 90 (536)
|| -|||. =+||..+++|++.+.+. ||+|++|+||+++|+++ |++|+.|.... | ||
T Consensus 1 ~k~ialiAhD~dK~~l~~~a~~~~~ll~gf~i~AT~GTa~~L~~~~gi~v~~v~k~~---~--------------gg--- 60 (126)
T 1wo8_A 1 MKALALIAHDAKKDEMVAFCLRHKDVLARYPLLATGTTGARIQEATGLAVERVLSGP---L--------------GG--- 60 (126)
T ss_dssp CCEEEEEECGGGHHHHHHHHHHTHHHHTTSCEEECHHHHHHHHHHHCCCCEECCCTT---T--------------TH---
T ss_pred CCEEEEEEHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCEEEEEEECC---C--------------CC---
T ss_conf 954899830067699999999999997497599603299999983496489997458---8--------------99---
Q ss_pred CCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHHHH
Q ss_conf 08898999999977998414999948888997317653112320023343469998740156313530899989889875
Q gi|254780664|r 91 IRDNPAHMKFMQDHELESIDLVVVNLYPFEESFCREDDYYTMVENIDIGGPSMIRAAAKNHDYVTILTNPQDYPLFLAEM 170 (536)
Q Consensus 91 ~r~~~~~~~~l~~~~i~~IDlVvvNLYPF~~~v~~~~~~~~~IEnIDIGGpsmiRAAAKN~~~V~Vi~dp~dY~~~~~el 170 (536)
..++.++-.. ..|||||.=-=|.. +.+. +--|-.|.|+|..+ +|.++|+++-=..+++.|
T Consensus 61 ----~p~i~d~I~~--g~I~lVIn~~~~~~-----~~~~-------~~D~~~IRR~a~~~--~IP~~T~~~~A~a~v~al 120 (126)
T 1wo8_A 61 ----DLQIGARVAE--GKVLAVVFLQDPLT-----AKPH-------EPDVQALMRVCNVH--GVPLATNLVAAEALIAWI 120 (126)
T ss_dssp ----HHHHHHHHHT--TCEEEEEEECCTTS-----CCTT-------HHHHHHHHHHHHHT--TCCEECSHHHHHHHHHHH
T ss_pred ----CCCHHHHHHC--CCCCEEEEECCCCC-----CCCC-------CHHHHHHHHHHHHC--CCCEEECHHHHHHHHHHH
T ss_conf ----9899999985--99778998069888-----8645-------00089999999973--998897899999999999
Q ss_pred HC
Q ss_conf 30
Q gi|254780664|r 171 DV 172 (536)
Q Consensus 171 ~~ 172 (536)
++
T Consensus 121 ~~ 122 (126)
T 1wo8_A 121 RK 122 (126)
T ss_dssp HH
T ss_pred HH
T ss_conf 82