HHsearch alignment for GI: 254780666 and conserved domain: COG0270
>COG0270 Dcm Site-specific DNA methylase [DNA replication, recombination, and repair].
Probab=92.19 E-value=0.078 Score=33.33 Aligned_cols=78 Identities=22% Similarity=0.302 Sum_probs=56.0
Q ss_pred CCEECCCCCCCCCEEEECCCCC-CHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC----CCCEEEECCCCC
Q ss_conf 3100355644700001025684-10001059679877654432048874177207744577434----476689616742
Q gi|254780666|r 243 LSVLDLCAAPGGKTAQLIVSGA-KVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCPKK----LFDAVLVDAPCS 317 (445)
Q Consensus 243 ~~VLD~CAAPGGKT~~l~~~~~-~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~~~----~fD~iLlDaPCS 317 (445)
T Consensus 4 ~~~idLFsG~GG~~lGf~~agf~~~~a~Eid~~a~~ty~~n~~~-----~~~~~~di~~~~~~~~~~~~~DvligGpPCQ 78 (328)
T COG0270 4 MKVIDLFAGIGGLSLGFEEAGFEIVFANEIDPPAVATYKANFPH-----GDIILGDIKELDGEALRKSDVDVLIGGPPCQ 78 (328)
T ss_pred CEEEEECCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCC-----CCCHHHHHHHHCHHHCCCCCCCEEEECCCCC
T ss_conf 54998658756588999864984899874698899999985888-----7420303766052223556763798589972
Q ss_pred CCCHHHCC
Q ss_conf 11001101
Q gi|254780666|r 318 STGTIRRH 325 (445)
Q Consensus 318 g~Gt~rr~ 325 (445)
T Consensus 79 ~FS~aG~r 86 (328)
T COG0270 79 DFSIAGKR 86 (328)
T ss_pred CHHHHCCC
T ss_conf 13340776