HHsearch alignment for GI: 254780669 and conserved domain: COG2877
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=744.98 Aligned_cols=272 Identities=57% Similarity=0.979 Sum_probs=266.9
Q ss_pred CEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 70683578772797699706999548634999999999999999655339970660155768866632224567124888
Q gi|254780669|r 26 AAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGRE 105 (301)
Q Consensus 26 ~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~ 105 (301)
T Consensus 3 ~~vk~----g~i~~~n~~~f~LiaGpcviEs~d~a~~~a~~l~~~t~~lgi~~vfKsSfDKANRsSi~s~RGpGLeeglk 78 (279)
T COG2877 3 KVVKV----GDIVIGNDLPFVLIAGPCVIESRDLALEIAEHLKELTEKLGIPYVFKSSFDKANRSSIHSYRGPGLEEGLK 78 (279)
T ss_pred CEEEE----CCEEECCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 36886----87774288853797144200107889999999999986039856986243423333211246877888999
Q ss_pred HHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99988665287688522889999876502157882257628999999985059779983677789999999999997258
Q gi|254780669|r 106 IFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHG 185 (301)
Q Consensus 106 il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~G 185 (301)
T Consensus 79 i~~~vK~efgv~ilTDVHe~~q~~~vA~VvDilQiPAFL~RQTDLlvA~AkTg~~vNvKKgQFLaPwdMkniv~K~~~~g 158 (279)
T COG2877 79 ILQEVKEEFGVPILTDVHEPSQAQPVAEVVDVLQIPAFLCRQTDLLVAAAKTGAVVNVKKGQFLAPWDMKNIVEKFLETG 158 (279)
T ss_pred HHHHHHHHCCCCEEECCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf 99999987199634135886653147755002213088763079999999758847612655158667555999998538
Q ss_pred CCCEEEEECCCCCCCHHHCCCCCCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 78089951465444010000000106888518716871177742122345321263889999999999718988999836
Q gi|254780669|r 186 AKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETH 265 (301)
Q Consensus 186 n~~i~lcERG~~fgy~~lvvD~~~i~~lk~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~H 265 (301)
T Consensus 159 n~~v~lcERG~sFGYnnLV~DMrsl~iM~~~~~PViFDaTHSvQ~pg~~g~~SGG~refv~~LaRAa~AvGvaGlF~EtH 238 (279)
T COG2877 159 NNKVILCERGASFGYNNLVVDMRSLPIMKEFGAPVIFDATHSVQQPGGQGGSSGGRREFVPTLARAAVAVGVAGLFIETH 238 (279)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC
T ss_conf 98679972667567540477766039998709986982423112788888888875211588899998743114787406
Q ss_pred CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 983347978201868899999999999999988519
Q gi|254780669|r 266 QDPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIKPL 301 (301)
Q Consensus 266 p~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~vk~l 301 (301)
T Consensus 239 pdP~~A~sDgp~mlpL~~le~ll~~l~~~d~l~k~~ 274 (279)
T COG2877 239 PDPDNAKSDGPNMLPLDKLEALLEQLKAIDDLVKSF 274 (279)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 983337788866567889999999999999998504