HHsearch alignment for GI: 254780669 and conserved domain: PRK08318
>PRK08318 dihydropyrimidine dehydrogenase; Validated.
Probab=93.97 E-value=0.61 Score=27.07 Aligned_cols=147 Identities=15% Similarity=0.172 Sum_probs=87.0
Q ss_pred CEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC-CCCCCCCC------------CCCC-----
Q ss_conf 27976997069995486349999999999999996553399706601557-68866632------------2245-----
Q gi|254780669|r 36 QVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFD-KANRSSLA------------GKRG----- 97 (301)
Q Consensus 36 ~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfd-KanRtS~~------------sfrG----- 97 (301)
T Consensus 10 Gl~lk--NP~~lASgp~t-~~~~~i~~~~~----aG~---GaVV~KTl~~~~~~~~~pr~~~~~~~~~~~~G~~N~elis 79 (413)
T PRK08318 10 GIKSP--NPFWLASAPPT-NKYYNVARAFE----AGW---GGVVWKTLGPFIVNVSSPRFDALVKEDRRFIGFNNIELIT 79 (413)
T ss_pred CEECC--CCCEECCCCCC-CCHHHHHHHHH----CCC---EEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 99818--97678986788-99999999987----695---3999050787677889998257357762423623742134
Q ss_pred -CCCHHHHHHHHHHHHHH-CCEEEEECCC---HHH-H---HHHHHH-CCEEEE-------------CHHHCCCHHHHHHH
Q ss_conf -67124888999886652-8768852288---999-9---876502-157882-------------25762899999998
Q gi|254780669|r 98 -VGLKKGREIFRDLKKKY-GFPILTDVHT---EQQ-C---EAIADS-VDILQI-------------PALLCRQTDLLTAA 154 (301)
Q Consensus 98 -~Gle~gL~il~e~k~~~-glpv~TeV~~---~~~-~---e~~~~~-vDilQI-------------gA~~~rqtdLl~a~ 154 (301)
T Consensus 80 d~~le~~L~~i~~~k~~~P~~~vIaSI~g~~~~e~w~~la~~~e~~GaDalELNiSCPn~~~~~~~G~~~gq~pe~v~~i 159 (413)
T PRK08318 80 DRPLEVNLREIRRVKRDYPDRALIASIMVECNEEEWKEIAPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPELVEMV 159 (413)
T ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCCHHHHHHH
T ss_conf 45899999999998860789708999945878899999999866518877999555677666665551105799999999
Q ss_pred HH-----CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 50-----59779983677789999999999997258780899514
Q gi|254780669|r 155 AQ-----TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCER 194 (301)
Q Consensus 155 a~-----t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcER 194 (301)
T Consensus 160 ~~~Vk~~~~iPV~vKLsPnvt--di~~iA~aa~~aGADgv~liNT 202 (413)
T PRK08318 160 TRWVKRGSRLPVIAKLTPNIT--DIREPARAAKRGGADAVSLINT 202 (413)
T ss_pred HHHHHHHCCCCEEEEECCCCC--CHHHHHHHHHHCCCCEEEEEEC
T ss_conf 999885068856998289975--2899999999769988999814