HHsearch alignment for GI: 254780666 and conserved domain: pfam01189
>pfam01189 Nol1_Nop2_Fmu NOL1/NOP2/sun family.
Probab=100.00 E-value=0 Score=520.81 Aligned_cols=261 Identities=35% Similarity=0.514 Sum_probs=228.5
Q ss_pred HHHHHCCCCCEEEEE---CCCHHHHHHHHHHHHCC-------CCCCEECCCCCCHHHCHHHHHCCCEECCCCCCCCCCCC
Q ss_conf 999614698366761---59989999864321023-------56611104567855585011001013463212322235
Q gi|254780666|r 168 ISDACISPLYIDLTV---KFDIETWAHKLNAVMLP-------TGGIRLKELPESIVSLPGFAEGVWWVQDASASIPVQLF 237 (445)
Q Consensus 168 l~~~~~~p~~l~i~~---k~~~~~~~~~L~~~~~~-------~~~~~~~~~~~~i~~~~~f~eG~~~VQD~aSql~~~~l 237 (445)
T Consensus 1 il~a~n~~~p~~lRvN~lk~~~e~~~~~L~~~gi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~G~~~vQD~aS~l~~~~L 80 (277)
T pfam01189 1 ILEANNCSPPGTLRKNVLKTKRWSLLQALELAGVQLEPLGRYPHALPVGDLPYSIGSLPPFENGAVTVQDASSQLDAIAL 80 (277)
T ss_pred CHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCCHHHHCCEEEEECHHHHHHHHHH
T ss_conf 94440999985999768769999999999877995898889987179726887812192655917999880677899971
Q ss_pred CCCCCCCEECCCCCCCCCEEEE---CCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC---CCCCCEEE
Q ss_conf 6321331003556447000010---25684100010596798776544320488741772077445774---34476689
Q gi|254780666|r 238 GTLNNLSVLDLCAAPGGKTAQL---IVSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCP---KKLFDAVL 311 (445)
Q Consensus 238 ~~~~g~~VLD~CAAPGGKT~~l---~~~~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~---~~~fD~iL 311 (445)
T Consensus 81 ~p~~g~~VLD~CAaPGgKt~~la~l~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~~~~~~~d~~~~~~~~~~~~fD~vL 160 (277)
T pfam01189 81 NPQEDEFILDMCAAPGGKTTHIAELMKNEGTVVAVDRNKQRLKRVYANIQRLGVFNIIVQEGDARQIDQKLLGGEFDRIL 160 (277)
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEE
T ss_conf 88999989883678881699999875898779983797899999999999759974799966444557434666665799
Q ss_pred ECCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCHHHHHHHHHHCCCCEEEC
Q ss_conf 61674211001101103332886677889999999999999860898289997747883439998999999688741781
Q gi|254780666|r 312 VDAPCSSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLRSSPIPVELV 391 (445)
Q Consensus 312 lDaPCSg~Gt~rr~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eEne~vV~~fL~~~~~~~~~~ 391 (445)
T Consensus 161 vDaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eENe~vV~~fL~~~~-~~~~~ 239 (277)
T pfam01189 161 LDAPCSGTGVIRRDPDIKWLRREADIAQLAELQKELLKAAWDLVKPGGVLVYSTCSVLPEENEAVIKYFLQKRP-DVELV 239 (277)
T ss_pred ECCCCCCCCEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCC-CCEEE
T ss_conf 72898898634558531211999999999999999999999971769989999499998998999999998699-98990
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 376323355664345586880898876323557778886314667654
Q gi|254780666|r 392 PLNSAYWKSIDMAMALSPEGWIRITPDMLEKIDGVSSGMDGFFAVALR 439 (445)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~g~~r~~P~~~~~~~~~~~g~DGFF~A~l~ 439 (445)
T Consensus 240 ~~~~~~~~~~--~~~~~~~~~~r~~P~--------~~~~dGFF~A~Lr 277 (277)
T pfam01189 240 PTGLSEGKIA--LAKRIVKGGLQSLPH--------ELNRDGFFFAKLR 277 (277)
T ss_pred CCCCCCCCCC--CCCCCCCCEEEECCC--------CCCCCCEEEEEEC
T ss_conf 4666545433--345577990798989--------9997727999859