RPSBLAST alignment for GI: 254780666 and conserved domain: COG0144

>gnl|CDD|30493 COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. Length = 355
 Score =  254 bits (650), Expect = 3e-68
 Identities = 128/364 (35%), Positives = 183/364 (50%), Gaps = 32/364 (8%)

Query: 98  VADYAVVDLAVEQAKRDKENRHFAKLVNSILRRVSREKIELLQRIAGISI---IPEWFKE 154
           V  +A VD  VE AK        AK VN++LRR+ R +  LL+ I   +     PEW  E
Sbjct: 1   VPPHAAVDETVEAAKERLGKDRAAKFVNAVLRRLERSEEALLEEILRPAFRYSHPEWLVE 60

Query: 155 RLENFYGKERVLAISDACISPLYIDL---TVKFDIETWAHKLNAV-------MLPTGGIR 204
           +L +  G++   AI+ A + P    L   T+K D+E     L           +    +R
Sbjct: 61  KLPDALGEDEAEAIAAALLRPPPRSLRVNTLKADVEELLEALEEAGVLDEKPWVLDEVLR 120

Query: 205 LKELPESIVSLPGFAEGVWWVQDASASIPVQLFGTLNNLSVLDLCAAPGGKTAQLI---- 260
           ++     I  LP FAEG+ +VQD ++ +P  +        VLDLCAAPGGKT  L     
Sbjct: 121 IEA-SGPIGRLPEFAEGLIYVQDEASQLPALVLDPKPGERVLDLCAAPGGKTTHLAELME 179

Query: 261 VSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAF----DYCPKKLFDAVLVDAPC 316
             GA V A+DVS +RL++LR NL RL +    ++  DA          + FD +L+DAPC
Sbjct: 180 NEGAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPGGEKFDRILLDAPC 239

Query: 317 SSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEV 376
           S TG IRR PDV W R  +DI + A  Q+++L   +  +KPGG++V+S CSL  +++EEV
Sbjct: 240 SGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYSTCSLTPEENEEV 299

Query: 377 VQKVLRSSPIPVELVPLNSAYWKSIDMAMALSPEGWIRITPDMLEKIDGVSSGMDGFFAV 436
           V++ L   P   EL P+    W  +   +        R+ P           G DGFF  
Sbjct: 300 VERFLERHPD-FELEPVRLP-WGPLFEGLGSELGKTRRLYPH--------VHGTDGFFIA 349

Query: 437 ALRR 440
            LR+
Sbjct: 350 KLRK 353