HHsearch alignment for GI: 254780666 and conserved domain: pfam08241

Probab=97.80  E-value=2.7e-05  Score=59.07  Aligned_cols=92  Identities=29%  Similarity=0.323  Sum_probs=69.9

Q ss_pred             ECCCCCCCCCEEEECCC-CCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCCCCEEEECCCCCCCCHHH
Q ss_conf             03556447000010256-84100010596798776544320488741772077445774-34476689616742110011
Q gi|254780666|r  246 LDLCAAPGGKTAQLIVS-GAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAFDYCP-KKLFDAVLVDAPCSSTGTIR  323 (445)
Q Consensus       246 LD~CAAPGGKT~~l~~~-~~~i~A~D~~~~Rl~~l~~~~~R~g~~~~~~~~~D~~~~~~-~~~fD~iLlDaPCSg~Gt~r  323 (445)
T Consensus         1 LDiGcG~G~~~~~l~~~~~~~v~giD~s~~~i~~a~~~~~~~---~~~~~~~d~~~~~~~~~~fD~I~~------~~~l~   71 (95)
T pfam08241         1 LDVGCGTGLLTEALARLPGAQVTGVDLSPEMLALARKRAQED---GLTFVVGDAEDLPFPDESFDVVVS------SLVLH   71 (95)
T ss_pred             CCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCC---CCEEEEECCCCCCCCCCCCCEEEE------CCCHH
T ss_conf             964624999999998457999999949789987766310266---947998033246755456859998------33066


Q ss_pred             CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             011033328866778899999999999998608982899
Q gi|254780666|r  324 RHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVV  362 (445)
Q Consensus       324 r~Pd~~w~~~~~~l~~l~~~Q~~iL~~a~~~lk~gG~lv  362 (445)
T Consensus        72 ~~~---------~-------~~~~l~~~~r~LkpgG~l~   94 (95)
T pfam08241        72 HLP---------D-------PERALREIARVLKPGGKLV   94 (95)
T ss_pred             HCC---------C-------HHHHHHHHHHHCCCCEEEE
T ss_conf             468---------9-------9999999998778694997