RPSBLAST alignment for GI: 254780666 and conserved domain: COG0144
>gnl|CDD|30493 COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. Length = 355
Score = 254 bits (650), Expect = 3e-68
Identities = 128/364 (35%), Positives = 183/364 (50%), Gaps = 32/364 (8%)
Query: 98 VADYAVVDLAVEQAKRDKENRHFAKLVNSILRRVSREKIELLQRIAGISI---IPEWFKE 154
V +A VD VE AK AK VN++LRR+ R + LL+ I + PEW E
Sbjct: 1 VPPHAAVDETVEAAKERLGKDRAAKFVNAVLRRLERSEEALLEEILRPAFRYSHPEWLVE 60
Query: 155 RLENFYGKERVLAISDACISPLYIDL---TVKFDIETWAHKLNAV-------MLPTGGIR 204
+L + G++ AI+ A + P L T+K D+E L + +R
Sbjct: 61 KLPDALGEDEAEAIAAALLRPPPRSLRVNTLKADVEELLEALEEAGVLDEKPWVLDEVLR 120
Query: 205 LKELPESIVSLPGFAEGVWWVQDASASIPVQLFGTLNNLSVLDLCAAPGGKTAQLI---- 260
++ I LP FAEG+ +VQD ++ +P + VLDLCAAPGGKT L
Sbjct: 121 IEA-SGPIGRLPEFAEGLIYVQDEASQLPALVLDPKPGERVLDLCAAPGGKTTHLAELME 179
Query: 261 VSGAKVTALDVSKRRLEKLRCNLDRLHLYAEDIIEMDAF----DYCPKKLFDAVLVDAPC 316
GA V A+DVS +RL++LR NL RL + ++ DA + FD +L+DAPC
Sbjct: 180 NEGAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPGGEKFDRILLDAPC 239
Query: 317 SSTGTIRRHPDVLWTRDTDDIVKSACFQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEV 376
S TG IRR PDV W R +DI + A Q+++L + +KPGG++V+S CSL +++EEV
Sbjct: 240 SGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYSTCSLTPEENEEV 299
Query: 377 VQKVLRSSPIPVELVPLNSAYWKSIDMAMALSPEGWIRITPDMLEKIDGVSSGMDGFFAV 436
V++ L P EL P+ W + + R+ P G DGFF
Sbjct: 300 VERFLERHPD-FELEPVRLP-WGPLFEGLGSELGKTRRLYPH--------VHGTDGFFIA 349
Query: 437 ALRR 440
LR+
Sbjct: 350 KLRK 353