HHsearch alignment for GI: 254780666 and conserved domain: PRK04338

>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional.
Probab=97.74  E-value=3.6e-05  Score=58.08  Aligned_cols=106  Identities=24%  Similarity=0.258  Sum_probs=75.7

Q ss_pred             CCCCCCCEECCCCCCCCCEEEEC-CC-CCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC--CCCCCEEEEC
Q ss_conf             63213310035564470000102-56-84100010596798776544320488741772077445774--3447668961
Q gi|254780666|r  238 GTLNNLSVLDLCAAPGGKTAQLI-VS-GAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCP--KKLFDAVLVD  313 (445)
Q Consensus       238 ~~~~g~~VLD~CAAPGGKT~~l~-~~-~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~--~~~fD~iLlD  313 (445)
T Consensus        48 ~~~~~~~ilDalsasGiR~iRy~~E~~~~~v~~NDi~~~a~~~i~~N~~~N~~~~~~v~~~dAn~lm~~~~~~fD~IDlD  127 (376)
T PRK04338         48 GPKRRKSVLDALSASGIRGIRYALETGVEKVILNDINPDAVELIKKNLELNGLENAEVFNEDANVLLHENERKFDVVDID  127 (376)
T ss_pred             HCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEC
T ss_conf             42069768740676549999998727998799956999999999999998299826981324899998378758778678


Q ss_pred             CCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH
Q ss_conf             674211001101103332886677889999999999999860898289997747883
Q gi|254780666|r  314 APCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDK  370 (445)
Q Consensus       314 aPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~  370 (445)
T Consensus       128 PfGSp~--------------------------pflDsAi~~v~~~G-lL~vTaTD~a  157 (376)
T PRK04338        128 PFGSPA--------------------------PFLDSAIRALRRGG-LLCVTATDTA  157 (376)
T ss_pred             CCCCCC--------------------------HHHHHHHHHHHCCC-EEEEEECCCC
T ss_conf             999920--------------------------87999999840398-8999946861