HHsearch alignment for GI: 254780666 and conserved domain: PRK00517
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed.
Probab=97.88 E-value=0.0001 Score=54.73 Aligned_cols=128 Identities=19% Similarity=0.218 Sum_probs=88.4
Q ss_pred CCCCCCCCCCC--CCCCCCEECCCCCCCCCEEEECCCCC-CHHHHHCCHHHHHHHHHHHHCCCCCCE-EEEECCCCCCCC
Q ss_conf 32123222356--32133100355644700001025684-100010596798776544320488741-772077445774
Q gi|254780666|r 228 ASASIPVQLFG--TLNNLSVLDLCAAPGGKTAQLIVSGA-KVTALDVSKRRLEKLRCNLDRLHLYAE-DIIEMDAFDYCP 303 (445)
Q Consensus 228 ~aSql~~~~l~--~~~g~~VLD~CAAPGGKT~~l~~~~~-~i~A~D~~~~Rl~~l~~~~~R~g~~~~-~~~~~D~~~~~~ 303 (445)
T Consensus 147 ~TT~lcl~~l~~~~~~~~~vLDvG~GSGILaIaA~klGa~~v~a~DiD~~Av~~a~eN~~lN~v~~~~~~~~~~~~--~~ 224 (298)
T PRK00517 147 PTTRLCLEWLEKLVLPGKTVLDVGCGSGILAIAAAKLGAKPVLAIDIDPQAVEAARENAELNGVDDRLELYLPEDQ--PL 224 (298)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCC--CC
T ss_conf 4799999999843546886887157706999999974998499998989999999999998699842689616643--44
Q ss_pred CCCCCEEEECCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHHHHHHH
Q ss_conf 34476689616742110011011033328866778899999999999998608982899977478834399989999996
Q gi|254780666|r 304 KKLFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLRS 383 (445)
Q Consensus 304 ~~~fD~iLlDaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~~fL~~ 383 (445)
T Consensus 225 ~~~~DlvvAN-------------------------Ila~vl~~l~~~~~~~l~~~G~lilS--GIl~~~~~~v~~~~-~~ 276 (298)
T PRK00517 225 EGKADVIVAN-------------------------ILANPLIELAPDLAALVKPGGRLILS--GILAEQADEVLEAY-ED 276 (298)
T ss_pred CCCCCEEEEE-------------------------CCHHHHHHHHHHHHHHHCCCCEEEEE--CCCHHHHHHHHHHH-HH
T ss_conf 6764689973-------------------------15899999999999973899799992--78488999999999-98
Q ss_pred CC
Q ss_conf 88
Q gi|254780666|r 384 SP 385 (445)
Q Consensus 384 ~~ 385 (445)
T Consensus 277 ~g 278 (298)
T PRK00517 277 AG 278 (298)
T ss_pred CC
T ss_conf 79