HHsearch alignment for GI: 254780669 and conserved domain: PRK00694
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated.
Probab=91.64 E-value=1.3 Score=24.96 Aligned_cols=117 Identities=15% Similarity=0.247 Sum_probs=74.0
Q ss_pred ECCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHH--HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 317706835787727976997069995486349999--999999999996553399706601557688666322245671
Q gi|254780669|r 23 HTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHD--HAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGL 100 (301)
Q Consensus 23 ~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e--~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gl 100 (301)
T Consensus 13 r~Tr~V~v----G~v~iGg~~Pi~vQ-SMt~t~T~D~~atv~Qi~~l~~aGceiV-------------Rvtvp-----~- 68 (606)
T PRK00694 13 RKTHSVRI----GNLFVGSEHSIKIQ-SMTTTATTDVDGTVRQICALQEHGCDIV-------------RVTVQ-----G- 68 (606)
T ss_pred CCCEEEEE----CCCCCCCCCCEEEE-ECCCCCCCCHHHHHHHHHHHHHCCCCEE-------------EECCC-----C-
T ss_conf 57636898----59665799967556-4689986368999999999998599989-------------98779-----9-
Q ss_pred HHHHHHHHHHHHH-----HCCEEEEECCCHHHHH-HHHHHCCEEEECHHHCCC--------------------------H
Q ss_conf 2488899988665-----2876885228899998-765021578822576289--------------------------9
Q gi|254780669|r 101 KKGREIFRDLKKK-----YGFPILTDVHTEQQCE-AIADSVDILQIPALLCRQ--------------------------T 148 (301)
Q Consensus 101 e~gL~il~e~k~~-----~glpv~TeV~~~~~~e-~~~~~vDilQIgA~~~rq--------------------------t 148 (301)
T Consensus 69 ~~~A~al~~I~~~l~~~~~~iPlvADIHF~~~~a~~a~~~~~kiRINPGN~~~~~~~f~~~~~~deey~~~~~~~~e~~~ 148 (606)
T PRK00694 69 IKEAQACEHIKERLIQQGISIPLVADIHFFPQAAMHVADFVDKVRINPGNYVDKRNMFTGKIYTDEQYAHSLLRLEEKFS 148 (606)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99998699999998636999998866688889999999752838888997666644444333317777777776888999
Q ss_pred HHHHHHHHCCCEEEE
Q ss_conf 999998505977998
Q gi|254780669|r 149 DLLTAAAQTGRVINV 163 (301)
Q Consensus 149 dLl~a~a~t~kpV~i 163 (301)
T Consensus 149 ~~v~~~k~~~~~iRI 163 (606)
T PRK00694 149 PLVEKCKRLGKAMRI 163 (606)
T ss_pred HHHHHHHHCCCCEEE
T ss_conf 999999984998787