HHsearch alignment for GI: 254780669 and conserved domain: pfam00793
>pfam00793 DAHP_synth_1 DAHP synthetase I family. Members of this family catalyse the first step in aromatic amino acid biosynthesis from chorismate. E-coli has three related synthetases, which are inhibited by different aromatic amino acids. This family also includes KDSA which has very similar catalytic activity but is involved in the first step of liposaccharide biosynthesis.
Probab=100.00 E-value=0 Score=556.22 Aligned_cols=247 Identities=34% Similarity=0.549 Sum_probs=235.9
Q ss_pred CCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 77279769970699954863499999999999999965533997066015576886663222456712488899988665
Q gi|254780669|r 34 KNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIFRDLKKK 113 (301)
Q Consensus 34 ~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~gL~il~e~k~~ 113 (301)
T Consensus 7 ~~~I~~G~d~~l~vIaGPCsies~~~~~~~A~~lk~~~~~~~i~~i~ra~f~Kp-rts~~~~~G~g~~~gL~~l~~i~~~ 85 (271)
T pfam00793 7 ESDILIGEDDRLLVIAGPCSIESPEAAMEYAERLKELGAKLKLPIIMRAYFEKP-RTSPVGFKGLGNDPGLKILFRVKDG 85 (271)
T ss_pred CCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC-CCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 622478799965899678804399999999999999998709508998434468-9999675188877560267757765
Q ss_pred HCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCC-CCCEEEE
Q ss_conf 287688522889999876502157882257628999999985059779983677789999999999997258-7808995
Q gi|254780669|r 114 YGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHAHG-AKDVLFC 192 (301)
Q Consensus 114 ~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~~G-n~~i~lc 192 (301)
T Consensus 86 ~glpv~TEv~~~~~~~~~~d~vd~~qIgAr~~~~~~l~~~as~~~~pV~~Kng~~~a~~~~~~a~e~~~~~G~~~~~~~~ 165 (271)
T pfam00793 86 LGLPIATEVLDPIDPQYVAEVADIGQIGARTTESQDLLEAASGTSKPVGLKRGTDLAIDEMLAAAEYHLFLGNTPGNILC 165 (271)
T ss_pred CCCCHHHHHCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 29954656527466999984176553455112589999998526984782587768999999999999985687898414
Q ss_pred ECCCCCCC--HHHCCCCCCCHHHHHHC--CCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCH
Q ss_conf 14654440--10000000106888518--716871177742122345321263889999999999718988999836983
Q gi|254780669|r 193 ERGTSFGY--NTLVTDMRSIPIMTSMG--VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDP 268 (301)
Q Consensus 193 ERG~~fgy--~~lvvD~~~i~~lk~~~--~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE~Hp~P 268 (301)
T Consensus 166 erg~r~g~~~n~~~~d~~~~~~lk~~~~~~pVivD~SH~~~~k~------~~~q~~V~~~~~aaia~Gi~GlmiEsH~~p 239 (271)
T pfam00793 166 ERGIRGGYGPNRLTLDVSAVPILKEETGHLPVMVDPSHSNGRKD------GGRQPLVPPLARAAIAVGADGLMIEVHPNP 239 (271)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC------CCCHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 68974788877776889999999973789983773643234778------766789999999999809988999803795
Q ss_pred HHCCCCCCCCCCHHHHHHH
Q ss_conf 3479782018688999999
Q gi|254780669|r 269 DNAPSDGPNMINIKDLPKL 287 (301)
Q Consensus 269 ~~AlsD~~q~l~l~~l~~l 287 (301)
T Consensus 240 ~~a~sD~~~~l~yg~sitd 258 (271)
T pfam00793 240 GNALSDGPQQLKYGVSETD 258 (271)
T ss_pred CCCCCCCCCCCCCCCCCCC
T ss_conf 5378998646779853231