HHsearch alignment for GI: 254780669 and conserved domain: COG2089
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane].
Probab=99.26 E-value=1.4e-08 Score=77.26 Aligned_cols=237 Identities=15% Similarity=0.212 Sum_probs=168.6
Q ss_pred CCEEECCCCCEEEEE--CCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCC-------------
Q ss_conf 727976997069995--48634999999999999999655339-97066015576886663222456-------------
Q gi|254780669|r 35 NQVTFSNEQRFVLIA--GPCQIESHDHAFMIAEKLYAICQSLN-IGLVYKSSFDKANRSSLAGKRGV------------- 98 (301)
Q Consensus 35 ~~i~ig~~~~l~iIA--GPCsiES~e~~~~~A~~lk~~~~~~~-~~~ifK~sfdKanRtS~~sfrG~------------- 98 (301)
T Consensus 5 g~r~i~~~~~~~iIAEig~NHnG~le~A~~lIdaAk~aGADavKfQt~~~-----~d~~t~~~~~~~~~i~~~~~~~sly 79 (347)
T COG2089 5 GNRTIGKDKKPFIIAEIGANHNGDLERAKELIDAAKEAGADAVKFQTFYT-----PDIMTLESKNVPFKIKTLWDKVSLY 79 (347)
T ss_pred CCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 76433589995799641455657589999999999973866555320356-----3100403357765555565666399
Q ss_pred --------CCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCC
Q ss_conf --------712488899988665287688522889999876502-15788225762899999998505977998367778
Q gi|254780669|r 99 --------GLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFL 169 (301)
Q Consensus 99 --------Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~ 169 (301)
T Consensus 80 el~e~~~~p~e~~~~Lke~a-~~~Gi~~~SSPfd~~svd~l~~~~~~ayKIaS~E~~~~plik~iA~~~kPiIlSTGm-a 157 (347)
T COG2089 80 ELYEEAETPLEWHAQLKEYA-RKRGIIFFSSPFDLTAVDLLESLNPPAYKIASGEINDLPLIKYIAKKGKPIILSTGM-A 157 (347)
T ss_pred HHHHHHCCCHHHHHHHHHHH-HHCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCC-C
T ss_conf 99998449999999999999-872938981678878899998569983773474335758999999639977997466-4
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 9999999999997258780899514654440100000001068885-187168711777421223453212638899999
Q gi|254780669|r 170 SPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPL 248 (301)
Q Consensus 170 s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~l 248 (301)
T Consensus 158 ~~~ei~~av~~~r~~g~~~i~LLhC~s~YPap~ed~nL~~i~~l~~~Fn~~vGl-SDHT~-----------g--~~---a 220 (347)
T COG2089 158 TIEEIEEAVAILRENGNPDIALLHCTSAYPAPFEDVNLKAIPKLAEAFNAIVGL-SDHTL-----------G--IL---A 220 (347)
T ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC-CCCCC-----------C--HH---H
T ss_conf 077799999999966998769998357899977773488799999996876156-66765-----------3--16---7
Q ss_pred HHHHHHHCCCEEEEEECCCHHHCC--CCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999997189889998369833479--7820186889999999999999998
Q gi|254780669|r 249 AKAAVAIGIAGIFLETHQDPDNAP--SDGPNMINIKDLPKLLSQLLAIDKI 297 (301)
Q Consensus 249 a~aa~a~G~dGlfiE~Hp~P~~Al--sD~~q~l~l~~l~~ll~~l~~i~~~ 297 (301)
T Consensus 221 ~l~AvALGA~--viEKHFtldk~~~GpD~afSldP~efk~mv~~ir~~~~a 269 (347)
T COG2089 221 PLAAVALGAS--VIEKHFTLDKSREGPDHAFSLDPDEFKEMVDAIRQVEKA 269 (347)
T ss_pred HHHHHHHCCC--CEEEEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHH
T ss_conf 8999872100--100003214777899711113889999999999999998